MGE detailed information
MGE type: Genomic_island MGE length: 36111 bp
Accession: NZ_CP120557 Location: 4400642..4436752 Organism: Escherichia coli strain B771 Replicon: chromosome
Accession: NZ_CP120557 Location: 4400642..4436752 Organism: Escherichia coli strain B771 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P5709_RS21360 (4396583) | 4396583..4398433 | - | 1851 | WP_000393832.1 | type VI secretion system baseplate subunit TssF | - |
| P5709_RS21365 (4398437) | 4398437..4398850 | - | 414 | WP_000611742.1 | type VI secretion system baseplate subunit TssE | - |
| P5709_RS21370 (4398857) | 4398857..4400332 | - | 1476 | WP_000056989.1 | type VI secretion system contractile sheath large subunit | - |
| P5709_RS21375 (4400383) | 4400383..4400607 | - | 225 | WP_000123970.1 | hypothetical protein | - |
| P5709_RS21380 (4400642) | 4400642..4401019 | - | 378 | Protein_4178 | hypothetical protein | VF |
| P5709_RS21385 (4401020) | 4401020..4402429 | + | 1410 | Protein_4179 | hypothetical protein | VF |
| P5709_RS21390 (4402407) | 4402407..4402625 | + | 219 | WP_001101841.1 | hypothetical protein | - |
| P5709_RS21395 (4402622) | 4402622..4402798 | + | 177 | WP_000008098.1 | hypothetical protein | - |
| P5709_RS21400 (4403229) | 4403229..4404365 | + | 1137 | WP_000420818.1 | ISAs1 family transposase ISEc1 | Transposase |
| P5709_RS21405 (4404406) | 4404406..4405176 | - | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| P5709_RS21410 (4405357) | 4405357..4405803 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| P5709_RS21415 (4405846) | 4405846..4408290 | - | 2445 | WP_029490242.1 | Acyl-coenzyme A dehydrogenase | VF |
| P5709_RS21420 (4408530) | 4408530..4409108 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| P5709_RS21425 (4409314) | 4409314..4410081 | + | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| P5709_RS21430 (4410052) | 4410052..4410792 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| P5709_RS21435 (4410948) | 4410948..4411226 | - | 279 | WP_000615981.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| P5709_RS21440 (4411229) | 4411229..4411489 | - | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| P5709_RS21445 (4411675) | 4411675..4412448 | + | 774 | WP_001353765.1 | hypothetical protein | VF |
| P5709_RS21450 (4412624) | 4412624..4413121 | + | 498 | WP_000006260.1 | REP-associated tyrosine transposase RayT | - |
| P5709_RS21455 (4413337) | 4413337..4415049 | - | 1713 | Protein_4193 | Flagellar biosynthesis protein FlhA | VF |
| P5709_RS21460 (4415021) | 4415021..4415806 | + | 786 | WP_000207564.1 | Chemotaxis protein LafU | VF |
| P5709_RS21465 (4415877) | 4415877..4416932 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| P5709_RS21470 (4416984) | 4416984..4417277 | + | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| P5709_RS21475 (4417280) | 4417280..4417678 | + | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| P5709_RS21480 (4417688) | 4417688..4418140 | + | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| P5709_RS21485 (4418386) | 4418386..4418589 | + | 204 | Protein_4199 | RtcB family protein | - |
| P5709_RS21490 (4418588) | 4418588..4419109 | + | 522 | Protein_4200 | peptide chain release factor H | - |
| P5709_RS21495 (4419166) | 4419166..4420623 | - | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| P5709_RS21500 (4420884) | 4420884..4421342 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| - (4421938) | 4421938..4422018 | + | 81 | NuclAT_13 | - | - |
| - (4421938) | 4421938..4422018 | + | 81 | NuclAT_13 | - | - |
| - (4421938) | 4421938..4422018 | + | 81 | NuclAT_13 | - | - |
| - (4421938) | 4421938..4422018 | + | 81 | NuclAT_13 | - | - |
| P5709_RS21505 (4421434) | 4421434..4422678 | + | 1245 | WP_000189541.1 | esterase FrsA | - |
| P5709_RS21510 (4422736) | 4422736..4423137 | + | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| P5709_RS21515 (4423176) | 4423176..4424231 | - | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| P5709_RS21520 (4424519) | 4424519..4425622 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| P5709_RS21525 (4425634) | 4425634..4426887 | + | 1254 | WP_000893272.1 | glutamate-5-semialdehyde dehydrogenase | - |
| P5709_RS21535 (4427388) | 4427388..4427984 | + | 597 | WP_021519319.1 | hypothetical protein | - |
| P5709_RS21540 (4428077) | 4428077..4429708 | - | 1632 | WP_032259695.1 | hypothetical protein | - |
| P5709_RS21545 (4430399) | 4430399..4430626 | + | 228 | WP_000266639.1 | AlpA family phage regulatory protein | - |
| P5709_RS21550 (4430732) | 4430732..4430956 | + | 225 | Protein_4211 | DUF3987 domain-containing protein | - |
| P5709_RS21555 (4431208) | 4431208..4432641 | + | 1434 | WP_053274573.1 | YfjI family protein | - |
| P5709_RS21560 (4433607) | 4433607..4434170 | + | 564 | WP_032259696.1 | inovirus-type Gp2 protein | - |
| P5709_RS21565 (4434496) | 4434496..4435830 | - | 1335 | Protein_4214 | hypothetical protein | VF |
| P5709_RS21570 (4436324) | 4436324..4436443 | - | 120 | Protein_4215 | IS481 family transposase ISKpn28 | Transposase |
| P5709_RS21575 (4436522) | 4436522..4436752 | - | 231 | Protein_4216 | IS4 family transposase ISSfl1 | Transposase |
| P5709_RS21580 (4436896) | 4436896..4438005 | - | 1110 | WP_016243364.1 | sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC | - |
| P5709_RS21585 (4438362) | 4438362..4439594 | + | 1233 | WP_000742442.1 | maltodextrin ABC transporter substrate-binding protein | - |
| P5709_RS21590 (4439657) | 4439657..4440964 | + | 1308 | WP_000022200.1 | sugar ABC transporter permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|