MGE detailed information
MGE type: Prophage MGE length: 54459 bp
Accession: NZ_CP119109 Location: 2576909..2631367 Organism: Staphylococcus aureus strain GENOMIC22-001 Replicon: chromosome
Accession: NZ_CP119109 Location: 2576909..2631367 Organism: Staphylococcus aureus strain GENOMIC22-001 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PXV45_RS12950 (2572007) | 2572007..2572339 | - | 333 | WP_000731878.1 | glycine cleavage system protein H | - |
| PXV45_RS12955 (2572373) | 2572373..2573374 | - | 1002 | WP_000240067.1 | LLM class flavin-dependent oxidoreductase | - |
| PXV45_RS12960 (2573488) | 2573488..2573580 | - | 93 | WP_014936975.1 | hypothetical protein | - |
| PXV45_RS12965 (2573676) | 2573676..2574890 | + | 1215 | WP_000286472.1 | NADH-dependent flavin oxidoreductase | - |
| PXV45_RS12970 (2574948) | 2574948..2575775 | + | 828 | WP_000136026.1 | alpha/beta hydrolase | - |
| PXV45_RS12975 (2576017) | 2576017..2576139 | - | 123 | WP_000346419.1 | hypothetical protein | - |
| PXV45_RS12980 (2576909) | 2576909..2578363 | - | 1455 | WP_021285991.1 | N-acetylmuramoyl-L-alanine amidase | - |
| PXV45_RS12985 (2578375) | 2578375..2578677 | - | 303 | WP_000339146.1 | phage holin | - |
| PXV45_RS12990 (2578813) | 2578813..2579112 | - | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| PXV45_RS12995 (2579158) | 2579158..2579322 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| PXV45_RS13000 (2579315) | 2579315..2579704 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| PXV45_RS13005 (2579704) | 2579704..2581170 | - | 1467 | WP_021285990.1 | BppU family phage baseplate upper protein | - |
| PXV45_RS13010 (2581170) | 2581170..2583080 | - | 1911 | WP_000429551.1 | minor structural protein | - |
| PXV45_RS13015 (2583096) | 2583096..2583386 | - | 291 | WP_000179860.1 | hypothetical protein | - |
| PXV45_RS13020 (2583386) | 2583386..2584969 | - | 1584 | WP_000384464.1 | prophage endopeptidase tail family protein | - |
| PXV45_RS13025 (2584978) | 2584978..2585802 | - | 825 | WP_001190533.1 | phage tail family protein | - |
| PXV45_RS13030 (2585802) | 2585802..2592002 | - | 6201 | WP_103149610.1 | phage tail tape measure protein | - |
| PXV45_RS13035 (2592016) | 2592016..2592174 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| PXV45_RS13040 (2592216) | 2592216..2592566 | - | 351 | WP_000589167.1 | hypothetical protein | - |
| PXV45_RS13045 (2592624) | 2592624..2593079 | - | 456 | WP_000169127.1 | Ig-like domain-containing protein | - |
| PXV45_RS13050 (2593171) | 2593171..2593812 | - | 642 | WP_000807536.1 | phage tail protein | - |
| PXV45_RS13055 (2593847) | 2593847..2594242 | - | 396 | WP_015978094.1 | DUF3168 domain-containing protein | - |
| PXV45_RS13060 (2594243) | 2594243..2594644 | - | 402 | WP_031776127.1 | hypothetical protein | - |
| PXV45_RS13065 (2594641) | 2594641..2594973 | - | 333 | WP_000395501.1 | hypothetical protein | - |
| PXV45_RS13070 (2594985) | 2594985..2595263 | - | 279 | WP_000050973.1 | head-tail connector protein | - |
| PXV45_RS13075 (2595332) | 2595332..2596495 | - | 1164 | WP_001142739.1 | phage major capsid protein | - |
| PXV45_RS13080 (2596507) | 2596507..2597280 | - | 774 | WP_031886567.1 | Clp protease ClpP | - |
| PXV45_RS13085 (2597264) | 2597264..2598502 | - | 1239 | WP_031919077.1 | phage portal protein | - |
| PXV45_RS13090 (2598507) | 2598507..2600198 | - | 1692 | WP_000153540.1 | terminase large subunit | - |
| PXV45_RS13095 (2600188) | 2600188..2600493 | - | 306 | WP_000778933.1 | P27 family phage terminase small subunit | - |
| PXV45_RS13100 (2600621) | 2600621..2600935 | - | 315 | WP_000160683.1 | HNH endonuclease | - |
| PXV45_RS13105 (2601092) | 2601092..2601529 | - | 438 | WP_000513703.1 | transcriptional regulator | - |
| PXV45_RS13110 (2601542) | 2601542..2602909 | - | 1368 | WP_074370994.1 | DEAD/DEAH box helicase | - |
| PXV45_RS13115 (2602890) | 2602890..2603180 | - | 291 | WP_001794602.1 | VRR-NUC domain-containing protein | - |
| PXV45_RS13120 (2603314) | 2603314..2603418 | + | 105 | WP_078099040.1 | hypothetical protein | - |
| PXV45_RS13125 (2603521) | 2603521..2605968 | - | 2448 | WP_103149611.1 | virulence-associated E family protein | - |
| PXV45_RS13130 (2606256) | 2606256..2606456 | - | 201 | WP_000265252.1 | DUF1514 family protein | - |
| PXV45_RS13135 (2606524) | 2606524..2606676 | - | 153 | WP_016187444.1 | hypothetical protein | - |
| PXV45_RS13140 (2606673) | 2606673..2607062 | - | 390 | WP_173677596.1 | hypothetical protein | - |
| PXV45_RS13145 (2607052) | 2607052..2607288 | - | 237 | WP_000483477.1 | hypothetical protein | - |
| PXV45_RS13150 (2607313) | 2607313..2607549 | - | 237 | WP_000195831.1 | DUF1381 domain-containing protein | - |
| PXV45_RS13155 (2607586) | 2607586..2608128 | - | 543 | WP_000185654.1 | dUTP pyrophosphatase | - |
| PXV45_RS13160 (2608133) | 2608133..2608369 | - | 237 | WP_001065023.1 | DUF1024 family protein | - |
| PXV45_RS13165 (2608362) | 2608362..2608670 | - | 309 | WP_000144708.1 | hypothetical protein | - |
| PXV45_RS13170 (2608667) | 2608667..2609014 | - | 348 | WP_000979209.1 | YopX family protein | - |
| PXV45_RS13175 (2609011) | 2609011..2609412 | - | 402 | WP_031796932.1 | hypothetical protein | - |
| PXV45_RS13180 (2609415) | 2609415..2609621 | - | 207 | WP_000693989.1 | hypothetical protein | - |
| PXV45_RS13185 (2609635) | 2609635..2609877 | - | 243 | WP_031775821.1 | SAV1978 family virulence-associated passenger protein | - |
| PXV45_RS13190 (2609892) | 2609892..2610092 | - | 201 | WP_000235324.1 | hypothetical protein | - |
| PXV45_RS13195 (2610095) | 2610095..2610352 | - | 258 | WP_000022728.1 | DUF3310 domain-containing protein | - |
| PXV45_RS13200 (2610352) | 2610352..2610753 | - | 402 | WP_000113974.1 | PVL family protein | - |
| PXV45_RS13205 (2610753) | 2610753..2610938 | - | 186 | WP_001164629.1 | DUF3113 family protein | - |
| PXV45_RS13210 (2610951) | 2610951..2612903 | - | 1953 | WP_103149614.1 | DNA polymerase | - |
| PXV45_RS13215 (2612972) | 2612972..2613529 | - | 558 | WP_000645049.1 | DUF2815 family protein | - |
| PXV45_RS13220 (2613556) | 2613556..2614722 | - | 1167 | WP_031794996.1 | DUF2800 domain-containing protein | - |
| PXV45_RS13225 (2614719) | 2614719..2615081 | - | 363 | WP_000985976.1 | hypothetical protein | - |
| PXV45_RS13230 (2615096) | 2615096..2615419 | - | 324 | WP_000174994.1 | hypothetical protein | - |
| PXV45_RS13235 (2615498) | 2615498..2615659 | - | 162 | WP_001285948.1 | DUF1270 domain-containing protein | - |
| PXV45_RS13240 (2615672) | 2615672..2615935 | - | 264 | WP_016187436.1 | helix-turn-helix domain-containing protein | - |
| PXV45_RS13245 (2615960) | 2615960..2616175 | - | 216 | WP_001097552.1 | hypothetical protein | - |
| PXV45_RS13250 (2616230) | 2616230..2616595 | + | 366 | WP_016170627.1 | hypothetical protein | Antitoxin Detail |
| PXV45_RS13255 (2616564) | 2616564..2616809 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| PXV45_RS13260 (2616865) | 2616865..2617074 | + | 210 | WP_000642492.1 | hypothetical protein | - |
| PXV45_RS13265 (2617064) | 2617064..2617207 | - | 144 | WP_000939498.1 | hypothetical protein | - |
| PXV45_RS13270 (2617236) | 2617236..2618012 | - | 777 | WP_001148544.1 | Rha family transcriptional regulator | - |
| PXV45_RS13275 (2618026) | 2618026..2618262 | - | 237 | WP_001121027.1 | helix-turn-helix transcriptional regulator | - |
| PXV45_RS13280 (2618414) | 2618414..2618728 | + | 315 | WP_000333630.1 | helix-turn-helix transcriptional regulator | - |
| PXV45_RS13285 (2618741) | 2618741..2619202 | + | 462 | WP_000525004.1 | hypothetical protein | Toxin Detail |
| PXV45_RS13290 (2619220) | 2619220..2619804 | + | 585 | WP_031918390.1 | hypothetical protein | - |
| PXV45_RS13295 (2620035) | 2620035..2620181 | + | 147 | WP_074370993.1 | hypothetical protein | - |
| PXV45_RS13300 (2620178) | 2620178..2620792 | - | 615 | WP_000191466.1 | hypothetical protein | - |
| PXV45_RS13305 (2620918) | 2620918..2622123 | + | 1206 | WP_031795352.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PXV45_RS13310 (2622217) | 2622217..2624151 | - | 1935 | Protein_2580 | Lipase 2 | VF |
| PXV45_RS13315 (2624568) | 2624568..2625881 | + | 1314 | WP_001077706.1 | YjiH family protein | - |
| PXV45_RS13320 (2626011) | 2626011..2626679 | - | 669 | WP_000936721.1 | N-acetylmannosamine-6-phosphate 2-epimerase | - |
| PXV45_RS13325 (2626819) | 2626819..2627619 | + | 801 | WP_000667388.1 | MurR/RpiR family transcriptional regulator | - |
| PXV45_RS13330 (2627896) | 2627896..2628756 | - | 861 | WP_000291432.1 | ROK family protein | - |
| PXV45_RS13335 (2628914) | 2628914..2629795 | + | 882 | WP_001030735.1 | N-acetylneuraminate lyase | - |
| PXV45_RS13340 (2629835) | 2629835..2631367 | + | 1533 | WP_000665744.1 | sodium:solute symporter | - |
| PXV45_RS13345 (2631473) | 2631473..2632693 | - | 1221 | WP_001022977.1 | NupC/NupG family nucleoside CNT transporter | - |
| PXV45_RS13350 (2632704) | 2632704..2633627 | - | 924 | WP_074370992.1 | pseudouridine-5'-phosphate glycosidase | - |
| PXV45_RS13355 (2633602) | 2633602..2634720 | - | 1119 | WP_001283977.1 | winged helix-turn-helix transcriptional regulator | - |
| PXV45_RS13360 (2635063) | 2635063..2636052 | - | 990 | WP_223202081.1 | PTS sugar transporter subunit IIC | - |
| PXV45_RS13365 (2636003) | 2636003..2636143 | + | 141 | WP_011446983.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|