MGE detailed information
MGE type: Prophage MGE length: 23264 bp
Accession: NZ_CP117852 Location: 1233090..1256353 Organism: Salmonella enterica subsp. enterica serovar Mbandaka strain SM_F28R Replicon: chromosome
Accession: NZ_CP117852 Location: 1233090..1256353 Organism: Salmonella enterica subsp. enterica serovar Mbandaka strain SM_F28R Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PTZ66_RS05900 (1228151) | 1228151..1228537 | - | 387 | WP_181728339.1 | hypothetical protein | - |
| PTZ66_RS05905 (1228611) | 1228611..1230362 | - | 1752 | Protein_1139 | Tn3-like element TnAs1 family transposase | - |
| PTZ66_RS05910 (1230366) | 1230366..1230758 | + | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| PTZ66_RS05915 (1230896) | 1230896..1231780 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| PTZ66_RS05920 (1231812) | 1231812..1233011 | - | 1200 | WP_000804064.1 | tetracycline efflux MFS transporter Tet(A) | - |
| PTZ66_RS05925 (1233117) | 1233117..1233767 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| PTZ66_RS05930 (1233809) | 1233809..1234051 | - | 243 | WP_000844627.1 | transposase | - |
| PTZ66_RS05935 (1234357) | 1234357..1235193 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| PTZ66_RS05940 (1235193) | 1235193..1235546 | - | 354 | Protein_1146 | phosphotransferase | - |
| PTZ66_RS05945 (1235599) | 1235599..1236303 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| PTZ66_RS05950 (1236367) | 1236367..1236735 | + | 369 | Protein_1148 | dihydrofolate reductase | - |
| PTZ66_RS05955 (1236846) | 1236846..1237298 | + | 453 | WP_000237816.1 | hypothetical protein | ARG |
| PTZ66_RS05960 (1237619) | 1237619..1237912 | + | 294 | Protein_1150 | Multidrug resistance protein MdtL | VF |
| PTZ66_RS05965 (1237975) | 1237975..1238679 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PTZ66_RS05970 (1238801) | 1238801..1239706 | + | 906 | WP_000219391.1 | hypothetical protein | ARG |
| PTZ66_RS05975 (1239703) | 1239703..1240939 | + | 1237 | Protein_1153 | macrolide resistance MFS transporter Mrx(A) | - |
| PTZ66_RS05980 (1240939) | 1240939..1241523 | + | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
| PTZ66_RS05985 (1242016) | 1242016..1242321 | - | 306 | WP_065311134.1 | DDE-type integrase/transposase/recombinase | - |
| PTZ66_RS05990 (1242346) | 1242346..1243050 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PTZ66_RS05995 (1243103) | 1243103..1243798 | + | 696 | Protein_1157 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| PTZ66_RS06000 (1243976) | 1243976..1244245 | + | 270 | WP_001275017.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| PTZ66_RS06005 (1244249) | 1244249..1244767 | + | 519 | WP_000369560.1 | GNAT family N-acetyltransferase | Toxin Detail |
| PTZ66_RS06010 (1244764) | 1244764..1245147 | - | 384 | WP_000778873.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| PTZ66_RS06015 (1245569) | 1245569..1246678 | + | 1110 | WP_000822976.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| PTZ66_RS06020 (1246738) | 1246738..1247664 | + | 927 | WP_000003007.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| PTZ66_RS06025 (1247661) | 1247661..1248938 | + | 1278 | WP_000803764.1 | branched chain amino acid ABC transporter permease LivM | - |
| PTZ66_RS06030 (1248935) | 1248935..1249702 | + | 768 | WP_000082083.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| PTZ66_RS06035 (1249704) | 1249704..1250417 | + | 714 | WP_000416114.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| PTZ66_RS06040 (1250548) | 1250548..1250769 | + | 222 | WP_001520924.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PTZ66_RS06045 (1250766) | 1250766..1251134 | + | 369 | WP_000174963.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| PTZ66_RS06050 (1251393) | 1251393..1252709 | + | 1317 | WP_000624747.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| PTZ66_RS06055 (1252814) | 1252814..1253701 | + | 888 | WP_000094074.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| PTZ66_RS06060 (1253698) | 1253698..1254543 | + | 846 | WP_000572196.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| PTZ66_RS06065 (1254546) | 1254546..1255616 | + | 1071 | WP_000907842.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| PTZ66_RS06070 (1255613) | 1255613..1256353 | + | 741 | WP_000073542.1 | glycerophosphodiester phosphodiesterase | - |
| PTZ66_RS06075 (1256366) | 1256366..1256782 | - | 417 | WP_017441613.1 | DUF2756 family protein | - |
| PTZ66_RS06080 (1256908) | 1256908..1258650 | + | 1743 | WP_017441612.1 | gamma-glutamyltransferase | - |
| PTZ66_RS06085 (1258695) | 1258695..1259729 | - | 1035 | WP_017441611.1 | phosphotriesterase | - |
| PTZ66_RS06090 (1259726) | 1259726..1260697 | - | 972 | WP_001038949.1 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|