MGE detailed information
MGE type: Genomic_island MGE length: 11356 bp
Accession: NZ_CP120837 Location: 834395..845750 Organism: Salmonella enterica subsp. enterica strain 21A Replicon: chromosome
Accession: NZ_CP120837 Location: 834395..845750 Organism: Salmonella enterica subsp. enterica strain 21A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P4B21_RS03990 (829841) | 829841..830939 | + | 1099 | WP_096059418.1 | peptide chain release factor 2 | - |
| P4B21_RS03995 (830949) | 830949..832466 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| P4B21_RS04000 (832542) | 832542..833087 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| P4B21_RS04005 (833352) | 833352..834110 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| P4B21_RS04015 (834395) | 834395..835201 | - | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| P4B21_RS04020 (835481) | 835481..835732 | - | 252 | WP_001576352.1 | hypothetical protein | - |
| P4B21_RS04025 (835941) | 835941..836168 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| P4B21_RS04030 (836168) | 836168..836566 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| P4B21_RS04035 (837374) | 837374..837910 | + | 537 | WP_001038502.1 | Attachment invasion locus protein | VF |
| P4B21_RS04040 (837957) | 837957..838589 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| P4B21_RS04045 (839308) | 839308..839889 | + | 582 | WP_001244651.1 | putative fimbrial-like protein YbgD | VF |
| P4B21_RS04050 (840009) | 840009..842492 | + | 2484 | WP_000705505.1 | Outer membrane usher protein PapC | VF |
| P4B21_RS04055 (842533) | 842533..843276 | + | 744 | WP_000798504.1 | Chaperone protein PapD | VF |
| P4B21_RS04060 (843273) | 843273..844349 | + | 1077 | WP_000141330.1 | hypothetical protein | - |
| P4B21_RS04065 (844493) | 844493..845005 | + | 513 | WP_000336257.1 | CaiF/GrlA family transcriptional regulator | - |
| P4B21_RS04070 (844992) | 844992..845750 | + | 759 | WP_000134802.1 | transcriptional regulator | - |
| P4B21_RS04075 (845960) | 845960..846808 | - | 849 | WP_000503687.1 | nickel/cobalt efflux protein RcnA | - |
| P4B21_RS04080 (846930) | 846930..847202 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| P4B21_RS04085 (847233) | 847233..848462 | - | 1230 | WP_000036838.1 | amino acid permease | - |
| P4B21_RS04090 (848604) | 848604..849059 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| P4B21_RS04095 (849163) | 849163..850026 | + | 864 | WP_001270774.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0.009 |