MGE detailed information
MGE type: Genomic_island MGE length: 11480 bp
Accession: NZ_CP119137 Location: 1006995..1018474 Organism: Salmonella enterica subsp. enterica serovar Goldcoast isolate Sal02792 Replicon: chromosome
Accession: NZ_CP119137 Location: 1006995..1018474 Organism: Salmonella enterica subsp. enterica serovar Goldcoast isolate Sal02792 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P0D85_RS06055 (1003140) | 1003140..1003520 | + | 381 | WP_126523876.1 | DUF4440 domain-containing protein | - |
| P0D85_RS06060 (1003576) | 1003576..1006143 | - | 2568 | WP_001005802.1 | DNA mismatch repair protein MutS | - |
| P0D85_RS06065 (1006302) | 1006302..1006823 | + | 522 | WP_061383865.1 | hypothetical protein | - |
| P0D85_RS06070 (1006995) | 1006995..1007651 | - | 657 | WP_058821376.1 | protein-serine/threonine phosphatase | - |
| P0D85_RS06075 (1007986) | 1007986..1008203 | + | 218 | Protein_945 | IS5 family transposase ISEcl3 | Transposase |
| P0D85_RS06080 (1008276) | 1008276..1008803 | - | 528 | WP_126523877.1 | GNAT family N-acetyltransferase | Toxin Detail |
| P0D85_RS06085 (1008800) | 1008800..1009090 | - | 291 | WP_000855694.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| P0D85_RS06090 (1009360) | 1009360..1009545 | - | 186 | Protein_948 | IS3 family transposase | - |
| P0D85_RS06095 (1009800) | 1009800..1010126 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| P0D85_RS06100 (1010399) | 1010399..1010746 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| P0D85_RS06105 (1010731) | 1010731..1011180 | - | 450 | WP_023261375.1 | hypothetical protein | - |
| P0D85_RS06110 (1011611) | 1011611..1012054 | - | 444 | WP_126523878.1 | Type 3 secretion system pilotin | VF |
| P0D85_RS06115 (1012511) | 1012511..1013161 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| P0D85_RS06120 (1013158) | 1013158..1014846 | + | 1689 | WP_000848102.1 | Type 3 secretion system secretin | VF |
| P0D85_RS06125 (1014843) | 1014843..1015961 | + | 1119 | WP_000612166.1 | Protein MxiC | VF |
| P0D85_RS06130 (1015986) | 1015986..1018043 | + | 2058 | WP_126523879.1 | Invasion protein InvA | VF |
| P0D85_RS06135 (1018067) | 1018067..1018474 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| P0D85_RS06140 (1018471) | 1018471..1019766 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| P0D85_RS06145 (1019744) | 1019744..1020187 | + | 444 | WP_000555884.1 | SPI-1 type III secretion system protein SpaM | - |
| P0D85_RS06150 (1020187) | 1020187..1021197 | + | 1011 | WP_023137851.1 | SPI-1 type III secretion system protein SpaN | - |
| P0D85_RS06155 (1021197) | 1021197..1022108 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| P0D85_RS06160 (1022098) | 1022098..1022772 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| P0D85_RS06165 (1022798) | 1022798..1023058 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0.01 |