MGE detailed information
MGE type: Genomic_island MGE length: 11705 bp
Accession: NZ_CP120568 Location: 2457203..2468907 Organism: Escherichia coli strain 582 Replicon: chromosome
Accession: NZ_CP120568 Location: 2457203..2468907 Organism: Escherichia coli strain 582 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P5711_RS12030 (2452220) | 2452220..2453212 | - | 993 | WP_001222721.1 | autoinducer 2 ABC transporter permease LsrD | - |
| P5711_RS12035 (2453212) | 2453212..2454240 | - | 1029 | WP_000911184.1 | autoinducer 2 ABC transporter permease LsrC | - |
| P5711_RS12040 (2454234) | 2454234..2455769 | - | 1536 | WP_001194860.1 | autoinducer 2 ABC transporter ATP-binding protein LsrA | - |
| P5711_RS12045 (2456018) | 2456018..2456971 | + | 954 | WP_000154342.1 | transcriptional regulator LsrR | - |
| P5711_RS12050 (2457203) | 2457203..2457469 | + | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| P5711_RS12055 (2457469) | 2457469..2458791 | + | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| P5711_RS12060 (2459103) | 2459103..2459311 | + | 209 | Protein_2357 | AraC family transcriptional regulator | - |
| P5711_RS12065 (2459566) | 2459566..2460792 | + | 1227 | Protein_2358 | Outer membrane usher protein FimD | VF |
| P5711_RS12070 (2460806) | 2460806..2461720 | + | 915 | WP_277686067.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| P5711_RS12075 (2462054) | 2462054..2464333 | + | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| P5711_RS12080 (2464581) | 2464581..2464778 | + | 198 | WP_000543384.1 | two-component system connector SafA | - |
| P5711_RS12085 (2464853) | 2464853..2465614 | + | 762 | WP_000060492.1 | acid stress response transcriptional regulator YdeO | - |
| P5711_RS12090 (2466016) | 2466016..2467698 | + | 1683 | WP_001295684.1 | sulfatase | - |
| P5711_RS12095 (2467750) | 2467750..2468907 | + | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| P5711_RS12100 (2468873) | 2468873..2468995 | - | 123 | WP_120795387.1 | protein YneP | - |
| P5711_RS12105 (2469198) | 2469198..2470883 | + | 1686 | WP_000628576.1 | ABC transporter ATP-binding protein/permease | - |
| P5711_RS12110 (2470921) | 2470921..2473293 | + | 2373 | WP_000832437.1 | TonB-dependent receptor plug domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20025 | CP009789 | 1561271..1572871 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20066 | HG738867 | 1469371..1480971 | 0.006 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1040 | NC_000913 | 1580842..1592442 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21437 | NC_007779 | 1582556..1594156 | 0.006 | |
| Escherichia coli HS | Genomic island | TA22421 | NC_009800 | 1597665..1609265 | 0.007 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22685 | NC_010473 | 1669461..1680091 | 0.008 | |
| Escherichia coli BW2952 | Genomic island | TA23853 | NC_012759 | 1470925..1482525 | 0.006 | |
| Escherichia coli DH1 | Genomic island | TA27403 | NC_017638 | 1563024..1574624 | 0.006 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29002 | NC_020518 | 1287669..1299269 | 0.006 | |
| Escherichia coli BW25113 | Genomic island | TA48682 | NZ_CP009273 | 1575099..1586699 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68424 | NZ_CP017979 | 1484612..1496212 | 0.006 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90478 | NZ_CP025520 | 438284..449884 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285016 | NZ_HG738867 | 1469371..1480971 | 0.006 |