MGE detailed information
MGE type: Genomic_island MGE length: 10611 bp
Accession: NZ_CP120322 Location: 3907882..3918492 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain PS_Ent_1_2022 Replicon: chromosome
Accession: NZ_CP120322 Location: 3907882..3918492 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain PS_Ent_1_2022 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P1705_RS19160 (3903828) | 3903828..3904283 | + | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| P1705_RS19165 (3904425) | 3904425..3905654 | + | 1230 | WP_000036838.1 | amino acid permease | - |
| P1705_RS19170 (3905685) | 3905685..3905957 | - | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| P1705_RS19175 (3906079) | 3906079..3906927 | + | 849 | WP_000503687.1 | nickel/cobalt efflux protein RcnA | - |
| P1705_RS19180 (3907137) | 3907137..3907895 | - | 759 | WP_000134802.1 | transcriptional regulator | - |
| P1705_RS19185 (3907882) | 3907882..3908394 | - | 513 | WP_000336257.1 | CaiF/GrlA family transcriptional regulator | - |
| P1705_RS19190 (3908538) | 3908538..3909614 | - | 1077 | WP_000141330.1 | hypothetical protein | - |
| P1705_RS19195 (3909611) | 3909611..3910354 | - | 744 | WP_000798504.1 | Chaperone protein PapD | VF |
| P1705_RS19200 (3910395) | 3910395..3912878 | - | 2484 | WP_000705505.1 | Outer membrane usher protein PapC | VF |
| P1705_RS19205 (3912998) | 3912998..3913579 | - | 582 | WP_001244651.1 | putative fimbrial-like protein YbgD | VF |
| P1705_RS19210 (3914298) | 3914298..3914930 | - | 633 | WP_000835265.1 | YfdX family protein | - |
| P1705_RS19215 (3914977) | 3914977..3915513 | - | 537 | WP_001038502.1 | Attachment invasion locus protein | VF |
| P1705_RS19220 (3916321) | 3916321..3916719 | - | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| P1705_RS19225 (3916719) | 3916719..3916946 | - | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| P1705_RS19230 (3917155) | 3917155..3917406 | + | 252 | WP_001576352.1 | hypothetical protein | - |
| P1705_RS19235 (3917686) | 3917686..3918492 | + | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| P1705_RS19245 (3918777) | 3918777..3919535 | - | 759 | WP_000244328.1 | amidase activator ActS | - |
| P1705_RS19250 (3919800) | 3919800..3920345 | + | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| P1705_RS19255 (3920421) | 3920421..3921939 | - | 1519 | Protein_3725 | lysine--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA25956 | NC_016810 | 3207430..3218010 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26056 | NC_016856 | 3205849..3216429 | 0.009 |