MGE detailed information
MGE type: Prophage MGE length: 42915 bp
Accession: NZ_CP117821 Location: 1272878..1315792 Organism: Xylella fastidiosa strain ICMP 8731 Replicon: chromosome
Accession: NZ_CP117821 Location: 1272878..1315792 Organism: Xylella fastidiosa strain ICMP 8731 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PT013_RS05740 (PT013_05740) | 1269008..1269586 | - | 579 | WP_011097981.1 | glutathione peroxidase | - |
| PT013_RS05745 (PT013_05745) | 1270301..1271095 | + | 795 | WP_274205391.1 | ABC transporter ATP-binding protein | - |
| PT013_RS05750 (PT013_05750) | 1271092..1272069 | + | 978 | WP_004087353.1 | hypothetical protein | - |
| PT013_RS05755 (PT013_05755) | 1272328..1272774 | + | 447 | WP_004087355.1 | hypothetical protein | - |
| PT013_RS05760 (PT013_05760) | 1272878..1274122 | - | 1245 | WP_011097983.1 | tail fiber protein | - |
| PT013_RS05765 (PT013_05765) | 1274126..1274686 | - | 561 | WP_011097869.1 | DUF2612 domain-containing protein | - |
| PT013_RS05770 (PT013_05770) | 1274683..1275828 | - | 1146 | WP_011097984.1 | baseplate J/gp47 family protein | - |
| PT013_RS05775 (PT013_05775) | 1275927..1276223 | + | 297 | WP_004089252.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PT013_RS05780 (PT013_05780) | 1276227..1276532 | + | 306 | WP_004089254.1 | putative addiction module antidote protein | Antitoxin Detail |
| PT013_RS05785 (PT013_05785) | 1276543..1276896 | - | 354 | WP_011097986.1 | hypothetical protein | - |
| PT013_RS05790 (PT013_05790) | 1276893..1277534 | - | 642 | WP_004090764.1 | Gp138 family membrane-puncturing spike protein | - |
| PT013_RS05795 (PT013_05795) | 1277531..1278361 | - | 831 | WP_004090766.1 | hypothetical protein | - |
| PT013_RS05800 (PT013_05800) | 1278358..1278675 | - | 318 | WP_011097873.1 | hypothetical protein | - |
| PT013_RS05805 (PT013_05805) | 1278675..1279445 | - | 771 | WP_004090769.1 | hypothetical protein | - |
| PT013_RS05810 (PT013_05810) | 1279556..1279783 | + | 228 | WP_004091377.1 | DUF6290 family protein | Antitoxin Detail |
| PT013_RS05815 (PT013_05815) | 1279767..1280033 | + | 267 | WP_011097988.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PT013_RS05820 (PT013_05820) | 1280044..1281837 | - | 1794 | WP_228446142.1 | phage tail tape measure protein | - |
| PT013_RS05825 (PT013_05825) | 1282081..1282503 | - | 423 | WP_004085005.1 | putative phage tail assembly chaperone | - |
| PT013_RS05830 (PT013_05830) | 1282500..1282937 | - | 438 | WP_011097990.1 | DUF3277 family protein | - |
| PT013_RS05835 (PT013_05835) | 1282947..1283180 | - | 234 | WP_011097991.1 | DUF3383 family protein | - |
| PT013_RS05840 (PT013_05840) | 1283197..1284075 | - | 879 | WP_012382645.1 | IS607 family transposase ISCARN56 | Transposase |
| PT013_RS05845 (PT013_05845) | 1284241..1284402 | - | 162 | WP_014607806.1 | IS607 family transposase ISCARN56 | Transposase |
| PT013_RS05850 (PT013_05850) | 1284396..1285001 | - | 606 | Protein_1139 | IS607 family transposase ISCfe1 | Transposase |
| PT013_RS05855 (PT013_05855) | 1284994..1285611 | + | 618 | WP_261981524.1 | hypothetical protein | - |
| PT013_RS05860 (PT013_05860) | 1285608..1285886 | + | 279 | WP_011097962.1 | VRR-NUC domain-containing protein | - |
| PT013_RS05865 (PT013_05865) | 1285888..1286250 | - | 363 | WP_012382646.1 | hypothetical protein | - |
| PT013_RS05870 (PT013_05870) | 1286335..1287753 | + | 1419 | WP_011097622.1 | DEAD/DEAH box helicase | - |
| PT013_RS05875 (PT013_05875) | 1287750..1287914 | + | 165 | WP_012382647.1 | hypothetical protein | - |
| PT013_RS05880 (PT013_05880) | 1287907..1288164 | + | 258 | WP_011097965.1 | DUF4224 domain-containing protein | - |
| PT013_RS05885 (PT013_05885) | 1288154..1289173 | + | 1020 | WP_011097994.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PT013_RS05890 (PT013_05890) | 1289240..1291177 | - | 1938 | WP_004088646.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| PT013_RS05895 (PT013_05895) | 1291339..1293720 | + | 2382 | WP_011097995.1 | TonB-dependent receptor | - |
| PT013_RS05900 (PT013_05900) | 1293810..1294478 | - | 669 | WP_004088644.1 | DsbA family oxidoreductase | - |
| PT013_RS05905 (PT013_05905) | 1295103..1297469 | + | 2367 | WP_011097996.1 | TonB-dependent receptor | - |
| PT013_RS05910 (PT013_05910) | 1298491..1300209 | + | 1719 | WP_011097997.1 | YbaL family putative K(+) efflux transporter | - |
| PT013_RS05915 (PT013_05915) | 1300584..1301678 | + | 1095 | WP_004086092.1 | phosphate ABC transporter substrate-binding protein PstS | - |
| PT013_RS05920 (PT013_05920) | 1301790..1302764 | + | 975 | WP_004086093.1 | phosphate ABC transporter permease subunit PstC | - |
| PT013_RS05925 (PT013_05925) | 1302764..1303627 | + | 864 | WP_004086094.1 | phosphate ABC transporter permease PstA | - |
| PT013_RS05930 (PT013_05930) | 1303648..1304478 | + | 831 | WP_011097998.1 | Phosphate import ATP-binding protein PstB | VF |
| PT013_RS05935 (PT013_05935) | 1304496..1305218 | + | 723 | WP_004086097.1 | phosphate signaling complex protein PhoU | - |
| PT013_RS05940 (PT013_05940) | 1305440..1306072 | + | 633 | WP_004086100.1 | ribonuclease T | - |
| PT013_RS05945 (PT013_05945) | 1306554..1307351 | + | 798 | WP_011098000.1 | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | - |
| PT013_RS05950 (PT013_05950) | 1307388..1307771 | + | 384 | WP_004086104.1 | Co2+/Mg2+ efflux protein ApaG | - |
| PT013_RS05955 (PT013_05955) | 1307786..1308673 | + | 888 | WP_011098001.1 | symmetrical bis(5'-nucleosyl)-tetraphosphatase | - |
| PT013_RS05960 (PT013_05960) | 1309217..1310491 | + | 1275 | WP_004088628.1 | lipase family protein | - |
| PT013_RS05965 (PT013_05965) | 1310721..1311470 | - | 750 | WP_004088627.1 | 3-deoxy-D-manno-octulosonic acid kinase | VF |
| PT013_RS05970 (PT013_05970) | 1311492..1312544 | + | 1053 | WP_004088625.1 | hypothetical protein | VF |
| PT013_RS05975 (PT013_05975) | 1312562..1312969 | - | 408 | WP_011098003.1 | DUF6165 family protein | - |
| PT013_RS05985 (PT013_05985) | 1313854..1314546 | + | 693 | WP_011098004.1 | serine/threonine-protein phosphatase | - |
| PT013_RS05990 (PT013_05990) | 1314624..1315343 | - | 720 | WP_004088619.1 | DNA polymerase III subunit epsilon | - |
| PT013_RS05995 (PT013_05995) | 1315340..1315792 | - | 453 | WP_004088617.1 | ribonuclease HI | - |
| PT013_RS06000 (PT013_06000) | 1315806..1316456 | - | 651 | WP_004088616.1 | hypothetical protein | - |
| PT013_RS06005 (PT013_06005) | 1316468..1317244 | + | 777 | WP_011098005.1 | hydroxyacylglutathione hydrolase | - |
| PT013_RS06010 (PT013_06010) | 1317612..1317800 | + | 189 | WP_228762627.1 | EexN family lipoprotein | - |
| PT013_RS06015 (PT013_06015) | 1318646..1318873 | + | 228 | WP_004088610.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|