MGE detailed information
MGE type: Prophage MGE length: 23914 bp
Accession: NZ_CP118539 Location: 445863..469776 Organism: Xylella fastidiosa strain ICMP 15197 Replicon: chromosome
Accession: NZ_CP118539 Location: 445863..469776 Organism: Xylella fastidiosa strain ICMP 15197 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PXH81_RS01815 (PXH81_01815) | 441235..443025 | + | 1791 | WP_004089284.1 | succinate dehydrogenase flavoprotein subunit | - |
| PXH81_RS01820 (PXH81_01820) | 443046..443831 | + | 786 | WP_004089282.1 | succinate dehydrogenase iron-sulfur subunit | - |
| PXH81_RS01825 (PXH81_01825) | 443952..444200 | + | 249 | WP_004089280.1 | succinate dehydrogenase assembly factor 2 | - |
| PXH81_RS01830 (PXH81_01830) | 444223..444603 | + | 381 | WP_011097604.1 | hypothetical protein | - |
| PXH81_RS01835 (PXH81_01835) | 444629..445870 | + | 1242 | WP_004089276.1 | lipoprotein-releasing ABC transporter permease subunit | - |
| PXH81_RS01840 (PXH81_01840) | 445863..446585 | + | 723 | WP_004089270.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| PXH81_RS01845 (PXH81_01845) | 446933..449410 | + | 2478 | WP_038231910.1 | DNA internalization-related competence protein ComEC/Rec2 | - |
| PXH81_RS01850 (PXH81_01850) | 449395..450057 | + | 663 | WP_004085189.1 | MotA/TolQ/ExbB proton channel family protein | - |
| PXH81_RS01855 (PXH81_01855) | 450062..450499 | + | 438 | WP_004089267.1 | biopolymer transporter ExbD | - |
| PXH81_RS01860 (PXH81_01860) | 450517..452265 | + | 1749 | WP_004089264.1 | Lipid A export ATP-binding/permease protein MsbA | VF |
| PXH81_RS01865 (PXH81_01865) | 452262..453281 | + | 1020 | WP_004089261.1 | Tetraacyldisaccharide 4'-kinase | VF |
| PXH81_RS01870 (PXH81_01870) | 453688..454377 | - | 690 | WP_012382453.1 | contractile injection system protein, VgrG/Pvc8 family | - |
| PXH81_RS01875 (PXH81_01875) | 454307..455278 | - | 972 | WP_011097609.1 | hypothetical protein | - |
| PXH81_RS01880 (PXH81_01880) | 455286..455843 | - | 558 | WP_011097610.1 | phage tail protein I | - |
| PXH81_RS01885 (PXH81_01885) | 455836..456729 | - | 894 | WP_274265311.1 | baseplate J/gp47 family protein | - |
| PXH81_RS01890 (PXH81_01890) | 456729..457091 | - | 363 | WP_014607615.1 | GPW/gp25 family protein | - |
| PXH81_RS01895 (PXH81_01895) | 457265..457546 | + | 282 | WP_004090695.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PXH81_RS01900 (PXH81_01900) | 457557..457832 | + | 276 | WP_004085172.1 | HigA family addiction module antitoxin | Antitoxin Detail |
| PXH81_RS01905 (PXH81_01905) | 457920..458222 | + | 303 | WP_004090696.1 | type II toxin-antitoxin system MqsR family toxin | Toxin Detail |
| PXH81_RS01910 (PXH81_01910) | 458225..458626 | + | 402 | WP_004090697.1 | type II toxin-antitoxin system MqsA family antitoxin | Antitoxin Detail |
| PXH81_RS01915 (PXH81_01915) | 458695..459282 | - | 588 | WP_011097612.1 | phage baseplate assembly protein V | - |
| PXH81_RS01920 (PXH81_01920) | 459279..459821 | - | 543 | WP_011097613.1 | hypothetical protein | - |
| PXH81_RS01925 (PXH81_01925) | 459797..460318 | - | 522 | WP_011097614.1 | hypothetical protein | - |
| PXH81_RS01930 (PXH81_01930) | 460315..460638 | - | 324 | WP_011097935.1 | hypothetical protein | - |
| PXH81_RS01935 (PXH81_01935) | 460638..460898 | - | 261 | WP_011097616.1 | hypothetical protein | - |
| PXH81_RS01940 (PXH81_01940) | 460916..462790 | - | 1875 | WP_038232803.1 | phage major capsid protein | - |
| PXH81_RS01945 (PXH81_01945) | 462774..463418 | - | 645 | WP_038232805.1 | phage portal protein | - |
| PXH81_RS01950 (PXH81_01950) | 463469..463933 | + | 465 | WP_261981526.1 | hypothetical protein | - |
| PXH81_RS01955 (PXH81_01955) | 463930..464208 | + | 279 | WP_011097962.1 | VRR-NUC domain-containing protein | - |
| PXH81_RS01960 (PXH81_01960) | 464210..464518 | - | 309 | WP_011097621.1 | hypothetical protein | - |
| PXH81_RS01965 (PXH81_01965) | 464603..466021 | + | 1419 | WP_011097622.1 | DEAD/DEAH box helicase | - |
| PXH81_RS01970 (PXH81_01970) | 466018..466272 | + | 255 | WP_011097623.1 | DUF4224 domain-containing protein | - |
| PXH81_RS01975 (PXH81_01975) | 466262..467281 | + | 1020 | WP_011097624.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PXH81_RS01980 (PXH81_01980) | 468054..468695 | + | 642 | WP_011097625.1 | hypothetical protein | VF |
| PXH81_RS01985 (PXH81_01985) | 468723..469199 | + | 477 | WP_004089961.1 | histidine phosphatase family protein | - |
| PXH81_RS01990 (PXH81_01990) | 469204..469776 | + | 573 | WP_011097627.1 | YceI family protein | - |
| PXH81_RS01995 (PXH81_01995) | 469773..471731 | + | 1959 | WP_011097628.1 | phospholipase D family protein | - |
| PXH81_RS02000 (PXH81_02000) | 472664..473053 | - | 390 | WP_004089975.1 | helix-turn-helix transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|