MGE detailed information
MGE type: Prophage MGE length: 63499 bp
Accession: NZ_CP119113 Location: 926809..990307 Organism: Staphylococcus aureus strain GENOMIC22-002 Replicon: chromosome
Accession: NZ_CP119113 Location: 926809..990307 Organism: Staphylococcus aureus strain GENOMIC22-002 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PXV46_RS04540 (PXV46_04540) | 922303..922536 | + | 234 | WP_000556760.1 | preprotein translocase subunit SecG | - |
| PXV46_RS04545 (PXV46_04545) | 922665..923405 | + | 741 | WP_001165970.1 | carboxylesterase | - |
| PXV46_RS04550 (PXV46_04550) | 923439..925811 | + | 2373 | WP_001050055.1 | ribonuclease R | - |
| PXV46_RS04555 (PXV46_04555) | 925833..926297 | + | 465 | WP_001085185.1 | SsrA-binding protein SmpB | - |
| PXV46_RS04565 (PXV46_04565) | 926809..927858 | - | 1050 | WP_021285879.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PXV46_RS04570 (PXV46_04570) | 927920..928435 | - | 516 | WP_021285878.1 | hypothetical protein | - |
| PXV46_RS04575 (PXV46_04575) | 928439..928930 | - | 492 | WP_001573838.1 | hypothetical protein | - |
| PXV46_RS04580 (PXV46_04580) | 928951..929409 | - | 459 | WP_000521395.1 | hypothetical protein | - |
| PXV46_RS04585 (PXV46_04585) | 929431..929757 | - | 327 | WP_000455972.1 | helix-turn-helix transcriptional regulator | - |
| PXV46_RS04590 (PXV46_04590) | 929920..930129 | + | 210 | WP_001114715.1 | helix-turn-helix transcriptional regulator | - |
| PXV46_RS04595 (PXV46_04595) | 930168..930893 | + | 726 | WP_015978381.1 | phage repressor protein | - |
| PXV46_RS04600 (PXV46_04600) | 930918..931127 | + | 210 | WP_000455728.1 | hypothetical protein | - |
| PXV46_RS04605 (PXV46_04605) | 931140..931301 | + | 162 | WP_000066011.1 | DUF1270 domain-containing protein | - |
| PXV46_RS04610 (PXV46_04610) | 931393..931653 | + | 261 | WP_000291075.1 | hypothetical protein ; Integrase | Integrase |
| PXV46_RS04615 (PXV46_04615) | 931661..931897 | + | 237 | WP_000802315.1 | hypothetical protein | - |
| PXV46_RS04620 (PXV46_04620) | 931890..932369 | + | 480 | WP_000002513.1 | siphovirus Gp157 family protein | - |
| PXV46_RS04625 (PXV46_04625) | 932369..933007 | + | 639 | WP_021285877.1 | ERF family protein | - |
| PXV46_RS04630 (PXV46_04630) | 933007..933435 | + | 429 | WP_000934783.1 | single-stranded DNA-binding protein | - |
| PXV46_RS04635 (PXV46_04635) | 933449..934123 | + | 675 | WP_021285876.1 | putative HNHc nuclease | - |
| PXV46_RS04640 (PXV46_04640) | 934116..934871 | + | 756 | WP_001037657.1 | DnaD domain protein | - |
| PXV46_RS04645 (PXV46_04645) | 934871..935227 | + | 357 | WP_001132243.1 | hypothetical protein | - |
| PXV46_RS04650 (PXV46_04650) | 935224..936465 | + | 1242 | WP_001106166.1 | DnaB helicase C-terminal domain-containing protein | - |
| PXV46_RS04655 (PXV46_04655) | 936462..936677 | + | 216 | WP_021285875.1 | hypothetical protein | - |
| PXV46_RS04660 (PXV46_04660) | 936680..936901 | + | 222 | WP_001123688.1 | DUF3269 family protein | - |
| PXV46_RS04665 (PXV46_04665) | 936911..937318 | + | 408 | WP_021285874.1 | RusA family crossover junction endodeoxyribonuclease | - |
| PXV46_RS04670 (PXV46_04670) | 937318..937503 | + | 186 | WP_021285873.1 | DUF3113 family protein | - |
| PXV46_RS04675 (PXV46_04675) | 937504..938121 | + | 618 | WP_021285872.1 | SA1788 family PVL leukocidin-associated protein | - |
| PXV46_RS04680 (PXV46_04680) | 938121..938375 | + | 255 | WP_021285871.1 | DUF3310 domain-containing protein | - |
| PXV46_RS04685 (PXV46_04685) | 938375..938623 | + | 249 | WP_078069534.1 | SAV1978 family virulence-associated passenger protein | - |
| PXV46_RS04690 (PXV46_04690) | 938638..938844 | + | 207 | WP_021285869.1 | hypothetical protein | - |
| PXV46_RS04695 (PXV46_04695) | 938847..939254 | + | 408 | WP_000695770.1 | hypothetical protein | - |
| PXV46_RS04700 (PXV46_04700) | 939251..939598 | + | 348 | WP_000979209.1 | YopX family protein | - |
| PXV46_RS04705 (PXV46_04705) | 939595..939903 | + | 309 | WP_000144708.1 | hypothetical protein | - |
| PXV46_RS04710 (PXV46_04710) | 939896..940147 | + | 252 | WP_031267622.1 | DUF1024 family protein | Toxin Detail |
| PXV46_RS04715 (PXV46_04715) | 940137..940310 | + | 174 | WP_000028424.1 | hypothetical protein | Antitoxin Detail |
| PXV46_RS04720 (PXV46_04720) | 940311..940472 | + | 162 | WP_000889684.1 | hypothetical protein | - |
| PXV46_RS04725 (PXV46_04725) | 940487..940993 | + | 507 | WP_001061842.1 | dUTPase | - |
| PXV46_RS04730 (PXV46_04730) | 941030..941236 | + | 207 | WP_021285914.1 | DUF1381 domain-containing protein | - |
| PXV46_RS04735 (PXV46_04735) | 941233..941436 | + | 204 | WP_000141180.1 | hypothetical protein | - |
| PXV46_RS04740 (PXV46_04740) | 941429..941665 | + | 237 | WP_000608281.1 | hypothetical protein | - |
| PXV46_RS04745 (PXV46_04745) | 941655..942044 | + | 390 | WP_169538641.1 | hypothetical protein | - |
| PXV46_RS04750 (PXV46_04750) | 942041..942214 | + | 174 | WP_000595258.1 | transcriptional activator RinB | - |
| PXV46_RS04755 (PXV46_04755) | 942215..942616 | + | 402 | WP_000286968.1 | hypothetical protein | - |
| PXV46_RS04760 (PXV46_04760) | 942964..943344 | + | 381 | WP_031838201.1 | DNA-binding protein | - |
| PXV46_RS04765 (PXV46_04765) | 943328..944582 | + | 1255 | Protein_928 | PBSX family phage terminase large subunit | - |
| PXV46_RS04770 (PXV46_04770) | 944601..946007 | + | 1407 | WP_031886702.1 | phage portal protein | - |
| PXV46_RS04775 (PXV46_04775) | 945946..946926 | + | 981 | WP_049949321.1 | phage head morphogenesis protein | - |
| PXV46_RS04780 (PXV46_04780) | 947024..947620 | + | 597 | WP_015967248.1 | phage scaffolding protein | - |
| PXV46_RS04785 (PXV46_04785) | 947641..948465 | + | 825 | WP_031838205.1 | N4-gp56 family major capsid protein | - |
| PXV46_RS04790 (PXV46_04790) | 948482..948808 | + | 327 | WP_031838206.1 | Rho termination factor N-terminal domain-containing protein | - |
| PXV46_RS04795 (PXV46_04795) | 948808..949122 | + | 315 | WP_031838207.1 | phage head-tail connector protein | - |
| PXV46_RS04800 (PXV46_04800) | 949115..949450 | + | 336 | WP_031838208.1 | phage head closure protein | - |
| PXV46_RS04805 (PXV46_04805) | 949437..949850 | + | 414 | WP_031838209.1 | HK97 gp10 family phage protein | - |
| PXV46_RS04810 (PXV46_04810) | 949863..950300 | + | 438 | WP_031838210.1 | DUF3168 domain-containing protein | - |
| PXV46_RS04815 (PXV46_04815) | 950287..950847 | + | 561 | WP_000046067.1 | hypothetical protein | - |
| PXV46_RS04820 (PXV46_04820) | 950909..951403 | + | 495 | WP_000141084.1 | tail assembly chaperone | - |
| PXV46_RS04825 (PXV46_04825) | 951424..951765 | + | 342 | WP_049949322.1 | hypothetical protein | - |
| PXV46_RS04830 (PXV46_04830) | 951768..954737 | + | 2970 | WP_031838212.1 | terminase | - |
| PXV46_RS04835 (PXV46_04835) | 954752..955687 | + | 936 | WP_031838213.1 | phage tail family protein | - |
| PXV46_RS04840 (PXV46_04840) | 955698..957584 | + | 1887 | WP_031903449.1 | SGNH/GDSL hydrolase family protein | - |
| PXV46_RS04845 (PXV46_04845) | 957597..959495 | + | 1899 | WP_031838215.1 | hypothetical protein | - |
| PXV46_RS04850 (PXV46_04850) | 959495..961318 | + | 1824 | WP_031838216.1 | BppU family phage baseplate upper protein | - |
| PXV46_RS04855 (PXV46_04855) | 961318..961695 | + | 378 | WP_031838217.1 | DUF2977 domain-containing protein | - |
| PXV46_RS04860 (PXV46_04860) | 961699..961872 | + | 174 | WP_078098837.1 | XkdX family protein | - |
| PXV46_RS04865 (PXV46_04865) | 961911..962345 | + | 435 | WP_031903468.1 | hypothetical protein | - |
| PXV46_RS04870 (PXV46_04870) | 962329..962724 | + | 396 | WP_031838220.1 | hypothetical protein | - |
| PXV46_RS04875 (PXV46_04875) | 962777..964651 | + | 1875 | WP_031886698.1 | glucosaminidase domain-containing protein | - |
| PXV46_RS04880 (PXV46_04880) | 964664..965242 | + | 579 | Protein_951 | phage baseplate upper protein | - |
| PXV46_RS04885 (PXV46_04885) | 966539..967258 | + | 720 | WP_223877258.1 | SGNH/GDSL hydrolase family protein | - |
| PXV46_RS04890 (PXV46_04890) | 967314..967751 | + | 438 | WP_021285832.1 | phage holin | - |
| PXV46_RS04895 (PXV46_04895) | 967732..969177 | + | 1446 | WP_021285831.1 | SH3 domain-containing protein | - |
| PXV46_RS04900 (PXV46_04900) | 969782..969976 | + | 195 | WP_021285829.1 | hypothetical protein | - |
| PXV46_RS04905 (PXV46_04905) | 969991..970191 | + | 201 | WP_021285828.1 | hypothetical protein | - |
| PXV46_RS04910 (PXV46_04910) | 970728..971273 | + | 546 | WP_000280154.1 | hypothetical protein | - |
| PXV46_RS04915 (PXV46_04915) | 971704..972432 | - | 729 | WP_000757407.1 | DUF5067 domain-containing protein | - |
| PXV46_RS04920 (PXV46_04920) | 972878..973033 | + | 156 | WP_014937001.1 | hypothetical protein | - |
| PXV46_RS04925 (PXV46_04925) | 973041..973562 | + | 522 | WP_000608190.1 | hypothetical protein | - |
| PXV46_RS04930 (PXV46_04930) | 973701..974231 | + | 531 | WP_001167164.1 | N-acetyltransferase | - |
| PXV46_RS04935 (PXV46_04935) | 974495..977290 | + | 2796 | WP_114161249.1 | hypothetical protein | VF |
| PXV46_RS04940 (PXV46_04940) | 977511..979025 | + | 1515 | WP_021286062.1 | hypothetical protein | VF |
| PXV46_RS04945 (PXV46_04945) | 979376..980302 | + | 927 | WP_000728063.1 | extracellular matrix protein-binding adhesin Emp | - |
| PXV46_RS04950 (PXV46_04950) | 980636..981118 | + | 483 | WP_000824489.1 | hypothetical protein | VF |
| PXV46_RS04955 (PXV46_04955) | 981459..982145 | + | 687 | WP_001574556.1 | thermonuclease family protein | - |
| PXV46_RS04960 (PXV46_04960) | 982502..982702 | + | 201 | WP_001059082.1 | cold-shock protein | - |
| PXV46_RS04965 (PXV46_04965) | 983199..983417 | - | 219 | WP_000005881.1 | hypothetical protein | - |
| PXV46_RS04970 (PXV46_04970) | 983478..983762 | - | 285 | WP_001004403.1 | hypothetical protein | - |
| PXV46_RS04975 (PXV46_04975) | 983850..984419 | - | 570 | WP_001106655.1 | lipoprotein N-acylation protein LnsA | - |
| PXV46_RS04980 (PXV46_04980) | 984607..984795 | - | 189 | WP_000052076.1 | hypothetical protein | Toxin Detail |
| PXV46_RS04985 (PXV46_04985) | 984823..985083 | - | 261 | WP_001059690.1 | hypothetical protein | Antitoxin Detail |
| PXV46_RS04990 (PXV46_04990) | 985425..985628 | + | 204 | WP_000145163.1 | sterile alpha motif-like domain-containing protein | - |
| PXV46_RS04995 (PXV46_04995) | 985625..985861 | - | 237 | WP_000368687.1 | hypothetical protein | - |
| PXV46_RS05000 (PXV46_05000) | 986086..986667 | + | 582 | WP_001140696.1 | histidine phosphatase family protein | - |
| PXV46_RS05005 (PXV46_05005) | 986740..987357 | - | 618 | WP_000255562.1 | LysE/ArgO family amino acid transporter | - |
| PXV46_RS05010 (PXV46_05010) | 987506..988000 | - | 495 | WP_000569881.1 | GNAT family N-acetyltransferase | - |
| PXV46_RS05015 (PXV46_05015) | 988399..988821 | - | 423 | WP_000974452.1 | organic hydroperoxide resistance protein | - |
| PXV46_RS05020 (PXV46_05020) | 988969..989685 | + | 717 | WP_000150026.1 | type I 3-dehydroquinate dehydratase | - |
| PXV46_RS05025 (PXV46_05025) | 989768..990307 | + | 540 | WP_000422911.1 | nitroreductase | - |
| PXV46_RS05030 (PXV46_05030) | 990457..990777 | - | 321 | WP_001147955.1 | thioredoxin family protein | - |
| PXV46_RS05035 (PXV46_05035) | 990921..991277 | + | 357 | WP_000589549.1 | arsenate reductase family protein | - |
| PXV46_RS05040 (PXV46_05040) | 991435..991815 | + | 381 | WP_000290492.1 | glycine cleavage system protein GcvH | - |
| PXV46_RS05045 (PXV46_05045) | 991995..992873 | + | 879 | WP_021285965.1 | YwqG family protein | - |
| PXV46_RS05050 (PXV46_05050) | 993575..993961 | + | 387 | WP_001018957.1 | toprim domain-containing protein | - |
| PXV46_RS05055 (PXV46_05055) | 993954..994250 | + | 297 | WP_001065802.1 | thioredoxin family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|