MGE detailed information
MGE type: Prophage MGE length: 45915 bp
Accession: NZ_CP119113 Location: 380503..426417 Organism: Staphylococcus aureus strain GENOMIC22-002 Replicon: chromosome
Accession: NZ_CP119113 Location: 380503..426417 Organism: Staphylococcus aureus strain GENOMIC22-002 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PXV46_RS01690 (PXV46_01690) | 375947..376615 | + | 669 | WP_000936721.1 | N-acetylmannosamine-6-phosphate 2-epimerase | - |
| PXV46_RS01695 (PXV46_01695) | 376745..378058 | - | 1314 | WP_001077706.1 | YjiH family protein | - |
| PXV46_RS01700 (PXV46_01700) | 378475..380409 | + | 1935 | Protein_337 | YSIRK domain-containing triacylglycerol lipase Lip2/Geh | - |
| PXV46_RS01705 (PXV46_01705) | 380503..381708 | - | 1206 | WP_031795352.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PXV46_RS01710 (PXV46_01710) | 381834..382448 | + | 615 | WP_000191466.1 | hypothetical protein | - |
| PXV46_RS01715 (PXV46_01715) | 382445..382591 | - | 147 | WP_001013104.1 | hypothetical protein | - |
| PXV46_RS01720 (PXV46_01720) | 382627..382809 | - | 183 | WP_000705240.1 | hypothetical protein | - |
| PXV46_RS01725 (PXV46_01725) | 382905..383825 | - | 921 | WP_031903415.1 | exonuclease domain-containing protein | - |
| PXV46_RS01730 (PXV46_01730) | 383841..384455 | - | 615 | WP_000801423.1 | XRE family transcriptional regulator | - |
| PXV46_RS01735 (PXV46_01735) | 384627..384854 | + | 228 | WP_031903416.1 | hypothetical protein | - |
| PXV46_RS01740 (PXV46_01740) | 384880..385656 | + | 777 | WP_001148559.1 | phage antirepressor | - |
| PXV46_RS01745 (PXV46_01745) | 385672..385890 | + | 219 | WP_001001383.1 | hypothetical protein | - |
| PXV46_RS01750 (PXV46_01750) | 385940..386083 | + | 144 | WP_000939498.1 | hypothetical protein | - |
| PXV46_RS01755 (PXV46_01755) | 386073..386282 | - | 210 | WP_000642492.1 | hypothetical protein | - |
| PXV46_RS01760 (PXV46_01760) | 386338..386583 | + | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| PXV46_RS01765 (PXV46_01765) | 386552..386917 | - | 366 | WP_016170627.1 | hypothetical protein | Antitoxin Detail |
| PXV46_RS01770 (PXV46_01770) | 386973..387686 | + | 714 | WP_058332268.1 | BRO family protein | - |
| PXV46_RS01775 (PXV46_01775) | 387699..387908 | + | 210 | WP_000455728.1 | hypothetical protein | - |
| PXV46_RS01780 (PXV46_01780) | 387922..388092 | + | 171 | WP_031838382.1 | DUF1270 domain-containing protein | - |
| PXV46_RS01785 (PXV46_01785) | 388097..388411 | + | 315 | WP_031838381.1 | hypothetical protein | - |
| PXV46_RS01790 (PXV46_01790) | 388476..388778 | + | 303 | WP_031838380.1 | DUF2482 family protein | - |
| PXV46_RS01795 (PXV46_01795) | 388783..389043 | + | 261 | WP_000291481.1 | DUF1108 family protein | - |
| PXV46_RS01800 (PXV46_01800) | 389056..389592 | + | 537 | WP_000999048.1 | host-nuclease inhibitor Gam family protein | - |
| PXV46_RS01805 (PXV46_01805) | 389593..390372 | + | 780 | WP_000137071.1 | ATP-binding protein | - |
| PXV46_RS01810 (PXV46_01810) | 390402..390956 | + | 555 | WP_000704713.1 | single-stranded DNA-binding protein | - |
| PXV46_RS01815 (PXV46_01815) | 390969..391640 | + | 672 | WP_031838379.1 | putative HNHc nuclease | - |
| PXV46_RS01820 (PXV46_01820) | 391633..392388 | + | 756 | WP_031794789.1 | DnaD domain protein | - |
| PXV46_RS01825 (PXV46_01825) | 392388..392744 | + | 357 | WP_031794788.1 | hypothetical protein | - |
| PXV46_RS01830 (PXV46_01830) | 392741..393982 | + | 1242 | WP_221917899.1 | DnaB helicase C-terminal domain-containing protein | - |
| PXV46_RS01835 (PXV46_01835) | 393979..394194 | + | 216 | WP_021285875.1 | hypothetical protein | - |
| PXV46_RS01840 (PXV46_01840) | 394197..394418 | + | 222 | WP_001123688.1 | DUF3269 family protein | - |
| PXV46_RS01845 (PXV46_01845) | 394428..394835 | + | 408 | WP_021285874.1 | RusA family crossover junction endodeoxyribonuclease | - |
| PXV46_RS01850 (PXV46_01850) | 394835..395020 | + | 186 | WP_021285873.1 | DUF3113 family protein | - |
| PXV46_RS01855 (PXV46_01855) | 395021..395638 | + | 618 | WP_021285872.1 | SA1788 family PVL leukocidin-associated protein | - |
| PXV46_RS01860 (PXV46_01860) | 395638..395892 | + | 255 | WP_021285871.1 | DUF3310 domain-containing protein | - |
| PXV46_RS01865 (PXV46_01865) | 395892..396140 | + | 249 | WP_078069534.1 | SAV1978 family virulence-associated passenger protein | - |
| PXV46_RS01870 (PXV46_01870) | 396155..396361 | + | 207 | WP_021285869.1 | hypothetical protein | - |
| PXV46_RS01875 (PXV46_01875) | 396364..396771 | + | 408 | WP_031903455.1 | hypothetical protein | - |
| PXV46_RS01880 (PXV46_01880) | 396768..397115 | + | 348 | WP_000979209.1 | YopX family protein | - |
| PXV46_RS01885 (PXV46_01885) | 397112..397419 | + | 308 | Protein_374 | hypothetical protein | - |
| PXV46_RS01890 (PXV46_01890) | 397412..397663 | + | 252 | WP_031267622.1 | DUF1024 family protein | Toxin Detail |
| PXV46_RS01895 (PXV46_01895) | 397653..397826 | + | 174 | WP_000028424.1 | hypothetical protein | - |
| PXV46_RS01900 (PXV46_01900) | 397827..397988 | + | 162 | WP_000889684.1 | hypothetical protein | - |
| PXV46_RS01905 (PXV46_01905) | 398003..398509 | + | 507 | WP_001061842.1 | dUTPase | - |
| PXV46_RS01910 (PXV46_01910) | 398546..398752 | + | 207 | WP_031920873.1 | DUF1381 domain-containing protein | - |
| PXV46_RS01915 (PXV46_01915) | 398749..398901 | + | 153 | WP_031838395.1 | transcriptional regulator | - |
| PXV46_RS01920 (PXV46_01920) | 398969..399169 | + | 201 | WP_000265258.1 | DUF1514 family protein | - |
| PXV46_RS01925 (PXV46_01925) | 399340..399804 | + | 465 | Protein_382 | hypothetical protein | - |
| PXV46_RS01930 (PXV46_01930) | 399913..400011 | - | 99 | WP_001801650.1 | hypothetical protein | - |
| PXV46_RS01935 (PXV46_01935) | 400145..400435 | + | 291 | WP_000665203.1 | VRR-NUC domain-containing protein | - |
| PXV46_RS01940 (PXV46_01940) | 400416..401783 | + | 1368 | WP_078099307.1 | DEAD/DEAH box helicase | - |
| PXV46_RS01945 (PXV46_01945) | 401796..402233 | + | 438 | WP_000513703.1 | transcriptional regulator | - |
| PXV46_RS01950 (PXV46_01950) | 402390..402704 | + | 315 | WP_000160683.1 | HNH endonuclease | - |
| PXV46_RS01955 (PXV46_01955) | 402833..403138 | + | 306 | WP_000778933.1 | P27 family phage terminase small subunit | - |
| PXV46_RS01960 (PXV46_01960) | 403128..404819 | + | 1692 | WP_031796929.1 | terminase large subunit | - |
| PXV46_RS01965 (PXV46_01965) | 404824..406062 | + | 1239 | WP_001100669.1 | phage portal protein | - |
| PXV46_RS01970 (PXV46_01970) | 406046..406819 | + | 774 | WP_000061872.1 | Clp protease ClpP | - |
| PXV46_RS01975 (PXV46_01975) | 406831..407994 | + | 1164 | WP_031903399.1 | phage major capsid protein | - |
| PXV46_RS01980 (PXV46_01980) | 408063..408341 | + | 279 | WP_000050973.1 | head-tail connector protein | - |
| PXV46_RS01985 (PXV46_01985) | 408353..408685 | + | 333 | WP_000395501.1 | hypothetical protein | - |
| PXV46_RS01990 (PXV46_01990) | 408682..409083 | + | 402 | WP_031903400.1 | hypothetical protein | - |
| PXV46_RS01995 (PXV46_01995) | 409084..409479 | + | 396 | WP_001023802.1 | DUF3168 domain-containing protein | - |
| PXV46_RS02000 (PXV46_02000) | 409514..410155 | + | 642 | WP_000807536.1 | phage tail protein | - |
| PXV46_RS02005 (PXV46_02005) | 410247..410702 | + | 456 | WP_000169128.1 | Ig-like domain-containing protein | - |
| PXV46_RS02010 (PXV46_02010) | 410760..411110 | + | 351 | WP_000589167.1 | hypothetical protein | - |
| PXV46_RS02015 (PXV46_02015) | 411152..411310 | + | 159 | WP_000438833.1 | hypothetical protein | - |
| PXV46_RS02020 (PXV46_02020) | 411324..417524 | + | 6201 | WP_031903401.1 | phage tail tape measure protein | - |
| PXV46_RS02025 (PXV46_02025) | 417524..418348 | + | 825 | WP_001190533.1 | phage tail family protein | - |
| PXV46_RS02030 (PXV46_02030) | 418357..419940 | + | 1584 | WP_000384474.1 | prophage endopeptidase tail family protein | - |
| PXV46_RS02035 (PXV46_02035) | 419940..420230 | + | 291 | WP_000179858.1 | hypothetical protein | - |
| PXV46_RS02040 (PXV46_02040) | 420246..422156 | + | 1911 | WP_000429558.1 | minor structural protein | - |
| PXV46_RS02045 (PXV46_02045) | 422156..423622 | + | 1467 | WP_021285990.1 | BppU family phage baseplate upper protein | - |
| PXV46_RS02050 (PXV46_02050) | 423622..424011 | + | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| PXV46_RS02055 (PXV46_02055) | 424004..424168 | + | 165 | WP_000916020.1 | XkdX family protein | - |
| PXV46_RS02060 (PXV46_02060) | 424214..424513 | + | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| PXV46_RS02065 (PXV46_02065) | 424649..424951 | + | 303 | WP_000339146.1 | phage holin | - |
| PXV46_RS02070 (PXV46_02070) | 424963..426417 | + | 1455 | WP_021285991.1 | N-acetylmuramoyl-L-alanine amidase | - |
| PXV46_RS02075 (PXV46_02075) | 427187..427309 | + | 123 | WP_000346419.1 | hypothetical protein | - |
| PXV46_RS02080 (PXV46_02080) | 427551..428378 | - | 828 | WP_000136026.1 | alpha/beta hydrolase | - |
| PXV46_RS02085 (PXV46_02085) | 428436..429650 | - | 1215 | WP_000286472.1 | NADH-dependent flavin oxidoreductase | - |
| PXV46_RS02090 (PXV46_02090) | 429746..429838 | + | 93 | WP_014936975.1 | hypothetical protein | - |
| PXV46_RS02095 (PXV46_02095) | 429952..430953 | + | 1002 | WP_000240067.1 | LLM class flavin-dependent oxidoreductase | - |
| PXV46_RS02100 (PXV46_02100) | 430987..431319 | + | 333 | WP_000731878.1 | glycine cleavage system protein H | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|