MGE detailed information
MGE type: Mobilizable plasmid MGE length: 63996 bp
Accession: NZ_CP119582 Location: 1..63996 Organism: Escherichia coli strain C012_chr Replicon: plasmid pEC012-5
Accession: NZ_CP119582 Location: 1..63996 Organism: Escherichia coli strain C012_chr Replicon: plasmid pEC012-5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P1J04_RS26125 (P1J04_26125) | 1..1125 | + | 1125 | WP_000486716.1 | site-specific integrase | - |
| P1J04_RS26130 (P1J04_26130) | 1137..1790 | + | 654 | WP_170855322.1 | hypothetical protein | - |
| P1J04_RS26135 (P1J04_26135) | 1820..2352 | + | 533 | Protein_2 | thermonuclease family protein | - |
| P1J04_RS26140 (P1J04_26140) | 2447..2944 | + | 498 | WP_276131597.1 | hypothetical protein | - |
| P1J04_RS26150 (P1J04_26150) | 4383..5459 | + | 1077 | WP_233707891.1 | PcfJ domain-containing protein | - |
| P1J04_RS26155 (P1J04_26155) | 5629..6204 | + | 576 | WP_001303470.1 | hypothetical protein | - |
| P1J04_RS26160 (P1J04_26160) | 6209..8374 | + | 2166 | WP_063078686.1 | type IA DNA topoisomerase | - |
| P1J04_RS26165 (P1J04_26165) | 8443..8649 | + | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| P1J04_RS26170 (P1J04_26170) | 8995..9435 | + | 441 | WP_000666084.1 | hypothetical protein | - |
| P1J04_RS26175 (P1J04_26175) | 9416..10162 | - | 747 | WP_063101822.1 | PAP2 family protein | - |
| P1J04_RS26180 (P1J04_26180) | 10234..11859 | - | 1626 | WP_049589868.1 | phosphoethanolamine--lipid A transferase MCR-1.1 | VF |
| P1J04_RS26185 (P1J04_26185) | 12080..16393 | - | 4314 | WP_034169409.1 | hypothetical protein | - |
| P1J04_RS26190 (P1J04_26190) | 16390..16731 | - | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| P1J04_RS26195 (P1J04_26195) | 17099..17500 | + | 402 | WP_021575837.1 | hypothetical protein | - |
| P1J04_RS26200 (P1J04_26200) | 17518..18270 | + | 753 | WP_000797966.1 | conjugal transfer protein TraL | - |
| P1J04_RS26205 (P1J04_26205) | 18272..18979 | + | 708 | WP_021503228.1 | hypothetical protein | - |
| P1J04_RS26210 (P1J04_26210) | 18999..19325 | + | 327 | WP_063078684.1 | hypothetical protein | - |
| P1J04_RS26215 (P1J04_26215) | 19456..19893 | - | 438 | WP_000466318.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| P1J04_RS26220 (P1J04_26220) | 19918..20100 | - | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| P1J04_RS26225 (P1J04_26225) | 20397..20840 | + | 444 | WP_000068545.1 | hypothetical protein | - |
| P1J04_RS26230 (P1J04_26230) | 21252..21545 | - | 294 | WP_000673428.1 | hypothetical protein | - |
| P1J04_RS26235 (P1J04_26235) | 21661..21894 | - | 234 | WP_241225376.1 | hypothetical protein | - |
| P1J04_RS26240 (P1J04_26240) | 22115..22357 | - | 243 | WP_000151456.1 | hypothetical protein | Antitoxin Detail |
| P1J04_RS26245 (P1J04_26245) | 22354..22608 | - | 255 | WP_001230709.1 | hypothetical protein | Toxin Detail |
| P1J04_RS26250 (P1J04_26250) | 22605..23147 | - | 543 | WP_001083904.1 | hypothetical protein | - |
| P1J04_RS26255 (P1J04_26255) | 23251..23766 | - | 516 | WP_001025393.1 | J domain-containing protein | - |
| P1J04_RS26260 (P1J04_26260) | 24167..24496 | - | 330 | WP_001542022.1 | hypothetical protein | - |
| P1J04_RS26265 (P1J04_26265) | 25085..25750 | + | 666 | WP_000532148.1 | division plane positioning ATPase MipZ | - |
| P1J04_RS26270 (P1J04_26270) | 25824..26108 | + | 285 | WP_001162371.1 | hypothetical protein | - |
| P1J04_RS26275 (P1J04_26275) | 26126..26722 | - | 597 | WP_000125165.1 | ProQ/FINO family protein | - |
| P1J04_RS26280 (P1J04_26280) | 26872..26994 | - | 123 | WP_223170659.1 | type I toxin-antitoxin system Hok family toxin | - |
| P1J04_RS26285 (P1J04_26285) | 26939..27091 | - | 153 | Protein_32 | DUF5431 family protein | - |
| P1J04_RS26290 (P1J04_26290) | 27755..28981 | - | 1227 | WP_001672025.1 | IS200-IS605 family transposase ISSen6 | Transposase |
| P1J04_RS26295 (P1J04_26295) | 29040..29444 | + | 405 | WP_001175008.1 | IS200-IS605 family transposase ISSen6 | Transposase |
| P1J04_RS26300 (P1J04_26300) | 29559..29749 | - | 191 | Protein_35 | hypothetical protein | - |
| P1J04_RS26305 (P1J04_26305) | 30450..31478 | - | 1029 | WP_001175212.1 | plasmid replication initiator RepA | - |
| P1J04_RS26310 (P1J04_26310) | 32610..33062 | + | 453 | WP_127148752.1 | CaiF/GrlA family transcriptional regulator | - |
| P1J04_RS26315 (P1J04_26315) | 33055..33270 | + | 216 | WP_001127357.1 | DUF1187 family protein | - |
| P1J04_RS26320 (P1J04_26320) | 33263..33439 | + | 177 | WP_000753050.1 | hypothetical protein | - |
| P1J04_RS26325 (P1J04_26325) | 33466..34419 | + | 954 | WP_072109880.1 | SPFH domain-containing protein | - |
| P1J04_RS26330 (P1J04_26330) | 34793..35236 | + | 444 | WP_072037179.1 | NfeD family protein | - |
| P1J04_RS26335 (P1J04_26335) | 35240..35410 | + | 171 | WP_000550720.1 | hypothetical protein | - |
| P1J04_RS26340 (P1J04_26340) | 35421..35633 | + | 213 | WP_039022940.1 | hypothetical protein | - |
| P1J04_RS26345 (P1J04_26345) | 35904..36206 | + | 303 | WP_001360345.1 | hypothetical protein | - |
| P1J04_RS26350 (P1J04_26350) | 36203..36460 | + | 258 | WP_000739144.1 | hypothetical protein | - |
| P1J04_RS26355 (P1J04_26355) | 36464..37459 | + | 996 | WP_001028541.1 | hypothetical protein | VF |
| P1J04_RS26360 (P1J04_26360) | 37465..38109 | + | 645 | WP_001310442.1 | hypothetical protein | VF |
| P1J04_RS26365 (P1J04_26365) | 38118..38342 | + | 225 | WP_000713561.1 | EexN family lipoprotein | - |
| P1J04_RS26370 (P1J04_26370) | 38597..39388 | - | 792 | WP_022645137.1 | DUF5710 domain-containing protein | - |
| P1J04_RS26375 (P1J04_26375) | 39436..40071 | + | 636 | WP_022645136.1 | hypothetical protein | - |
| P1J04_RS26380 (P1J04_26380) | 40171..40422 | + | 252 | WP_000121741.1 | hypothetical protein | Antitoxin Detail |
| P1J04_RS26385 (P1J04_26385) | 40412..40693 | + | 282 | WP_000638823.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| P1J04_RS26390 (P1J04_26390) | 40761..41060 | + | 300 | WP_000835764.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| P1J04_RS26395 (P1J04_26395) | 41063..42298 | + | 1236 | WP_015059538.1 | hypothetical protein | VF |
| P1J04_RS26400 (P1J04_26400) | 42304..42741 | + | 438 | WP_000539665.1 | type IV pilus biogenesis protein PilM | - |
| P1J04_RS26405 (P1J04_26405) | 42860..43258 | + | 399 | WP_001153669.1 | hypothetical protein | - |
| P1J04_RS26410 (P1J04_26410) | 43279..43863 | + | 585 | WP_001177114.1 | Type IV secretion system protein virB1 | VF |
| P1J04_RS26415 (P1J04_26415) | 43863..44153 | + | 291 | WP_000865479.1 | conjugal transfer protein | - |
| P1J04_RS26420 (P1J04_26420) | 44224..44544 | + | 321 | WP_000362080.1 | VirB3 family type IV secretion system protein | - |
| P1J04_RS26425 (P1J04_26425) | 44550..46907 | + | 2358 | WP_065304451.1 | VirB4 family type IV secretion system protein | - |
| P1J04_RS26430 (P1J04_26430) | 47073..47807 | + | 735 | WP_000432282.1 | Type IV secretion system protein virB8 | VF |
| P1J04_RS26435 (P1J04_26435) | 47804..48574 | + | 771 | WP_001542009.1 | hypothetical protein | VF |
| P1J04_RS26440 (P1J04_26440) | 48564..49703 | + | 1140 | WP_001542008.1 | hypothetical protein | VF |
| P1J04_RS26445 (P1J04_26445) | 49722..50777 | + | 1056 | WP_001542006.1 | Type IV secretion system protein VirB11 | VF |
| P1J04_RS26450 (P1J04_26450) | 50793..52751 | + | 1959 | WP_039022943.1 | type IV secretory system conjugative DNA transfer family protein | - |
| P1J04_RS26455 (P1J04_26455) | 52798..53322 | + | 525 | WP_001401691.1 | sigma 54-interacting transcriptional regulator | - |
| P1J04_RS26460 (P1J04_26460) | 53315..54958 | + | 1644 | WP_001035590.1 | Type 3 secretion system secretin | VF |
| P1J04_RS26465 (P1J04_26465) | 55009..56319 | + | 1311 | WP_001454111.1 | type 4b pilus protein PilO2 | - |
| P1J04_RS26470 (P1J04_26470) | 56303..56797 | + | 495 | WP_000912553.1 | hypothetical protein | VF |
| P1J04_RS26475 (P1J04_26475) | 56822..58360 | + | 1539 | WP_000466225.1 | hypothetical protein | VF |
| P1J04_RS26480 (P1J04_26480) | 58351..59460 | + | 1110 | WP_000974903.1 | hypothetical protein | VF |
| P1J04_RS26485 (P1J04_26485) | 59505..60062 | + | 558 | WP_000095048.1 | type 4 pilus major pilin | - |
| P1J04_RS26490 (P1J04_26490) | 60128..60610 | + | 483 | WP_001258095.1 | hypothetical protein | VF |
| P1J04_RS26495 (P1J04_26495) | 60614..61249 | + | 636 | WP_000934977.1 | hypothetical protein | VF |
| P1J04_RS26500 (P1J04_26500) | 61262..62578 | + | 1317 | WP_021500066.1 | hypothetical protein | VF |
| P1J04_RS26505 (P1J04_26505) | 62557..62886 | - | 330 | WP_001141248.1 | hypothetical protein | - |
| P1J04_RS26510 (P1J04_26510) | 63519..63674 | + | 156 | WP_001358489.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|