MGE detailed information
MGE type: Genomic_island MGE length: 10391 bp
Accession: NZ_CP121068 Location: 1013481..1023871 Organism: Salmonella enterica subsp. enterica serovar Infantis strain R21.1575 Replicon: chromosome
Accession: NZ_CP121068 Location: 1013481..1023871 Organism: Salmonella enterica subsp. enterica serovar Infantis strain R21.1575 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P8I08_RS04810 (1008559) | 1008559..1008939 | + | 381 | WP_023993675.1 | DUF4440 domain-containing protein | - |
| P8I08_RS04815 (1008995) | 1008995..1011562 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| P8I08_RS04820 (1011721) | 1011721..1012242 | + | 522 | WP_023994250.1 | hypothetical protein | - |
| P8I08_RS04825 (1012413) | 1012413..1013069 | - | 657 | WP_000420451.1 | protein-serine/threonine phosphatase | - |
| P8I08_RS04830 (1013404) | 1013404..1013621 | + | 218 | Protein_945 | IS5 family transposase ISEcl3 | Transposase |
| P8I08_RS04835 (1013694) | 1013694..1014221 | - | 528 | WP_023994249.1 | GNAT family N-acetyltransferase | Toxin Detail |
| P8I08_RS04840 (1014218) | 1014218..1014508 | - | 291 | WP_000855694.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| P8I08_RS04845 (1014778) | 1014778..1014956 | - | 179 | Protein_948 | IS3 family transposase | - |
| P8I08_RS04850 (1015197) | 1015197..1015523 | + | 327 | WP_000393300.1 | hypothetical protein | - |
| P8I08_RS04855 (1015796) | 1015796..1016143 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| P8I08_RS04860 (1016128) | 1016128..1016577 | - | 450 | WP_000381612.1 | membrane protein | - |
| P8I08_RS04865 (1017009) | 1017009..1017452 | - | 444 | WP_023993678.1 | Type 3 secretion system pilotin | VF |
| P8I08_RS04870 (1017908) | 1017908..1018558 | + | 651 | WP_001728903.1 | Invasion protein InvF | VF |
| P8I08_RS04875 (1018555) | 1018555..1020243 | + | 1689 | WP_000848113.1 | Type 3 secretion system secretin | VF |
| P8I08_RS04880 (1020240) | 1020240..1021358 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| P8I08_RS04885 (1021383) | 1021383..1023440 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| P8I08_RS04890 (1023464) | 1023464..1023871 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| P8I08_RS04895 (1023868) | 1023868..1025163 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| P8I08_RS04900 (1025141) | 1025141..1025584 | + | 444 | WP_000555884.1 | SPI-1 type III secretion system protein SpaM | - |
| P8I08_RS04905 (1025584) | 1025584..1026594 | + | 1011 | WP_000503101.1 | SPI-1 type III secretion system protein SpaN | - |
| P8I08_RS04910 (1026594) | 1026594..1027505 | + | 912 | WP_000058741.1 | SPI-1 type III secretion system protein SpaO | - |
| P8I08_RS04915 (1027495) | 1027495..1028169 | + | 675 | WP_000526014.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| P8I08_RS04920 (1028195) | 1028195..1028455 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0.008 |