MGE detailed information
MGE type: Prophage MGE length: 44341 bp
Accession: NZ_CP117820 Location: 701573..745913 Organism: Xylella fastidiosa strain ICMP 8740 Replicon: chromosome
Accession: NZ_CP117820 Location: 701573..745913 Organism: Xylella fastidiosa strain ICMP 8740 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PT012_RS03045 (PT012_03045) | 696946..697449 | + | 504 | WP_004084001.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
| PT012_RS03050 (PT012_03050) | 697661..698200 | - | 540 | WP_004083998.1 | Smr/MutS family protein | - |
| PT012_RS03055 (PT012_03055) | 698685..699701 | - | 1017 | WP_004083996.1 | SMP-30/gluconolactonase/LRE family protein | - |
| PT012_RS03060 (PT012_03060) | 699861..701507 | - | 1647 | WP_051248037.1 | electron transfer flavoprotein-ubiquinone oxidoreductase | - |
| PT012_RS03065 (PT012_03065) | 701615..702199 | + | 585 | WP_027700778.1 | alpha-ketoglutarate-dependent dioxygenase AlkB | - |
| PT012_RS03070 (PT012_03070) | 702394..703035 | - | 642 | WP_004083987.1 | ABC-type transport auxiliary lipoprotein family protein | - |
| PT012_RS03075 (PT012_03075) | 703032..703958 | - | 927 | WP_004083985.1 | MlaD family protein | - |
| PT012_RS03080 (PT012_03080) | 703962..704792 | - | 831 | WP_004083974.1 | ABC transporter ATP-binding protein | - |
| PT012_RS03085 (PT012_03085) | 704798..705916 | - | 1119 | WP_004083972.1 | ABC transporter permease | - |
| PT012_RS03090 (PT012_03090) | 706026..707288 | + | 1263 | WP_012337721.1 | threonine/serine exporter family protein | - |
| PT012_RS03095 (PT012_03095) | 707943..708149 | + | 207 | WP_071869858.1 | hypothetical protein | - |
| PT012_RS03100 (PT012_03100) | 708213..708425 | + | 213 | WP_228304324.1 | hypothetical protein | - |
| PT012_RS03105 (PT012_03105) | 708489..708698 | + | 210 | WP_225621843.1 | hypothetical protein | - |
| PT012_RS03110 (PT012_03110) | 709370..710347 | - | 978 | WP_080654448.1 | hypothetical protein ; Integrase | Integrase |
| PT012_RS03115 (PT012_03115) | 710349..710600 | - | 252 | WP_038283952.1 | DUF4224 domain-containing protein | - |
| PT012_RS03120 (PT012_03120) | 710686..711030 | - | 345 | Protein_594 | single-stranded DNA-binding protein | - |
| PT012_RS03125 (PT012_03125) | 711097..711696 | - | 600 | WP_274169900.1 | Bro-N domain-containing protein | - |
| PT012_RS03130 (PT012_03130) | 712050..713738 | - | 1689 | WP_274169895.1 | YqaJ viral recombinase family protein | - |
| PT012_RS03135 (PT012_03135) | 713735..714607 | - | 873 | WP_274169896.1 | phage recombination protein Bet | - |
| PT012_RS03140 (PT012_03140) | 714623..715444 | - | 822 | WP_027700618.1 | DUF2303 family protein | - |
| PT012_RS03145 (PT012_03145) | 715485..715829 | - | 345 | WP_027700617.1 | hypothetical protein | - |
| PT012_RS03150 (PT012_03150) | 715850..716191 | - | 342 | WP_274169890.1 | hypothetical protein | - |
| PT012_RS03155 (PT012_03155) | 716160..716555 | - | 396 | WP_241557581.1 | hypothetical protein | - |
| PT012_RS03160 (PT012_03160) | 716731..716922 | - | 192 | WP_004086365.1 | hypothetical protein | - |
| PT012_RS03165 (PT012_03165) | 716919..717359 | - | 441 | WP_248638117.1 | hypothetical protein | - |
| PT012_RS03170 (PT012_03170) | 717620..717964 | - | 345 | WP_027700613.1 | hypothetical protein | - |
| PT012_RS03175 (PT012_03175) | 718210..718578 | - | 369 | WP_020852210.1 | DUF86 domain-containing protein | - |
| PT012_RS03180 (PT012_03180) | 718575..718865 | - | 291 | WP_004086345.1 | nucleotidyltransferase | - |
| PT012_RS03185 (PT012_03185) | 718888..719304 | - | 417 | WP_234056372.1 | hypothetical protein | - |
| PT012_RS03190 (PT012_03190) | 719464..720228 | - | 765 | WP_051248012.1 | XRE family transcriptional regulator | - |
| PT012_RS03195 (PT012_03195) | 720333..720608 | - | 276 | WP_258057578.1 | hypothetical protein | - |
| PT012_RS03200 (PT012_03200) | 720789..720980 | + | 192 | WP_169719190.1 | hypothetical protein | - |
| PT012_RS03205 (PT012_03205) | 721008..721196 | + | 189 | WP_020851634.1 | hypothetical protein | - |
| PT012_RS03210 (PT012_03210) | 721226..721441 | + | 216 | WP_242412826.1 | hypothetical protein | - |
| PT012_RS03215 (PT012_03215) | 721438..723177 | + | 1740 | WP_274169897.1 | BRO family protein | - |
| PT012_RS03220 (PT012_03220) | 723177..723965 | + | 789 | WP_128723964.1 | Bro-N domain-containing protein | - |
| PT012_RS03225 (PT012_03225) | 723962..724222 | + | 261 | WP_248638125.1 | hypothetical protein | - |
| PT012_RS03230 (PT012_03230) | 724224..725048 | + | 825 | WP_027700661.1 | hypothetical protein | - |
| PT012_RS03235 (PT012_03235) | 725045..726511 | + | 1467 | WP_027700662.1 | replicative DNA helicase | - |
| PT012_RS03240 (PT012_03240) | 726517..726927 | + | 411 | WP_038211646.1 | hypothetical protein | - |
| PT012_RS03245 (PT012_03245) | 727056..727754 | + | 699 | WP_258057571.1 | hypothetical protein | - |
| PT012_RS03250 (PT012_03250) | 727920..728420 | + | 501 | WP_234499714.1 | lysozyme | - |
| PT012_RS03255 (PT012_03255) | 728413..728742 | + | 330 | WP_004085022.1 | phage holin family protein | - |
| PT012_RS03260 (PT012_03260) | 728732..729193 | + | 462 | WP_140162026.1 | hypothetical protein | - |
| PT012_RS03265 (PT012_03265) | 729195..729407 | + | 213 | WP_040123254.1 | hypothetical protein | - |
| PT012_RS03270 (PT012_03270) | 729499..729897 | + | 399 | WP_004086920.1 | hypothetical protein | - |
| PT012_RS03275 (PT012_03275) | 729848..731398 | + | 1551 | WP_027700655.1 | phage terminase large subunit | - |
| PT012_RS03280 (PT012_03280) | 731395..732783 | + | 1389 | WP_274169888.1 | DUF1073 domain-containing protein | - |
| PT012_RS03285 (PT012_03285) | 732832..733113 | - | 282 | WP_004085017.1 | helix-turn-helix domain-containing protein | - |
| PT012_RS03290 (PT012_03290) | 733110..733448 | - | 339 | WP_128723885.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PT012_RS03295 (PT012_03295) | 733521..734366 | + | 846 | WP_274169887.1 | phage minor head protein | - |
| PT012_RS03300 (PT012_03300) | 734276..735574 | + | 1299 | WP_272819578.1 | DUF2213 domain-containing protein | - |
| PT012_RS03305 (PT012_03305) | 735584..736066 | + | 483 | WP_004090290.1 | hypothetical protein | - |
| PT012_RS03310 (PT012_03310) | 736076..736414 | + | 339 | WP_274169886.1 | hypothetical protein | - |
| PT012_RS03315 (PT012_03315) | 736432..736674 | + | 243 | WP_234499994.1 | putative phage tail assembly chaperone | - |
| PT012_RS03320 (PT012_03320) | 736822..738711 | + | 1890 | WP_274169885.1 | hypothetical protein | - |
| PT012_RS03325 (PT012_03325) | 738722..738988 | - | 267 | WP_004087087.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PT012_RS03330 (PT012_03330) | 738972..739199 | - | 228 | WP_004091377.1 | DUF6290 family protein | Antitoxin Detail |
| PT012_RS03335 (PT012_03335) | 739310..740080 | + | 771 | WP_274169884.1 | hypothetical protein | - |
| PT012_RS03340 (PT012_03340) | 740080..740397 | + | 318 | WP_012382585.1 | hypothetical protein | - |
| PT012_RS03345 (PT012_03345) | 740394..741224 | + | 831 | WP_027700631.1 | hypothetical protein | - |
| PT012_RS03350 (PT012_03350) | 741221..741862 | + | 642 | WP_012382583.1 | Gp138 family membrane-puncturing spike protein | - |
| PT012_RS03355 (PT012_03355) | 741859..742212 | + | 354 | WP_027700632.1 | hypothetical protein | - |
| PT012_RS03360 (PT012_03360) | 742268..742561 | - | 294 | WP_004085592.1 | putative addiction module antidote protein | Antitoxin Detail |
| PT012_RS03365 (PT012_03365) | 742564..742860 | - | 297 | WP_004085590.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PT012_RS03370 (PT012_03370) | 742963..744108 | + | 1146 | WP_027700633.1 | baseplate J/gp47 family protein | - |
| PT012_RS03375 (PT012_03375) | 744105..744665 | + | 561 | WP_027700634.1 | DUF2612 domain-containing protein | - |
| PT012_RS03380 (PT012_03380) | 744669..745913 | + | 1245 | WP_272819575.1 | phage tail protein | - |
| PT012_RS03385 (PT012_03385) | 746017..746463 | - | 447 | WP_004084994.1 | hypothetical protein | - |
| PT012_RS03390 (PT012_03390) | 746721..747689 | - | 969 | WP_004084992.1 | hypothetical protein | - |
| PT012_RS03395 (PT012_03395) | 747686..748561 | - | 876 | WP_004084990.1 | ABC transporter ATP-binding protein | - |
| PT012_RS03400 (PT012_03400) | 749312..749879 | + | 568 | Protein_650 | glutathione peroxidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|