MGE detailed information
MGE type: Prophage MGE length: 56412 bp
Accession: NZ_CP120944 Location: 2565440..2621851 Organism: Escherichia coli O157:H7 str. EDL933 Replicon: chromosome
Accession: NZ_CP120944 Location: 2565440..2621851 Organism: Escherichia coli O157:H7 str. EDL933 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P7249_RS12875 (2561705) | 2561705..2562472 | - | 768 | Protein_2520 | AbgT family transporter | - |
| P7249_RS12880 (2562509) | 2562509..2563954 | - | 1446 | WP_001156434.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgB | - |
| P7249_RS12885 (2563954) | 2563954..2565264 | - | 1311 | WP_000444937.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgA | - |
| P7249_RS12890 (2565440) | 2565440..2566348 | + | 909 | WP_000885454.1 | LysR family transcriptional regulator | - |
| P7249_RS12895 (2566678) | 2566678..2567241 | + | 564 | WP_001046821.1 | DNA endonuclease SmrA | - |
| P7249_RS12900 (2567262) | 2567262..2568494 | - | 1233 | WP_000628061.1 | diguanylate cyclase DgcM | - |
| P7249_RS12905 (2568688) | 2568688..2568735 | + | 48 | WP_211180494.1 | protein YnaN | - |
| P7249_RS12910 (2568749) | 2568749..2569732 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| P7249_RS12915 (2570007) | 2570007..2570177 | + | 171 | WP_001625136.1 | protein YnaL | - |
| P7249_RS12920 (2570210) | 2570210..2571583 | + | 1374 | WP_000123746.1 | ATP-dependent RNA helicase DbpA | - |
| P7249_RS12925 (2571712) | 2571712..2572647 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| P7249_RS12930 (2572699) | 2572699..2573934 | - | 1236 | WP_000040839.1 | Putative defective protein IntQ ; Integrase | Integrase |
| P7249_RS12935 (2573936) | 2573936..2574151 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| - (2574255) | 2574255..2574433 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2574255) | 2574255..2574433 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2574255) | 2574255..2574433 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2574255) | 2574255..2574433 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| P7249_RS12940 (2574251) | 2574251..2574439 | - | 189 | WP_001302840.1 | DUF1187 family protein | - |
| P7249_RS12945 (2574477) | 2574477..2574626 | - | 150 | WP_001443846.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| P7249_RS12950 (2574682) | 2574682..2575491 | - | 810 | WP_000166313.1 | recombination protein RecT | - |
| P7249_RS12955 (2575484) | 2575484..2578084 | - | 2601 | WP_000105140.1 | exodeoxyribonuclease VIII | - |
| P7249_RS12960 (2578186) | 2578186..2578461 | - | 276 | WP_001344816.1 | hypothetical protein | - |
| P7249_RS12965 (2578536) | 2578536..2578706 | - | 171 | WP_001352098.1 | YdaE family protein | - |
| P7249_RS12970 (2578706) | 2578706..2578927 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| P7249_RS12975 (2579369) | 2579369..2579857 | + | 489 | WP_001312793.1 | superinfection exclusion B family protein | - |
| P7249_RS12980 (2579854) | 2579854..2580009 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| P7249_RS12985 (2580020) | 2580020..2580199 | - | 180 | WP_001326317.1 | hypothetical protein | - |
| P7249_RS12990 (2580442) | 2580442..2580861 | - | 420 | WP_000233319.1 | helix-turn-helix domain-containing protein | - |
| P7249_RS12995 (2580941) | 2580941..2581195 | + | 255 | WP_001072342.1 | hypothetical protein | - |
| P7249_RS13000 (2581192) | 2581192..2581614 | + | 423 | WP_000693803.1 | toxin YdaT family protein | - |
| P7249_RS13005 (2581692) | 2581692..2582480 | + | 789 | WP_001304174.1 | hypothetical protein | - |
| P7249_RS13010 (2582487) | 2582487..2583233 | + | 747 | WP_000788980.1 | ATP-binding protein | - |
| P7249_RS13015 (2583256) | 2583256..2584017 | + | 762 | WP_000450712.1 | DUF1627 domain-containing protein | - |
| P7249_RS13020 (2584033) | 2584033..2584455 | + | 423 | WP_001141110.1 | DUF977 family protein | - |
| P7249_RS13025 (2584561) | 2584561..2584773 | + | 213 | WP_000935420.1 | hypothetical protein | - |
| P7249_RS13030 (2584806) | 2584806..2585023 | + | 218 | Protein_2551 | DUF4014 family protein | - |
| P7249_RS13035 (2585025) | 2585025..2585288 | + | 264 | WP_000224233.1 | hypothetical protein | - |
| P7249_RS13040 (2585299) | 2585299..2585460 | + | 162 | WP_000208018.1 | hypothetical protein | - |
| P7249_RS13045 (2585518) | 2585518..2585622 | + | 105 | Protein_2554 | hypothetical protein | - |
| P7249_RS13050 (2586216) | 2586216..2587367 | + | 1152 | WP_001100703.1 | DNA cytosine methyltransferase | - |
| P7249_RS13055 (2587335) | 2587335..2588324 | - | 990 | WP_000016656.1 | hypothetical protein | - |
| P7249_RS13060 (2588324) | 2588324..2589715 | - | 1392 | WP_000138556.1 | ATP-binding protein | - |
| P7249_RS13065 (2590215) | 2590215..2590814 | + | 600 | WP_000940319.1 | DUF1367 family protein | - |
| P7249_RS13070 (2590814) | 2590814..2591104 | + | 291 | WP_000247761.1 | DUF1364 domain-containing protein | - |
| P7249_RS13075 (2591101) | 2591101..2591655 | + | 555 | WP_000640158.1 | DUF1133 family protein | - |
| P7249_RS13090 (2592217) | 2592217..2592648 | + | 432 | WP_000466957.1 | tellurite resistance TerB family protein | - |
| P7249_RS13095 (2592645) | 2592645..2592812 | + | 168 | WP_000216636.1 | DUF3927 family protein | - |
| P7249_RS13100 (2593223) | 2593223..2595076 | + | 1854 | WP_000143080.1 | SASA family carbohydrate esterase | - |
| P7249_RS13105 (2595226) | 2595226..2595441 | + | 216 | WP_000284522.1 | class II holin family protein | - |
| P7249_RS13110 (2595446) | 2595446..2595790 | + | 345 | WP_000731221.1 | YdfR family protein | - |
| P7249_RS13115 (2595841) | 2595841..2596374 | + | 534 | WP_000992146.1 | lysozyme | - |
| P7249_RS13120 (2596648) | 2596648..2597343 | + | 696 | WP_000661712.1 | phage antirepressor protein | - |
| P7249_RS13125 (2597438) | 2597438..2597569 | + | 132 | WP_001280923.1 | hypothetical protein | - |
| P7249_RS13130 (2597792) | 2597792..2597977 | + | 186 | WP_012817877.1 | Rz1 family lipoprotein | - |
| P7249_RS13135 (2598378) | 2598378..2598704 | + | 327 | WP_000828070.1 | TonB family protein | - |
| P7249_RS13140 (2598836) | 2598836..2599036 | - | 201 | WP_000095744.1 | YlcI/YnfO family protein | - |
| P7249_RS13145 (2599078) | 2599078..2599443 | + | 366 | WP_000829192.1 | HNH endonuclease | - |
| P7249_RS13150 (2599732) | 2599732..2600295 | + | 564 | WP_000958380.1 | terminase small subunit | - |
| P7249_RS13155 (2600292) | 2600292..2601953 | + | 1662 | WP_277857261.1 | terminase large subunit | - |
| P7249_RS13160 (2602017) | 2602017..2603954 | + | 1938 | WP_000173030.1 | phage major capsid protein | - |
| P7249_RS13165 (2603999) | 2603999..2604220 | + | 222 | WP_001063094.1 | hypothetical protein | - |
| P7249_RS13170 (2604166) | 2604166..2606750 | + | 2585 | Protein_2577 | phage portal protein | - |
| P7249_RS13175 (2606747) | 2606747..2607073 | + | 327 | WP_000125984.1 | head-tail connector protein | - |
| P7249_RS13180 (2607083) | 2607083..2607433 | + | 351 | WP_001007911.1 | phage head closure protein | - |
| P7249_RS13185 (2607430) | 2607430..2607876 | + | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| P7249_RS13190 (2607873) | 2607873..2608217 | + | 345 | WP_000133393.1 | DUF3168 domain-containing protein | - |
| P7249_RS13195 (2608286) | 2608286..2609002 | + | 717 | WP_001537075.1 | major tail subunit | - |
| P7249_RS13200 (2609008) | 2609008..2609382 | + | 375 | WP_001030063.1 | phage tail assembly chaperone | - |
| P7249_RS13205 (2609478) | 2609478..2609687 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| P7249_RS13210 (2609739) | 2609739..2612819 | + | 3081 | WP_000212768.1 | phage tail tape measure protein | - |
| P7249_RS13215 (2612812) | 2612812..2613153 | + | 342 | WP_000807964.1 | phage tail protein | - |
| P7249_RS13220 (2613153) | 2613153..2613851 | + | 699 | WP_001152159.1 | phage minor tail protein L | - |
| P7249_RS13225 (2613862) | 2613862..2614605 | + | 744 | WP_000194763.1 | C40 family peptidase | - |
| P7249_RS13230 (2614602) | 2614602..2615183 | + | 582 | WP_001089974.1 | tail assembly protein | - |
| P7249_RS13235 (2615374) | 2615374..2615901 | - | 528 | WP_000649830.1 | Superoxide dismutase [Cu-Zn] 1 | VF |
| P7249_RS13240 (2616035) | 2616035..2619532 | + | 3498 | WP_000515042.1 | host specificity protein J | - |
| P7249_RS13245 (2619603) | 2619603..2620202 | + | 600 | WP_001230550.1 | Outer membrane protein X | VF |
| P7249_RS13250 (2620267) | 2620267..2621580 | + | 1314 | WP_000268955.1 | ISNCY family transposase KIS | Transposase |
| P7249_RS13255 (2621582) | 2621582..2621851 | + | 270 | WP_001023992.1 | phage tail fiber C-terminal domain-containing protein | - |
| P7249_RS13260 (2621964) | 2621964..2622539 | + | 576 | WP_001131659.1 | DUF1076 domain-containing protein | - |
| P7249_RS13265 (2622612) | 2622612..2623241 | + | 630 | WP_001443810.1 | DUF1076 domain-containing protein | - |
| P7249_RS13270 (2623323) | 2623323..2623964 | + | 642 | WP_001143784.1 | DUF1076 domain-containing protein | - |
| P7249_RS13275 (2624545) | 2624545..2624979 | - | 435 | WP_001295593.1 | universal stress protein UspF | - |
| P7249_RS13280 (2625120) | 2625120..2626233 | - | 1114 | Protein_2599 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Prophage | TA10219 | NC_002695 | 1921609..1970151 | 0.008 |