MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 70524 bp
Accession: NZ_CP117988 Location: 704190..774713 Organism: Vibrio campbellii strain 20220413_1 Replicon: chromosome
Accession: NZ_CP117988 Location: 704190..774713 Organism: Vibrio campbellii strain 20220413_1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PUN50_RS03300 (PUN50_03300) | 699594..700097 | + | 504 | WP_005431913.1 | N-acetyltransferase | - |
| PUN50_RS03305 (PUN50_03305) | 700169..700621 | - | 453 | WP_005431911.1 | hypothetical protein | - |
| PUN50_RS03310 (PUN50_03310) | 700685..701083 | + | 399 | WP_005431900.1 | DNA polymerase III subunit psi | - |
| PUN50_RS03315 (PUN50_03315) | 701096..701551 | + | 456 | WP_274290856.1 | ribosomal protein S18-alanine N-acetyltransferase | - |
| PUN50_RS03320 (PUN50_03320) | 701734..702807 | + | 1074 | WP_274290857.1 | GGDEF domain-containing protein | - |
| PUN50_RS03325 (PUN50_03325) | 703457..703651 | + | 195 | WP_274290858.1 | DNA-binding protein | - |
| PUN50_RS03330 (PUN50_03330) | 703703..703915 | - | 213 | WP_040132767.1 | hypothetical protein | - |
| PUN50_RS03335 (PUN50_03335) | 704190..705431 | - | 1242 | WP_028870222.1 | Isoleucine--tRNA ligase ; Integrase | Integrase |
| PUN50_RS03340 (PUN50_03340) | 705433..705702 | - | 270 | WP_032479292.1 | hypothetical protein | - |
| PUN50_RS03345 (PUN50_03345) | 705705..706679 | - | 975 | WP_001963822.1 | ParM/StbA family protein | - |
| PUN50_RS03350 (PUN50_03350) | 707144..707587 | + | 444 | WP_045613981.1 | conjugative transfer protein MobI(A/C) | - |
| PUN50_RS03355 (PUN50_03355) | 707598..708905 | - | 1308 | WP_274290859.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| PUN50_RS03360 (PUN50_03360) | 708874..709323 | - | 450 | WP_005394623.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| PUN50_RS03365 (PUN50_03365) | 709979..710884 | + | 906 | WP_274290860.1 | 3'-5' exonuclease | - |
| PUN50_RS03370 (PUN50_03370) | 711098..711397 | + | 300 | WP_274290861.1 | hypothetical protein | - |
| PUN50_RS03375 (PUN50_03375) | 711716..712651 | + | 936 | WP_274290862.1 | WYL domain-containing protein | - |
| PUN50_RS03380 (PUN50_03380) | 712689..716021 | + | 3333 | WP_274290863.1 | SNF2-related protein | - |
| PUN50_RS03385 (PUN50_03385) | 716025..716711 | + | 687 | WP_274290864.1 | DUF4391 domain-containing protein | - |
| PUN50_RS03390 (PUN50_03390) | 716785..718677 | + | 1893 | WP_274290865.1 | site-specific DNA-methyltransferase | - |
| PUN50_RS03395 (PUN50_03395) | 718687..721764 | + | 3078 | WP_274290866.1 | DEAD/DEAH box helicase family protein | - |
| PUN50_RS03400 (PUN50_03400) | 721872..722717 | + | 846 | WP_274290867.1 | hypothetical protein | - |
| PUN50_RS03405 (PUN50_03405) | 722980..725130 | + | 2151 | WP_274290868.1 | MobH family relaxase | - |
| PUN50_RS03410 (PUN50_03410) | 725179..726999 | + | 1821 | WP_008844777.1 | conjugative transfer system coupling protein TraD | - |
| PUN50_RS03415 (PUN50_03415) | 727009..727569 | + | 561 | WP_149151580.1 | conjugative transfer protein | - |
| PUN50_RS03420 (PUN50_03420) | 727556..728191 | + | 636 | WP_274290869.1 | DUF4400 domain-containing protein | - |
| PUN50_RS03425 (PUN50_03425) | 728217..728495 | - | 279 | WP_000058216.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| PUN50_RS03430 (PUN50_03430) | 728492..728815 | - | 324 | WP_001896384.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PUN50_RS03435 (PUN50_03435) | 728996..729277 | + | 282 | WP_000433891.1 | type IV conjugative transfer system protein TraL | - |
| PUN50_RS03440 (PUN50_03440) | 729274..729900 | + | 627 | WP_274290870.1 | TraE/TraK family type IV conjugative transfer system protein | - |
| PUN50_RS03445 (PUN50_03445) | 729884..730780 | + | 897 | WP_274291235.1 | type-F conjugative transfer system secretin TraK | - |
| PUN50_RS03450 (PUN50_03450) | 730783..732072 | + | 1290 | WP_274290871.1 | TraB/VirB10 family protein | - |
| PUN50_RS03455 (PUN50_03455) | 732147..732719 | + | 573 | WP_024008834.1 | type IV conjugative transfer system lipoprotein TraV | - |
| PUN50_RS03460 (PUN50_03460) | 732716..733102 | + | 387 | WP_023584042.1 | TraA family conjugative transfer protein | - |
| PUN50_RS03465 (PUN50_03465) | 733143..733649 | - | 507 | WP_274290872.1 | GNAT family N-acetyltransferase | Toxin Detail |
| PUN50_RS03470 (PUN50_03470) | 733640..733906 | - | 267 | WP_000212004.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| PUN50_RS03475 (PUN50_03475) | 734275..734967 | + | 693 | WP_274290873.1 | DsbC family protein | - |
| PUN50_RS03480 (PUN50_03480) | 734967..737366 | + | 2400 | WP_193284099.1 | type IV secretion system protein TraC | - |
| PUN50_RS03485 (PUN50_03485) | 737359..737706 | + | 348 | WP_015066569.1 | hypothetical protein | - |
| PUN50_RS03490 (PUN50_03490) | 737690..738202 | + | 513 | WP_258519357.1 | S26 family signal peptidase | - |
| PUN50_RS03495 (PUN50_03495) | 738213..739337 | + | 1125 | WP_274291236.1 | TrbC family F-type conjugative pilus assembly protein | - |
| PUN50_RS03500 (PUN50_03500) | 739321..740349 | + | 1029 | WP_274290874.1 | TraU family protein | - |
| PUN50_RS03505 (PUN50_03505) | 740352..744044 | + | 3693 | WP_274290875.1 | conjugal transfer protein TraN | - |
| PUN50_RS03510 (PUN50_03510) | 744251..744441 | - | 191 | Protein_612 | transposase | - |
| PUN50_RS03515 (PUN50_03515) | 744688..745653 | + | 966 | WP_219845879.1 | DNA-processing protein DprA | - |
| PUN50_RS03520 (PUN50_03520) | 745650..750326 | + | 4677 | WP_140587201.1 | RecQ family ATP-dependent DNA helicase | - |
| PUN50_RS03525 (PUN50_03525) | 750323..750811 | + | 489 | WP_140587200.1 | hypothetical protein | - |
| PUN50_RS03530 (PUN50_03530) | 751088..751765 | - | 678 | WP_140587199.1 | endonuclease | - |
| PUN50_RS03535 (PUN50_03535) | 751874..752476 | - | 603 | WP_140587198.1 | hypothetical protein | - |
| PUN50_RS03540 (PUN50_03540) | 752843..753169 | + | 327 | WP_140587197.1 | plasmid-related protein | - |
| PUN50_RS03545 (PUN50_03545) | 753185..753604 | + | 420 | WP_000795986.1 | single-stranded DNA-binding protein | - |
| PUN50_RS03550 (PUN50_03550) | 753684..754502 | + | 819 | WP_000414662.1 | phage recombination protein Bet | - |
| PUN50_RS03555 (PUN50_03555) | 754585..754728 | + | 144 | WP_181161418.1 | hypothetical protein | - |
| PUN50_RS03560 (PUN50_03560) | 754789..755805 | + | 1017 | WP_140587196.1 | YqaJ viral recombinase family protein | - |
| PUN50_RS03565 (PUN50_03565) | 756015..756974 | + | 960 | WP_007104990.1 | CbbQ/NirQ/NorQ C-terminal domain-containing protein | - |
| PUN50_RS03570 (PUN50_03570) | 756974..757741 | + | 768 | WP_274290876.1 | hypothetical protein | - |
| PUN50_RS03575 (PUN50_03575) | 757840..758793 | + | 954 | WP_085627050.1 | DUF3150 domain-containing protein | - |
| PUN50_RS03580 (PUN50_03580) | 758855..759295 | + | 441 | WP_274290877.1 | hypothetical protein | - |
| PUN50_RS03585 (PUN50_03585) | 759365..761020 | + | 1656 | WP_274290878.1 | VWA domain-containing protein | - |
| PUN50_RS03590 (PUN50_03590) | 761106..761603 | + | 498 | WP_000791199.1 | DNA repair protein RadC | - |
| PUN50_RS03595 (PUN50_03595) | 761603..761944 | + | 342 | WP_274290879.1 | plasmid-related protein | - |
| PUN50_RS03600 (PUN50_03600) | 762036..762143 | + | 108 | Protein_630 | DNA primase | - |
| PUN50_RS03605 (PUN50_03605) | 762241..763479 | + | 1239 | WP_240307111.1 | IS256 family transposase ISVa19 | Transposase |
| PUN50_RS03610 (PUN50_03610) | 763528..764484 | + | 957 | WP_274290880.1 | toprim domain-containing protein | - |
| PUN50_RS03615 (PUN50_03615) | 764574..765281 | + | 708 | WP_274290881.1 | hypothetical protein | - |
| PUN50_RS03620 (PUN50_03620) | 765433..766515 | - | 1083 | WP_274290882.1 | FAD-dependent oxidoreductase | - |
| PUN50_RS03625 (PUN50_03625) | 766515..767192 | - | 678 | WP_274290883.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| PUN50_RS03630 (PUN50_03630) | 767182..767871 | - | 690 | WP_274290884.1 | cupin domain-containing protein | - |
| PUN50_RS03635 (PUN50_03635) | 768079..768891 | - | 813 | WP_274290885.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| PUN50_RS03640 (PUN50_03640) | 768909..769259 | - | 351 | WP_274290886.1 | carboxymuconolactone decarboxylase family protein | - |
| PUN50_RS03645 (PUN50_03645) | 769316..770089 | - | 774 | WP_274290887.1 | Endoribonuclease YbeY | VF |
| PUN50_RS03650 (PUN50_03650) | 770252..771490 | - | 1239 | WP_240307111.1 | IS256 family transposase ISVa19 | Transposase |
| PUN50_RS03655 (PUN50_03655) | 771724..772638 | + | 915 | WP_274290888.1 | transcriptional regulator GcvA | - |
| PUN50_RS03660 (PUN50_03660) | 772774..773541 | + | 768 | WP_274290889.1 | GAF domain-containing protein | - |
| PUN50_RS03665 (PUN50_03665) | 773590..774713 | + | 1124 | WP_274290890.1 | IS3 family transposase ISPca2 | Transposase |
| PUN50_RS03670 (PUN50_03670) | 774772..775200 | + | 429 | WP_274290891.1 | ATP-binding protein | - |
| PUN50_RS03675 (PUN50_03675) | 775476..775970 | - | 495 | WP_100916032.1 | GNAT family N-acetyltransferase | - |
| PUN50_RS03680 (PUN50_03680) | 776412..776984 | - | 573 | WP_274290892.1 | hypothetical protein | - |
| PUN50_RS03685 (PUN50_03685) | 777438..778382 | + | 945 | WP_274290893.1 | thioredoxin family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|