MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 80658 bp
Accession: NZ_CP119739 Location: 1..80658 Organism: Escherichia coli strain E92 Replicon: plasmid pE92-5
Accession: NZ_CP119739 Location: 1..80658 Organism: Escherichia coli strain E92 Replicon: plasmid pE92-5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P1J22_RS28630 (P1J22_28630) | 658..1182 | + | 525 | WP_000737845.1 | spore coat protein U domain-containing protein | - |
| P1J22_RS28635 (P1J22_28635) | 1175..1702 | + | 528 | WP_000592915.1 | hypothetical protein | - |
| P1J22_RS28645 (P1J22_28645) | 2779..2997 | - | 219 | WP_001353651.1 | Heat-stable enterotoxin ST-IA/ST-P | VF |
| P1J22_RS28655 (P1J22_28655) | 4478..4905 | + | 428 | Protein_6 | IS110 family transposase | - |
| P1J22_RS28660 (P1J22_28660) | 5120..6348 | + | 1229 | WP_276171342.1 | IS3 family transposase IS2 | Transposase |
| P1J22_RS28665 (P1J22_28665) | 6561..7247 | + | 687 | Protein_8 | PAS domain-containing protein | - |
| P1J22_RS28670 (P1J22_28670) | 7341..7568 | + | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| P1J22_RS28675 (P1J22_28675) | 7602..7967 | + | 366 | WP_169030100.1 | type IV conjugative transfer system pilin TraA | - |
| P1J22_RS28680 (P1J22_28680) | 7982..8293 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| P1J22_RS28685 (P1J22_28685) | 8315..8881 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| P1J22_RS28690 (P1J22_28690) | 8868..9596 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| P1J22_RS28695 (P1J22_28695) | 9596..10033 | + | 438 | Protein_14 | conjugal transfer protein TraB | - |
| P1J22_RS28700 (P1J22_28700) | 10035..11453 | + | 1419 | Protein_15 | TraC family protein | - |
| P1J22_RS28705 (P1J22_28705) | 11445..12143 | + | 699 | WP_169038414.1 | conjugal transfer pilus acetylase TraX | - |
| P1J22_RS28710 (P1J22_28710) | 12202..13062 | + | 861 | WP_000704522.1 | Quorum-quenching protein AidA | VF |
| P1J22_RS28715 (P1J22_28715) | 13165..13725 | + | 561 | WP_001610319.1 | fertility inhibition protein FinO | - |
| P1J22_RS28720 (P1J22_28720) | 13857..14108 | + | 252 | WP_001372275.1 | hypothetical protein | - |
| P1J22_RS28725 (P1J22_28725) | 14310..14771 | + | 462 | WP_001233868.1 | thermonuclease family protein | - |
| P1J22_RS28730 (P1J22_28730) | 14817..15026 | + | 210 | WP_001610317.1 | hemolysin expression modulator Hha | - |
| P1J22_RS28735 (P1J22_28735) | 15064..15654 | + | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| P1J22_RS28740 (P1J22_28740) | 15894..16148 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| P1J22_RS28745 (P1J22_28745) | 16385..16459 | + | 75 | WP_001375168.1 | RepA leader peptide Tap | - |
| P1J22_RS28750 (P1J22_28750) | 16452..17309 | + | 858 | WP_024236927.1 | incFII family plasmid replication initiator RepA | - |
| P1J22_RS28755 (P1J22_28755) | 18010..18150 | + | 141 | WP_000829596.1 | hypothetical protein | - |
| P1J22_RS28760 (P1J22_28760) | 18223..18492 | + | 270 | WP_000079931.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| P1J22_RS28765 (P1J22_28765) | 18492..18770 | + | 279 | WP_244462184.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| P1J22_RS28770 (P1J22_28770) | 18842..19020 | + | 179 | Protein_29 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| P1J22_RS28775 (P1J22_28775) | 19091..19636 | + | 546 | WP_236448444.1 | hypothetical protein | - |
| P1J22_RS28780 (P1J22_28780) | 19908..20264 | - | 357 | WP_169030095.1 | hypothetical protein | - |
| P1J22_RS28785 (P1J22_28785) | 20436..20786 | - | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| P1J22_RS28790 (P1J22_28790) | 20789..21751 | - | 963 | WP_169030097.1 | plasmid segregation protein ParM | - |
| P1J22_RS28795 (P1J22_28795) | 21891..22193 | + | 303 | WP_169030101.1 | hypothetical protein | - |
| P1J22_RS28800 (P1J22_28800) | 22270..22953 | + | 684 | WP_169030096.1 | DNA methylase | - |
| P1J22_RS28805 (P1J22_28805) | 22954..23175 | + | 222 | WP_001104902.1 | hypothetical protein | - |
| P1J22_RS28810 (P1J22_28810) | 23069..23622 | + | 554 | Protein_37 | DUF1380 family protein | - |
| P1J22_RS28815 (P1J22_28815) | 23673..23870 | + | 198 | Protein_38 | hypothetical protein | - |
| P1J22_RS28820 (P1J22_28820) | 23900..25426 | - | 1527 | WP_276171345.1 | IS66 family transposase ISEc23 | Transposase |
| P1J22_RS28825 (P1J22_28825) | 25540..25812 | + | 273 | Protein_40 | IS3 family transposase IS1203 | Transposase |
| P1J22_RS28830 (P1J22_28830) | 25866..26543 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| P1J22_RS28835 (P1J22_28835) | 26543..26890 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| P1J22_RS28840 (P1J22_28840) | 26910..28481 | + | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| P1J22_RS28845 (P1J22_28845) | 28511..29460 | + | 950 | Protein_44 | IS3 family transposase IS629 | Transposase |
| P1J22_RS28850 (P1J22_28850) | 29534..29941 | - | 408 | Protein_45 | IS66 family transposase ISCro1 | Transposase |
| P1J22_RS28855 (P1J22_28855) | 30066..30923 | - | 858 | Protein_46 | IS91 family transposase ISSbo1 | Transposase |
| P1J22_RS28860 (P1J22_28860) | 31012..31377 | + | 366 | WP_000124096.1 | hypothetical protein | - |
| P1J22_RS28865 (P1J22_28865) | 31377..32564 | + | 1188 | WP_276171320.1 | IS91 family transposase IS91 | Transposase |
| P1J22_RS28870 (P1J22_28870) | 32753..33103 | - | 351 | Protein_49 | IS91 family transposase ISSbo1 | Transposase |
| P1J22_RS28875 (P1J22_28875) | 33084..33356 | - | 273 | WP_011310366.1 | hypothetical protein | - |
| P1J22_RS28880 (P1J22_28880) | 33372..33533 | + | 162 | Protein_51 | hypothetical protein | - |
| P1J22_RS28885 (P1J22_28885) | 33702..34211 | - | 510 | Protein_52 | IS3 family transposase IS2 | Transposase |
| P1J22_RS28890 (P1J22_28890) | 34448..35278 | - | 831 | WP_276171343.1 | DUF535 family protein | - |
| P1J22_RS28895 (P1J22_28895) | 35297..35662 | + | 366 | WP_000124098.1 | hypothetical protein | - |
| P1J22_RS28900 (P1J22_28900) | 35662..36849 | + | 1188 | WP_000937614.1 | IS91 family transposase IS91 | Transposase |
| P1J22_RS28905 (P1J22_28905) | 37030..37296 | - | 267 | WP_276171344.1 | hypothetical protein | - |
| P1J22_RS28910 (P1J22_28910) | 37287..38438 | - | 1152 | WP_169038450.1 | D-inositol-3-phosphate glycosyltransferase | VF |
| P1J22_RS28915 (P1J22_28915) | 38453..39307 | - | 855 | WP_169038449.1 | polysaccharide deacetylase family protein | - |
| P1J22_RS28920 (P1J22_28920) | 39407..39577 | - | 171 | WP_096216219.1 | FaeA/PapI family transcriptional regulator | - |
| P1J22_RS28925 (P1J22_28925) | 39687..39930 | - | 244 | Protein_60 | IS66 family transposase | - |
| P1J22_RS28930 (P1J22_28930) | 40325..41761 | - | 1437 | WP_219394491.1 | Hemolysin secretion protein D, chromosomal | VF |
| P1J22_RS28935 (P1J22_28935) | 41774..43897 | - | 2124 | WP_219394492.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| P1J22_RS28940 (P1J22_28940) | 43970..46942 | - | 2973 | WP_219394493.1 | Hemolysin, chromosomal | VF |
| P1J22_RS28945 (P1J22_28945) | 46951..47466 | - | 516 | WP_096216223.1 | RTX-I toxin-activating lysine-acyltransferase ApxIC | VF |
| P1J22_RS28950 (P1J22_28950) | 47728..48957 | - | 1230 | Protein_65 | IS3 family transposase IS2 | Transposase |
| P1J22_RS28955 (P1J22_28955) | 49102..50070 | - | 969 | WP_000654804.1 | IS5 family transposase IS903B | Transposase |
| P1J22_RS28960 (P1J22_28960) | 50115..50627 | + | 513 | Protein_67 | IS3 family transposase IS2 | Transposase |
| P1J22_RS28965 (P1J22_28965) | 50902..51084 | + | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| P1J22_RS28970 (P1J22_28970) | 51109..51546 | + | 438 | WP_169030135.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| P1J22_RS28975 (P1J22_28975) | 51720..52456 | + | 737 | Protein_70 | tyrosine-type recombinase/integrase | - |
| P1J22_RS28980 (P1J22_28980) | 52693..53670 | - | 978 | WP_000361618.1 | RepB family plasmid replication initiator protein | - |
| P1J22_RS28985 (P1J22_28985) | 54079..54417 | - | 339 | WP_236448435.1 | hypothetical protein | - |
| P1J22_RS28990 (P1J22_28990) | 54320..54598 | - | 279 | Protein_73 | integrase core domain-containing protein | - |
| P1J22_RS28995 (P1J22_28995) | 54600..54887 | - | 288 | WP_169030134.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| P1J22_RS29000 (P1J22_29000) | 54884..55135 | - | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| P1J22_RS29005 (P1J22_29005) | 55581..56789 | - | 1209 | WP_169030147.1 | IS91 family transposase ISSbo1 | Transposase |
| P1J22_RS29010 (P1J22_29010) | 56770..57042 | - | 273 | WP_011310366.1 | hypothetical protein | - |
| P1J22_RS29015 (P1J22_29015) | 57265..58452 | - | 1188 | WP_000937614.1 | IS91 family transposase IS91 | Transposase |
| P1J22_RS29020 (P1J22_29020) | 58452..58817 | - | 366 | WP_000124098.1 | hypothetical protein | - |
| P1J22_RS29025 (P1J22_29025) | 58959..59096 | + | 138 | WP_169030146.1 | hypothetical protein | - |
| P1J22_RS29030 (P1J22_29030) | 59202..59525 | - | 324 | Protein_81 | IS3 family transposase IS2 | Transposase |
| P1J22_RS29035 (P1J22_29035) | 59617..60254 | + | 638 | Protein_82 | IS3 family transposase IS2 | Transposase |
| P1J22_RS29040 (P1J22_29040) | 60438..61625 | - | 1188 | WP_276171320.1 | IS91 family transposase IS91 | Transposase |
| P1J22_RS29045 (P1J22_29045) | 61625..61990 | - | 366 | WP_000124096.1 | hypothetical protein | - |
| P1J22_RS29050 (P1J22_29050) | 62072..62674 | + | 603 | Protein_85 | IS3 family transposase IS2 | Transposase |
| P1J22_RS29055 (P1J22_29055) | 62727..63092 | + | 366 | WP_169030166.1 | PapG chaperone-binding domain-containing protein | - |
| P1J22_RS29060 (P1J22_29060) | 63521..64360 | + | 840 | WP_096216231.1 | HTH-type transcriptional activator RhaR | VF |
| P1J22_RS29065 (P1J22_29065) | 64413..65231 | - | 819 | WP_096216232.1 | helix-turn-helix transcriptional regulator | - |
| P1J22_RS29075 (P1J22_29075) | 66861..67151 | + | 291 | Protein_90 | IS3 family transposase IS1203 | Transposase |
| P1J22_RS29080 (P1J22_29080) | 67183..68796 | - | 1614 | WP_276171338.1 | IS66 family transposase ISEc23 | Transposase |
| P1J22_RS29085 (P1J22_29085) | 68827..69177 | - | 351 | WP_000624720.1 | IS66 family transposase ISEc23 | Transposase |
| P1J22_RS29090 (P1J22_29090) | 69174..69536 | - | 363 | WP_236448463.1 | IS66 family transposase IS682 | Transposase |
| P1J22_RS29095 (P1J22_29095) | 69688..70311 | + | 624 | Protein_94 | IS3 family transposase IS2 | Transposase |
| P1J22_RS29100 (P1J22_29100) | 70634..70849 | + | 216 | WP_063854922.1 | hypothetical protein | - |
| P1J22_RS29105 (P1J22_29105) | 70936..71220 | - | 285 | WP_169030186.1 | hypothetical protein | - |
| P1J22_RS29115 (P1J22_29115) | 72129..72356 | + | 228 | Protein_98 | YaiO family outer membrane beta-barrel protein | - |
| P1J22_RS29120 (P1J22_29120) | 72677..72805 | - | 129 | Protein_99 | IS3 family transposase | - |
| P1J22_RS29125 (P1J22_29125) | 72902..73282 | + | 381 | WP_169030141.1 | IS66 family transposase ISCfr14 | Transposase |
| P1J22_RS29130 (P1J22_29130) | 73279..73626 | + | 348 | WP_042922210.1 | IS66 family transposase ISEc8 | Transposase |
| P1J22_RS29135 (P1J22_29135) | 73676..73864 | + | 189 | Protein_102 | IS66 family transposase ISEc8 | Transposase |
| P1J22_RS29140 (P1J22_29140) | 74070..75424 | + | 1355 | Protein_103 | IS66 family transposase ISSgsp1 | Transposase |
| P1J22_RS29145 (P1J22_29145) | 75879..76160 | + | 282 | WP_001375145.1 | Major pilu subunit operon regulatory protein PapB | VF |
| P1J22_RS29150 (P1J22_29150) | 76258..76533 | + | 276 | WP_263852363.1 | hypothetical protein | VF |
| P1J22_RS29155 (P1J22_29155) | 76676..77218 | + | 543 | WP_169030132.1 | hypothetical protein | VF |
| P1J22_RS29160 (P1J22_29160) | 77252..79636 | + | 2385 | WP_276171340.1 | Outer membrane usher protein YraJ | VF |
| P1J22_RS29165 (P1J22_29165) | 79629..80315 | + | 687 | WP_001031857.1 | Chaperone protein FaeE | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|