MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 80662 bp
Accession: NZ_CP119745 Location: 1..80662 Organism: Escherichia coli strain E94 Replicon: plasmid pE94-5
Accession: NZ_CP119745 Location: 1..80662 Organism: Escherichia coli strain E94 Replicon: plasmid pE94-5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P1J23_RS28630 (P1J23_28630) | 216..623 | + | 408 | Protein_1 | IS66-like element accessory protein TnpA | - |
| P1J23_RS28635 (P1J23_28635) | 697..1646 | - | 950 | Protein_2 | IS3 family transposase IS629 | Transposase |
| P1J23_RS28640 (P1J23_28640) | 1676..3247 | - | 1572 | Protein_3 | IS66 family transposase | - |
| P1J23_RS28645 (P1J23_28645) | 3267..3614 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| P1J23_RS28650 (P1J23_28650) | 3614..4291 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| P1J23_RS28655 (P1J23_28655) | 4345..4617 | - | 273 | Protein_6 | IS3 family transposase IS1203 | Transposase |
| P1J23_RS28660 (P1J23_28660) | 4731..6257 | + | 1527 | WP_276171345.1 | IS66 family transposase ISEc23 | Transposase |
| P1J23_RS28665 (P1J23_28665) | 6287..6484 | - | 198 | Protein_8 | hypothetical protein | - |
| P1J23_RS28670 (P1J23_28670) | 6535..7088 | - | 554 | Protein_9 | DUF1380 family protein | - |
| P1J23_RS28675 (P1J23_28675) | 6982..7203 | - | 222 | WP_001104902.1 | hypothetical protein | - |
| P1J23_RS28680 (P1J23_28680) | 7204..7887 | - | 684 | WP_169030096.1 | DNA methylase | - |
| P1J23_RS28685 (P1J23_28685) | 7964..8266 | - | 303 | WP_169030101.1 | hypothetical protein | - |
| P1J23_RS28690 (P1J23_28690) | 8406..9368 | + | 963 | WP_169030097.1 | plasmid segregation protein ParM | - |
| P1J23_RS28695 (P1J23_28695) | 9371..9721 | + | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| P1J23_RS28700 (P1J23_28700) | 9893..10249 | + | 357 | WP_169030095.1 | hypothetical protein | - |
| P1J23_RS28705 (P1J23_28705) | 10521..11066 | - | 546 | WP_236448444.1 | hypothetical protein | - |
| P1J23_RS28710 (P1J23_28710) | 11137..11315 | - | 179 | Protein_17 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| P1J23_RS28715 (P1J23_28715) | 11387..11665 | - | 279 | WP_244462184.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| P1J23_RS28720 (P1J23_28720) | 11665..11934 | - | 270 | WP_000079931.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| P1J23_RS28725 (P1J23_28725) | 12007..12147 | - | 141 | WP_000829596.1 | hypothetical protein | - |
| P1J23_RS28730 (P1J23_28730) | 12848..13705 | - | 858 | WP_024236927.1 | incFII family plasmid replication initiator RepA | - |
| P1J23_RS28735 (P1J23_28735) | 13698..13772 | - | 75 | WP_001375168.1 | RepA leader peptide Tap | - |
| P1J23_RS28740 (P1J23_28740) | 14009..14263 | - | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| P1J23_RS28745 (P1J23_28745) | 14503..15093 | - | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| P1J23_RS28750 (P1J23_28750) | 15131..15340 | - | 210 | WP_001610317.1 | hemolysin expression modulator Hha | - |
| P1J23_RS28755 (P1J23_28755) | 15386..15847 | - | 462 | WP_001233868.1 | thermonuclease family protein | - |
| P1J23_RS28760 (P1J23_28760) | 16049..16300 | - | 252 | WP_001372275.1 | hypothetical protein | - |
| P1J23_RS28765 (P1J23_28765) | 16432..16992 | - | 561 | WP_001610319.1 | fertility inhibition protein FinO | - |
| P1J23_RS28770 (P1J23_28770) | 17095..17955 | - | 861 | WP_000704522.1 | Quorum-quenching protein AidA | VF |
| P1J23_RS28775 (P1J23_28775) | 18014..18712 | - | 699 | WP_169038414.1 | conjugal transfer pilus acetylase TraX | - |
| P1J23_RS28780 (P1J23_28780) | 18704..20122 | - | 1419 | Protein_31 | TraC family protein | - |
| P1J23_RS28785 (P1J23_28785) | 20124..20561 | - | 438 | Protein_32 | conjugal transfer protein TraB | - |
| P1J23_RS28790 (P1J23_28790) | 20561..21289 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| P1J23_RS28795 (P1J23_28795) | 21276..21842 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| P1J23_RS28800 (P1J23_28800) | 21864..22175 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| P1J23_RS28805 (P1J23_28805) | 22190..22555 | - | 366 | WP_169030100.1 | type IV conjugative transfer system pilin TraA | - |
| P1J23_RS28810 (P1J23_28810) | 22589..22816 | - | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| P1J23_RS28815 (P1J23_28815) | 22910..23596 | - | 687 | Protein_38 | PAS domain-containing protein | - |
| P1J23_RS28825 (P1J23_28825) | 25252..25679 | - | 428 | Protein_40 | IS110 family transposase | - |
| P1J23_RS28830 (P1J23_28830) | 25770..26998 | + | 1229 | WP_276171342.1 | IS3 family transposase IS2 | Transposase |
| P1J23_RS28835 (P1J23_28835) | 27160..27378 | + | 219 | WP_001353651.1 | Heat-stable enterotoxin ST-IA/ST-P | VF |
| P1J23_RS28840 (P1J23_28840) | 27537..28234 | + | 698 | WP_248698696.1 | IS1-like element IS1A family transposase | - |
| P1J23_RS28845 (P1J23_28845) | 28455..28982 | - | 528 | WP_000592915.1 | hypothetical protein | - |
| P1J23_RS28850 (P1J23_28850) | 28975..29499 | - | 525 | WP_000737845.1 | spore coat protein U domain-containing protein | - |
| P1J23_RS28855 (P1J23_28855) | 29499..30500 | - | 1002 | WP_276171341.1 | protein fanF | - |
| P1J23_RS28860 (P1J23_28860) | 30500..31186 | - | 687 | WP_001031857.1 | Chaperone protein FaeE | VF |
| P1J23_RS28865 (P1J23_28865) | 31179..33563 | - | 2385 | WP_276171340.1 | Outer membrane usher protein YraJ | VF |
| P1J23_RS28870 (P1J23_28870) | 33597..34139 | - | 543 | WP_169030132.1 | hypothetical protein | VF |
| P1J23_RS28875 (P1J23_28875) | 34282..34542 | - | 261 | WP_032215356.1 | hypothetical protein | VF |
| P1J23_RS28880 (P1J23_28880) | 34655..34936 | - | 282 | WP_001375145.1 | Major pilu subunit operon regulatory protein PapB | VF |
| P1J23_RS28885 (P1J23_28885) | 35391..36745 | - | 1355 | Protein_52 | IS66 family transposase ISSgsp1 | Transposase |
| P1J23_RS28890 (P1J23_28890) | 36951..37139 | - | 189 | Protein_53 | IS66 family transposase ISEc8 | Transposase |
| P1J23_RS28895 (P1J23_28895) | 37189..37536 | - | 348 | WP_042922210.1 | IS66 family transposase ISEc8 | Transposase |
| P1J23_RS28900 (P1J23_28900) | 37533..37934 | - | 402 | WP_276171357.1 | IS66 family transposase ISCfr14 | Transposase |
| P1J23_RS28905 (P1J23_28905) | 38010..38138 | + | 129 | Protein_56 | IS3 family transposase | - |
| P1J23_RS28910 (P1J23_28910) | 38459..38686 | - | 228 | Protein_57 | YaiO family outer membrane beta-barrel protein | - |
| P1J23_RS28915 (P1J23_28915) | 38760..39457 | + | 698 | WP_276171339.1 | IS1 family transposase IS1S | Transposase |
| P1J23_RS28920 (P1J23_28920) | 39595..39879 | + | 285 | WP_169030186.1 | hypothetical protein | - |
| P1J23_RS28925 (P1J23_28925) | 39966..40181 | - | 216 | WP_063854922.1 | hypothetical protein | - |
| P1J23_RS28930 (P1J23_28930) | 40504..41127 | - | 624 | Protein_61 | IS3 family transposase IS2 | Transposase |
| P1J23_RS28935 (P1J23_28935) | 41279..41641 | + | 363 | WP_236448463.1 | IS66 family transposase IS682 | Transposase |
| P1J23_RS28940 (P1J23_28940) | 41638..41988 | + | 351 | WP_000624720.1 | IS66 family transposase ISEc23 | Transposase |
| P1J23_RS28945 (P1J23_28945) | 42019..43632 | + | 1614 | WP_276171338.1 | IS66 family transposase ISEc23 | Transposase |
| P1J23_RS28950 (P1J23_28950) | 43664..43954 | - | 291 | Protein_65 | IS3 family transposase IS1203 | Transposase |
| P1J23_RS28955 (P1J23_28955) | 44145..45373 | + | 1229 | WP_276171337.1 | IS3 family transposase IS2 | Transposase |
| P1J23_RS28960 (P1J23_28960) | 45584..46402 | + | 819 | WP_096216232.1 | helix-turn-helix transcriptional regulator | - |
| P1J23_RS28965 (P1J23_28965) | 46455..47294 | - | 840 | WP_096216231.1 | HTH-type transcriptional activator RhaR | VF |
| P1J23_RS28970 (P1J23_28970) | 47723..48088 | - | 366 | WP_169030166.1 | PapG chaperone-binding domain-containing protein | - |
| P1J23_RS28975 (P1J23_28975) | 48141..48743 | - | 603 | Protein_70 | IS3 family transposase IS2 | Transposase |
| P1J23_RS28980 (P1J23_28980) | 48825..49190 | + | 366 | WP_000124096.1 | hypothetical protein | - |
| P1J23_RS28985 (P1J23_28985) | 49190..50377 | + | 1188 | WP_276171320.1 | IS91 family transposase IS91 | Transposase |
| P1J23_RS28990 (P1J23_28990) | 50561..51198 | - | 638 | Protein_73 | IS3 family transposase IS2 | Transposase |
| P1J23_RS28995 (P1J23_28995) | 51290..51613 | + | 324 | Protein_74 | IS3 family transposase IS2 | Transposase |
| P1J23_RS29000 (P1J23_29000) | 51719..51856 | - | 138 | WP_169030146.1 | hypothetical protein | - |
| P1J23_RS29005 (P1J23_29005) | 51998..52363 | + | 366 | WP_000124098.1 | hypothetical protein | - |
| P1J23_RS29010 (P1J23_29010) | 52363..53550 | + | 1188 | WP_000937614.1 | IS91 family transposase IS91 | Transposase |
| P1J23_RS29015 (P1J23_29015) | 53773..54045 | + | 273 | WP_011310366.1 | hypothetical protein | - |
| P1J23_RS29020 (P1J23_29020) | 54026..55234 | + | 1209 | WP_169030147.1 | IS91 family transposase ISSbo1 | Transposase |
| P1J23_RS29025 (P1J23_29025) | 55680..55931 | + | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| P1J23_RS29030 (P1J23_29030) | 55928..56215 | + | 288 | WP_169030134.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| P1J23_RS29035 (P1J23_29035) | 56217..56495 | + | 279 | Protein_82 | integrase core domain-containing protein | - |
| P1J23_RS29040 (P1J23_29040) | 56398..56736 | + | 339 | WP_236448435.1 | hypothetical protein | - |
| P1J23_RS29045 (P1J23_29045) | 57145..58122 | + | 978 | WP_000361618.1 | RepB family plasmid replication initiator protein | - |
| P1J23_RS29050 (P1J23_29050) | 58359..59095 | - | 737 | Protein_85 | tyrosine-type recombinase/integrase | - |
| P1J23_RS29055 (P1J23_29055) | 59269..59706 | - | 438 | WP_169030135.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| P1J23_RS29060 (P1J23_29060) | 59731..59913 | - | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| P1J23_RS29065 (P1J23_29065) | 60188..60700 | - | 513 | Protein_88 | IS3 family transposase IS2 | Transposase |
| P1J23_RS29070 (P1J23_29070) | 60745..61713 | + | 969 | WP_000654804.1 | IS5 family transposase IS903B | Transposase |
| P1J23_RS29075 (P1J23_29075) | 61858..63087 | + | 1230 | Protein_90 | IS3 family transposase IS2 | Transposase |
| P1J23_RS29080 (P1J23_29080) | 63349..63864 | + | 516 | WP_096216223.1 | RTX-I toxin-activating lysine-acyltransferase ApxIC | VF |
| P1J23_RS29085 (P1J23_29085) | 63873..66845 | + | 2973 | WP_219394493.1 | Hemolysin, chromosomal | VF |
| P1J23_RS29090 (P1J23_29090) | 66918..69041 | + | 2124 | WP_219394492.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| P1J23_RS29095 (P1J23_29095) | 69054..70490 | + | 1437 | WP_219394491.1 | Hemolysin secretion protein D, chromosomal | VF |
| P1J23_RS29100 (P1J23_29100) | 70885..71128 | + | 244 | Protein_95 | IS66 family transposase | - |
| P1J23_RS29105 (P1J23_29105) | 71238..71408 | + | 171 | WP_096216219.1 | FaeA/PapI family transcriptional regulator | - |
| P1J23_RS29110 (P1J23_29110) | 71508..72362 | + | 855 | WP_169038449.1 | polysaccharide deacetylase family protein | - |
| P1J23_RS29115 (P1J23_29115) | 72377..73528 | + | 1152 | WP_169038450.1 | D-inositol-3-phosphate glycosyltransferase | VF |
| P1J23_RS29120 (P1J23_29120) | 73549..73785 | + | 237 | WP_276171356.1 | hypothetical protein | - |
| P1J23_RS29125 (P1J23_29125) | 73966..75153 | - | 1188 | WP_000937614.1 | IS91 family transposase IS91 | Transposase |
| P1J23_RS29130 (P1J23_29130) | 75153..75518 | - | 366 | WP_000124098.1 | hypothetical protein | - |
| P1J23_RS29135 (P1J23_29135) | 75537..76367 | + | 831 | WP_276171343.1 | DUF535 family protein | - |
| P1J23_RS29140 (P1J23_29140) | 76604..77113 | + | 510 | Protein_103 | IS3 family transposase IS2 | Transposase |
| P1J23_RS29145 (P1J23_29145) | 77234..77371 | - | 138 | WP_169030146.1 | hypothetical protein | - |
| P1J23_RS29150 (P1J23_29150) | 77459..77731 | + | 273 | WP_011310366.1 | hypothetical protein | - |
| P1J23_RS29155 (P1J23_29155) | 77712..78062 | + | 351 | Protein_106 | IS91 family transposase ISSbo1 | Transposase |
| P1J23_RS29160 (P1J23_29160) | 78251..79438 | - | 1188 | WP_276171320.1 | IS91 family transposase IS91 | Transposase |
| P1J23_RS29165 (P1J23_29165) | 79438..79803 | - | 366 | WP_000124096.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|