MGE detailed information
MGE type: Genomic_island MGE length: 26078 bp
Accession: NZ_CP120396 Location: 639358..665435 Organism: Salmonella enterica subsp. enterica serovar Typhi strain 1521-2017_CO_04 Replicon: chromosome
Accession: NZ_CP120396 Location: 639358..665435 Organism: Salmonella enterica subsp. enterica serovar Typhi strain 1521-2017_CO_04 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PVA80_RS02910 (PVA80_02910) | 635134..635787 | + | 654 | WP_077905085.1 | molecular chaperone | - |
| PVA80_RS02915 (PVA80_02915) | 635871..637271 | - | 1401 | WP_000773796.1 | DUF1996 domain-containing protein | - |
| PVA80_RS02920 (PVA80_02920) | 637575..638480 | + | 906 | WP_001268195.1 | YjiK family protein | - |
| PVA80_RS02925 (PVA80_02925) | 638767..639111 | - | 345 | WP_100680417.1 | Ig-like domain-containing protein | - |
| PVA80_RS02930 (PVA80_02930) | 639119..639335 | - | 217 | Protein_570 | hypothetical protein | - |
| PVA80_RS02935 (PVA80_02935) | 639358..639645 | - | 288 | WP_001269916.1 | hypothetical protein | VF |
| PVA80_RS02940 (PVA80_02940) | 639642..640517 | - | 876 | WP_000921674.1 | HTH-type transcriptional regulator GadX | VF |
| PVA80_RS02945 (PVA80_02945) | 640783..641005 | - | 223 | Protein_573 | hypothetical protein | - |
| PVA80_RS02950 (PVA80_02950) | 641322..641615 | + | 294 | WP_001110456.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| PVA80_RS02955 (PVA80_02955) | 641612..642103 | + | 492 | WP_000626103.1 | GNAT family N-acetyltransferase | Toxin Detail |
| PVA80_RS02960 (PVA80_02960) | 642344..643096 | - | 753 | WP_001785756.1 | non-specific acid phosphatase | - |
| PVA80_RS02965 (PVA80_02965) | 643196..643273 | - | 78 | Protein_577 | porin family protein | - |
| PVA80_RS02970 (PVA80_02970) | 643671..643727 | + | 57 | WP_285238976.1 | helix-turn-helix domain-containing protein | - |
| PVA80_RS02975 (PVA80_02975) | 644073..644399 | - | 327 | WP_001546501.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PVA80_RS02980 (PVA80_02980) | 644396..644659 | - | 264 | WP_001143297.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| PVA80_RS02985 (PVA80_02985) | 644731..645597 | - | 867 | WP_057492841.1 | DUF4942 domain-containing protein | - |
| PVA80_RS02990 (PVA80_02990) | 645682..645924 | - | 243 | WP_072195452.1 | DUF957 domain-containing protein | - |
| PVA80_RS02995 (PVA80_02995) | 645891..646379 | - | 489 | WP_001546482.1 | DUF5983 family protein | - |
| PVA80_RS03000 (PVA80_03000) | 646376..646753 | - | 378 | WP_057492839.1 | type IV toxin-antitoxin system cytoskeleton-binding toxin CbtA | Toxin Detail |
| PVA80_RS03005 (PVA80_03005) | 646843..647211 | - | 369 | WP_057492837.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| PVA80_RS03010 (PVA80_03010) | 647291..647512 | - | 222 | WP_000692303.1 | DUF987 domain-containing protein | - |
| PVA80_RS03015 (PVA80_03015) | 647581..648057 | - | 477 | WP_057492835.1 | RadC family protein | - |
| PVA80_RS03020 (PVA80_03020) | 648073..648558 | - | 486 | WP_057492833.1 | antirestriction protein | - |
| PVA80_RS03025 (PVA80_03025) | 648650..649468 | - | 819 | WP_057492831.1 | DUF932 domain-containing protein | - |
| PVA80_RS03030 (PVA80_03030) | 649558..649708 | - | 151 | Protein_590 | DUF905 family protein | - |
| PVA80_RS03035 (PVA80_03035) | 649834..650370 | - | 537 | WP_047628209.1 | DUF4234 domain-containing protein | - |
| PVA80_RS03040 (PVA80_03040) | 650433..651734 | - | 1302 | WP_170989464.1 | hypothetical protein | - |
| PVA80_RS03045 (PVA80_03045) | 651777..652457 | - | 681 | WP_001282912.1 | WYL domain-containing protein | - |
| PVA80_RS03050 (PVA80_03050) | 652660..653544 | - | 885 | WP_057492827.1 | 50S ribosome-binding GTPase | - |
| PVA80_RS03055 (PVA80_03055) | 653658..654620 | + | 963 | WP_057492825.1 | hypothetical protein | - |
| PVA80_RS03060 (PVA80_03060) | 654677..655480 | - | 804 | WP_057492823.1 | hypothetical protein | - |
| PVA80_RS03065 (PVA80_03065) | 657521..658252 | + | 732 | WP_057492821.1 | inovirus Gp2 family protein | - |
| PVA80_RS03070 (PVA80_03070) | 658826..660616 | + | 1791 | WP_057492819.1 | AAA family ATPase | - |
| PVA80_RS03075 (PVA80_03075) | 660725..661763 | - | 1039 | Protein_599 | IS481 family transposase | - |
| PVA80_RS03080 (PVA80_03080) | 662926..663492 | + | 567 | WP_057492815.1 | inovirus-type Gp2 protein | - |
| PVA80_RS03085 (PVA80_03085) | 663740..664300 | + | 561 | WP_057492812.1 | hypothetical protein | - |
| PVA80_RS03090 (PVA80_03090) | 664369..664605 | + | 237 | WP_000958091.1 | AlpA family transcriptional regulator | - |
| PVA80_RS03095 (PVA80_03095) | 664887..665435 | + | 549 | WP_057492810.1 | hypothetical protein | - |
| PVA80_RS03100 (PVA80_03100) | 665437..665952 | - | 516 | WP_001545309.1 | ProQ/FinO family protein | - |
| PVA80_RS03105 (PVA80_03105) | 666151..666237 | + | 87 | Protein_605 | hypothetical protein | - |
| PVA80_RS03110 (PVA80_03110) | 666702..666905 | - | 204 | WP_057492808.1 | DUF1187 family protein | - |
| PVA80_RS03115 (PVA80_03115) | 667154..667312 | - | 159 | WP_159419678.1 | hypothetical protein | - |
| PVA80_RS03120 (PVA80_03120) | 667910..668407 | + | 498 | WP_000098939.1 | type VI secretion system contractile sheath small subunit | - |
| PVA80_RS03125 (PVA80_03125) | 668429..669973 | + | 1545 | WP_057492806.1 | type VI secretion system contractile sheath large subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|