MGE detailed information
MGE type: Conjugative plasmid MGE length: 95480 bp
Accession: NZ_CP120559 Location: 1..95480 Organism: Escherichia coli strain B771 Replicon: plasmid pB771_95480
Accession: NZ_CP120559 Location: 1..95480 Organism: Escherichia coli strain B771 Replicon: plasmid pB771_95480
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P5709_RS25650 (1069) | 1069..1725 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| P5709_RS25655 (1710) | 1710..2270 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| P5709_RS25660 (2280) | 2280..2894 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| P5709_RS25665 (2912) | 2912..4009 | - | 1098 | WP_001208805.1 | hypothetical protein | VF |
| P5709_RS25670 (4022) | 4022..5575 | - | 1554 | WP_000362202.1 | hypothetical protein | VF |
| P5709_RS25675 (5586) | 5586..6038 | - | 453 | WP_001247336.1 | hypothetical protein | VF |
| P5709_RS25680 (6025) | 6025..7320 | - | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| P5709_RS25685 (7313) | 7313..8995 | - | 1683 | WP_000748143.1 | hypothetical protein | VF |
| P5709_RS25690 (9009) | 9009..9446 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| P5709_RS25695 (9446) | 9446..10513 | - | 1068 | WP_000742600.1 | hypothetical protein | VF |
| P5709_RS25700 (11187) | 11187..11639 | - | 453 | WP_000008893.1 | hypothetical protein | - |
| P5709_RS25705 (11682) | 11682..11936 | - | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| P5709_RS25710 (12204) | 12204..12770 | - | 567 | WP_000776428.1 | protein TraD | - |
| P5709_RS25715 (12784) | 12784..13467 | - | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| P5709_RS25720 (13721) | 13721..14254 | - | 534 | WP_001303319.1 | transcription termination/antitermination NusG family protein | - |
| P5709_RS25725 (14696) | 14696..14983 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| P5709_RS25730 (14901) | 14901..15131 | - | 231 | WP_228772074.1 | ash family protein | - |
| P5709_RS25735 (16137) | 16137..17168 | + | 1032 | WP_000907875.1 | plasmid replication initiator RepA | - |
| P5709_RS25740 (18074) | 18074..18358 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| P5709_RS25745 (18358) | 18358..18633 | + | 276 | WP_001582571.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| P5709_RS25750 (18739) | 18739..18942 | + | 204 | Protein_21 | hypothetical protein | - |
| P5709_RS25755 (19212) | 19212..19478 | - | 267 | WP_000627829.1 | hypothetical protein | - |
| P5709_RS25760 (19478) | 19478..19972 | - | 495 | WP_001582574.1 | hypothetical protein | - |
| P5709_RS25765 (20028) | 20028..20630 | - | 603 | WP_000517695.1 | ProQ/FINO family protein | - |
| P5709_RS25770 (20984) | 20984..22399 | + | 1416 | WP_029397060.1 | protein YagA | - |
| P5709_RS25775 (22323) | 22323..25328 | - | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| P5709_RS25780 (25492) | 25492..26049 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| P5709_RS25785 (26232) | 26232..27092 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| P5709_RS25790 (27564) | 27564..29444 | + | 1881 | WP_001619592.1 | colicin Ia central receptor-binding domain-containing protein | - |
| P5709_RS25795 (29466) | 29466..29801 | - | 336 | WP_001080734.1 | colicin 1A immunity protein | - |
| P5709_RS25800 (29930) | 29930..30277 | + | 348 | WP_001582578.1 | DUF6404 family protein | - |
| P5709_RS25805 (30297) | 30297..30887 | - | 591 | WP_000194572.1 | hypothetical protein | - |
| P5709_RS25810 (30887) | 30887..31141 | - | 255 | WP_000343103.1 | hypothetical protein | - |
| P5709_RS25815 (31710) | 31710..32123 | + | 414 | WP_000465043.1 | hypothetical protein | - |
| P5709_RS25820 (32125) | 32125..32904 | + | 780 | WP_001164201.1 | site-specific integrase | - |
| P5709_RS25825 (33084) | 33084..33728 | + | 645 | WP_001144036.1 | ParA family protein | - |
| P5709_RS25830 (33815) | 33815..34123 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| P5709_RS25835 (34536) | 34536..35516 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| P5709_RS25840 (35509) | 35509..35925 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| P5709_RS25845 (35927) | 35927..37201 | - | 1275 | WP_000457524.1 | Y-family DNA polymerase | - |
| P5709_RS25850 (37201) | 37201..37638 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| P5709_RS25855 (37635) | 37635..37883 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| P5709_RS25860 (38301) | 38301..39203 | + | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| P5709_RS25865 (39200) | 39200..39511 | + | 312 | WP_031942433.1 | hypothetical protein | - |
| P5709_RS25870 (39587) | 39587..40270 | + | 684 | WP_000086147.1 | DNA methylase | - |
| P5709_RS25875 (40271) | 40271..40492 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| P5709_RS25880 (40506) | 40506..40940 | + | 435 | WP_000274500.1 | DUF1380 family protein | - |
| P5709_RS25885 (40986) | 40986..41762 | + | 777 | WP_001005023.1 | hypothetical protein | - |
| P5709_RS25890 (41836) | 41836..42948 | + | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| P5709_RS25895 (43524) | 43524..43949 | + | 426 | WP_001619600.1 | antirestriction protein | - |
| P5709_RS25900 (43996) | 43996..44418 | + | 423 | WP_001619601.1 | DUF1380 family protein | - |
| P5709_RS25905 (44415) | 44415..44606 | + | 192 | WP_001027500.1 | hypothetical protein | - |
| P5709_RS25910 (44677) | 44677..44991 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| P5709_RS25915 (45375) | 45375..45902 | + | 528 | WP_001276107.1 | single-stranded DNA-binding protein | - |
| P5709_RS25920 (45960) | 45960..46193 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| P5709_RS25925 (46252) | 46252..48210 | + | 1959 | WP_001145485.1 | ParB/RepB/Spo0J family partition protein | - |
| P5709_RS25930 (48265) | 48265..48699 | + | 435 | WP_001387500.1 | conjugation system SOS inhibitor PsiB | - |
| P5709_RS25935 (48696) | 48696..49415 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| P5709_RS25940 (49412) | 49412..50008 | + | 597 | WP_000977997.1 | hypothetical protein | - |
| P5709_RS25945 (50470) | 50470..50970 | + | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| P5709_RS25950 (51699) | 51699..52133 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| P5709_RS25955 (52227) | 52227..52493 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| P5709_RS25960 (52558) | 52558..53496 | + | 939 | WP_000078704.1 | ISNCY family transposase ISRor2 | VF |
| P5709_RS25965 (53519) | 53519..53716 | + | 198 | WP_001348086.1 | hypothetical protein | - |
| P5709_RS25970 (53747) | 53747..53998 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| P5709_RS25975 (54578) | 54578..55426 | + | 849 | WP_001077023.1 | DUF4942 domain-containing protein | - |
| P5709_RS25980 (55512) | 55512..55847 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| P5709_RS25985 (56080) | 56080..56412 | + | 333 | WP_001281051.1 | plasmid mobilization protein MobA | - |
| P5709_RS25990 (56423) | 56423..59122 | + | 2700 | WP_001354015.1 | hypothetical protein | Relaxase |
| P5709_RS25995 (59159) | 59159..61450 | - | 2292 | WP_001289276.1 | F-type conjugative transfer protein TrbC | - |
| P5709_RS26000 (61443) | 61443..62513 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| P5709_RS26005 (62532) | 62532..63740 | - | 1209 | WP_000121274.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (63920) | 63920..63977 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (63920) | 63920..63977 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (63920) | 63920..63977 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (63920) | 63920..63977 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| P5709_RS26010 (64032) | 64032..64184 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| P5709_RS26015 (65008) | 65008..65103 | + | 96 | WP_000609148.1 | DinQ-like type I toxin DqlB | - |
| P5709_RS26020 (65168) | 65168..65344 | - | 177 | WP_001054904.1 | hypothetical protein | - |
| P5709_RS26025 (65736) | 65736..65945 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| P5709_RS26030 (66017) | 66017..66679 | - | 663 | WP_000653334.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| P5709_RS26035 (66744) | 66744..68906 | - | 2163 | WP_000698351.1 | DotA/TraY family protein | - |
| P5709_RS26040 (69003) | 69003..69587 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| P5709_RS26045 (69616) | 69616..70818 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| P5709_RS26050 (70785) | 70785..71399 | - | 615 | WP_000337398.1 | IncI1-type conjugal transfer protein TraV | - |
| P5709_RS26055 (71399) | 71399..74443 | - | 3045 | WP_001024780.1 | IncI1-type conjugal transfer protein TraU | - |
| P5709_RS26060 (74533) | 74533..75333 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| P5709_RS26065 (75477) | 75477..76690 | + | 1214 | WP_277715439.1 | IS3 family transposase IS629 | Transposase |
| P5709_RS26070 (76735) | 76735..76818 | - | 84 | Protein_85 | putative conjugal transfer protein TraS | - |
| P5709_RS26075 (76882) | 76882..77286 | - | 405 | WP_000086957.1 | IncI1-type conjugal transfer protein TraR | - |
| P5709_RS26080 (77337) | 77337..77864 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| P5709_RS26085 (77864) | 77864..78568 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| P5709_RS26090 (78568) | 78568..79857 | - | 1290 | WP_001272005.1 | conjugal transfer protein TraO | - |
| P5709_RS26095 (79860) | 79860..80843 | - | 984 | WP_001191877.1 | hypothetical protein | VF |
| P5709_RS26100 (80854) | 80854..81546 | - | 693 | WP_000138548.1 | DotI/IcmL family type IV secretion protein | - |
| P5709_RS26105 (81543) | 81543..81890 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| P5709_RS26110 (81908) | 81908..85675 | - | 3768 | WP_001141529.1 | DUF5710 domain-containing protein | - |
| P5709_RS26115 (85765) | 85765..86316 | - | 552 | WP_000014583.1 | Phospholipase D | VF |
| P5709_RS26120 (86331) | 86331..86621 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| P5709_RS26125 (86618) | 86618..87766 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| P5709_RS26130 (87763) | 87763..88581 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| P5709_RS26135 (88578) | 88578..89036 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| P5709_RS26140 (89431) | 89431..90015 | - | 585 | WP_277715440.1 | histidine phosphatase family protein | - |
| P5709_RS26145 (90075) | 90075..91277 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| P5709_RS26150 (91362) | 91362..92186 | - | 825 | WP_001238939.1 | conjugal transfer protein TraE | - |
| P5709_RS26155 (92337) | 92337..93491 | - | 1155 | WP_001139957.1 | site-specific integrase | - |
| P5709_RS26160 (95012) | 95012..95260 | + | 249 | WP_001349157.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|