MGE detailed information
MGE type: Conjugative plasmid MGE length: 151146 bp
Accession: NZ_CP117718 Location: 1..151146 Organism: Escherichia coli strain B1S11 Replicon: plasmid pB1S11
Accession: NZ_CP117718 Location: 1..151146 Organism: Escherichia coli strain B1S11 Replicon: plasmid pB1S11
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PTA69_RS24065 (151) | 151..1317 | + | 1167 | WP_001238646.1 | hypothetical protein | VF |
| PTA69_RS24070 (1317) | 1317..2288 | + | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| PTA69_RS24075 (2925) | 2925..3094 | + | 170 | Protein_2 | hypothetical protein | - |
| PTA69_RS24080 (3277) | 3277..3357 | - | 81 | Protein_3 | hypothetical protein | - |
| PTA69_RS24085 (3427) | 3427..3633 | + | 207 | WP_000275856.1 | hypothetical protein | - |
| PTA69_RS24090 (3659) | 3659..4198 | + | 540 | WP_000290840.1 | single-stranded DNA-binding protein | - |
| PTA69_RS24095 (4266) | 4266..4499 | + | 234 | WP_000005987.1 | DUF905 family protein | - |
| PTA69_RS24100 (4527) | 4527..4724 | + | 198 | Protein_7 | hypothetical protein | - |
| PTA69_RS24105 (4779) | 4779..5213 | + | 435 | WP_000845936.1 | conjugation system SOS inhibitor PsiB | - |
| PTA69_RS24110 (5210) | 5210..5972 | + | 763 | Protein_9 | plasmid SOS inhibition protein A | - |
| PTA69_RS24115 (5941) | 5941..6129 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - (5941) | 5941..6165 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (5941) | 5941..6165 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (5941) | 5941..6165 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (5941) | 5941..6165 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| PTA69_RS24120 (6151) | 6151..6300 | + | 150 | Protein_11 | plasmid maintenance protein Mok | - |
| PTA69_RS24125 (6242) | 6242..6367 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| PTA69_RS24130 (6587) | 6587..6817 | + | 231 | WP_071586998.1 | hypothetical protein | - |
| PTA69_RS24135 (6815) | 6815..6987 | - | 173 | Protein_14 | hypothetical protein | - |
| PTA69_RS24140 (7057) | 7057..7281 | + | 225 | WP_107193629.1 | single-stranded DNA-binding protein | - |
| PTA69_RS24145 (7753) | 7753..9225 | - | 1473 | WP_273925326.1 | caspase family protein | - |
| PTA69_RS24150 (9608) | 9608..10267 | - | 660 | Protein_17 | transposase | - |
| PTA69_RS24155 (10465) | 10465..11445 | - | 981 | WP_032177071.1 | IS110 family transposase IS1663 | Transposase |
| PTA69_RS24160 (11696) | 11696..11983 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| PTA69_RS24165 (12101) | 12101..12922 | + | 822 | WP_001234426.1 | DUF932 domain-containing protein | - |
| PTA69_RS24170 (13219) | 13219..13821 | - | 603 | WP_000243712.1 | hypothetical protein | VF |
| PTA69_RS24175 (14142) | 14142..14525 | + | 384 | WP_001151524.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| PTA69_RS24180 (14712) | 14712..15401 | + | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| PTA69_RS24185 (15494) | 15494..15895 | + | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| PTA69_RS24190 (15928) | 15928..16293 | + | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| PTA69_RS24195 (16308) | 16308..16619 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| PTA69_RS24200 (16641) | 16641..17207 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| PTA69_RS24205 (17194) | 17194..17922 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| PTA69_RS24210 (17922) | 17922..19349 | + | 1428 | WP_000146685.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| PTA69_RS24215 (19339) | 19339..19929 | + | 591 | WP_001376242.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| PTA69_RS24220 (19916) | 19916..20113 | + | 198 | WP_001324648.1 | conjugal transfer protein TrbD | - |
| PTA69_RS24225 (20125) | 20125..20376 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| PTA69_RS24230 (20373) | 20373..20888 | + | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| PTA69_RS24235 (21023) | 21023..21244 | + | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| PTA69_RS24240 (21404) | 21404..24031 | + | 2628 | WP_001064245.1 | type IV secretion system protein TraC | - |
| PTA69_RS24245 (24028) | 24028..24414 | + | 387 | WP_000099686.1 | type-F conjugative transfer system protein TrbI | - |
| PTA69_RS24250 (24411) | 24411..25043 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| PTA69_RS24255 (25040) | 25040..26032 | + | 993 | WP_000830183.1 | conjugal transfer pilus assembly protein TraU | - |
| PTA69_RS24260 (26041) | 26041..26679 | + | 639 | WP_000777700.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| PTA69_RS24265 (26676) | 26676..28484 | + | 1809 | WP_000821841.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| PTA69_RS24270 (28511) | 28511..28768 | + | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| PTA69_RS24275 (28761) | 28761..29504 | + | 744 | WP_001030393.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| PTA69_RS24280 (29520) | 29520..29867 | + | 348 | WP_001287910.1 | conjugal transfer protein TrbA | - |
| PTA69_RS24285 (29869) | 29869..30183 | - | 315 | WP_001324103.1 | hypothetical protein | - |
| PTA69_RS24290 (30264) | 30264..30548 | + | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| PTA69_RS24295 (30535) | 30535..31080 | + | 546 | WP_000059851.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| PTA69_RS24300 (31010) | 31010..31351 | + | 342 | WP_001443031.1 | P-type conjugative transfer protein TrbJ | - |
| PTA69_RS24305 (31338) | 31338..31718 | + | 381 | WP_001389370.1 | F-type conjugal transfer protein TrbF | - |
| PTA69_RS24310 (31718) | 31718..33091 | + | 1374 | WP_001517790.1 | conjugal transfer pilus assembly protein TraH | - |
| PTA69_RS24315 (33088) | 33088..35910 | + | 2823 | WP_001007018.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| PTA69_RS24320 (35926) | 35926..36423 | + | 498 | WP_000605857.1 | entry exclusion protein | - |
| PTA69_RS24325 (36455) | 36455..37186 | + | 732 | WP_273925373.1 | conjugal transfer complement resistance protein TraT | - |
| PTA69_RS24330 (37439) | 37439..39592 | + | 2154 | WP_000009324.1 | type IV conjugative transfer system coupling protein TraD | - |
| PTA69_RS24335 (39601) | 39601..39999 | - | 399 | WP_000911313.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| PTA69_RS24340 (39999) | 39999..40226 | - | 228 | WP_000450520.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| PTA69_RS24345 (40308) | 40308..45578 | + | 5271 | WP_000986962.1 | Multifunctional conjugation protein TraI | Relaxase |
| PTA69_RS24350 (45598) | 45598..46344 | + | 747 | WP_000205749.1 | conjugal transfer pilus acetylase TraX | - |
| PTA69_RS24355 (46403) | 46403..47263 | + | 861 | WP_000704514.1 | Quorum-quenching protein AidA | VF |
| PTA69_RS24360 (47366) | 47366..47926 | + | 561 | WP_000139315.1 | fertility inhibition protein FinO | - |
| PTA69_RS24365 (48062) | 48062..48274 | + | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
| PTA69_RS24370 (48520) | 48520..48594 | + | 75 | Protein_61 | endonuclease | - |
| - (48850) | 48850..48911 | - | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (48850) | 48850..48911 | - | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (48850) | 48850..48911 | - | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (48850) | 48850..48911 | - | 62 | NuclAT_1 | - | Antitoxin Detail |
| PTA69_RS24375 (48955) | 48955..49104 | + | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| PTA69_RS24380 (49388) | 49388..49645 | + | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| PTA69_RS24385 (49662) | 49662..49913 | - | 252 | WP_223195197.1 | replication protein RepA | - |
| PTA69_RS24390 (49904) | 49904..49951 | + | 48 | WP_229471593.1 | hypothetical protein | - |
| PTA69_RS24395 (49944) | 49944..50426 | + | 483 | WP_001273588.1 | hypothetical protein | - |
| PTA69_RS24400 (50419) | 50419..51276 | + | 858 | WP_000774297.1 | incFII family plasmid replication initiator RepA | - |
| PTA69_RS24405 (51977) | 51977..52117 | + | 141 | WP_001333237.1 | hypothetical protein | - |
| PTA69_RS24410 (52215) | 52215..52868 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| PTA69_RS24415 (52961) | 52961..53218 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| PTA69_RS24420 (53151) | 53151..53552 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| PTA69_RS24425 (53675) | 53675..54379 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PTA69_RS24430 (54385) | 54385..54525 | + | 141 | WP_001044210.1 | hypothetical protein | - |
| PTA69_RS24435 (55011) | 55011..55743 | + | 733 | Protein_74 | recombinase family protein | - |
| PTA69_RS24440 (55740) | 55740..55964 | + | 225 | Protein_75 | hypothetical protein | - |
| PTA69_RS24445 (56170) | 56170..57661 | + | 1492 | Protein_76 | IS91 family transposase ISVsa3 | Transposase |
| PTA69_RS24450 (57692) | 57692..58576 | + | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| PTA69_RS24455 (58793) | 58793..60007 | + | 1215 | WP_000214121.1 | Bicyclomycin resistance protein | ARG |
| PTA69_RS24460 (60035) | 60035..60340 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator HdfR | VF |
| PTA69_RS24465 (60452) | 60452..60640 | + | 189 | Protein_80 | IS91 family transposase | - |
| PTA69_RS24470 (60607) | 60607..61806 | - | 1200 | WP_032153701.1 | Tetracycline resistance protein, class C | ARG |
| PTA69_RS24475 (61912) | 61912..62562 | + | 651 | WP_159186494.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| PTA69_RS24480 (62594) | 62594..62836 | - | 243 | WP_000844627.1 | transposase | - |
| PTA69_RS24485 (62999) | 62999..63544 | + | 546 | WP_001493763.1 | plasmid pRiA4b ORF-3 family protein | - |
| PTA69_RS24490 (63681) | 63681..64253 | + | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| PTA69_RS24495 (64290) | 64290..65681 | + | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| PTA69_RS24500 (65714) | 65714..66142 | + | 429 | Protein_87 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| PTA69_RS24505 (66461) | 66461..67117 | - | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| PTA69_RS24510 (67512) | 67512..68128 | + | 617 | Protein_89 | transposase | - |
| PTA69_RS24515 (68195) | 68195..68899 | + | 705 | WP_086525284.1 | IS6 family transposase IS26 | Transposase |
| PTA69_RS24520 (68845) | 68845..69957 | - | 1113 | WP_024166810.1 | IS91 family transposase ISAzo26 | Transposase |
| PTA69_RS24525 (70113) | 70113..70586 | + | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
| PTA69_RS24530 (70833) | 70833..71180 | + | 348 | Protein_93 | IS6 family transposase IS15DII | Transposase |
| PTA69_RS24535 (71328) | 71328..72188 | - | 861 | WP_015058868.1 | Beta-lactamase TEM | ARG |
| PTA69_RS24540 (72371) | 72371..72928 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| PTA69_RS24545 (73092) | 73092..73298 | + | 207 | Protein_96 | Tn3 family transposase TnpA_Tn3 | Transposase |
| PTA69_RS24550 (73366) | 73366..74070 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PTA69_RS24555 (74163) | 74163..75890 | + | 1728 | Protein_98 | Tn3 family transposase TnpA_Tn3 | Transposase |
| PTA69_RS24560 (75924) | 75924..76640 | + | 717 | Protein_99 | Tn3 family transposase | - |
| PTA69_RS24565 (76698) | 76698..76940 | + | 243 | WP_000844627.1 | transposase | - |
| PTA69_RS24570 (76972) | 76972..77622 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| PTA69_RS24575 (77728) | 77728..78927 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| PTA69_RS24580 (78959) | 78959..79842 | - | 884 | Protein_103 | EamA family transporter | - |
| PTA69_RS24585 (79980) | 79980..80372 | - | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| PTA69_RS24590 (80376) | 80376..82127 | + | 1752 | Protein_105 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| PTA69_RS24595 (82237) | 82237..82515 | + | 279 | WP_097309154.1 | type II toxin-antitoxin system toxin YacB | - |
| PTA69_RS24600 (82561) | 82561..83409 | + | 849 | WP_023154360.1 | 3'-5' exonuclease | - |
| PTA69_RS24605 (83526) | 83526..84008 | + | 483 | WP_001311056.1 | hypothetical protein | - |
| PTA69_RS24610 (84310) | 84310..84657 | + | 348 | WP_000142450.1 | DUF6404 family protein | - |
| PTA69_RS24615 (84675) | 84675..84860 | - | 186 | Protein_110 | hypothetical protein | - |
| PTA69_RS24620 (85086) | 85086..88901 | + | 3816 | WP_223364258.1 | hypothetical protein | - |
| PTA69_RS24625 (89433) | 89433..89783 | + | 351 | WP_000493379.1 | hypothetical protein | - |
| PTA69_RS24630 (89827) | 89827..90516 | + | 690 | WP_000796228.1 | hypothetical protein | - |
| PTA69_RS24635 (90513) | 90513..91304 | + | 792 | WP_000016493.1 | site-specific integrase | - |
| PTA69_RS24640 (91482) | 91482..91835 | + | 354 | WP_000864812.1 | colicin M immunity protein | - |
| PTA69_RS24645 (91885) | 91885..92700 | - | 816 | WP_001312845.1 | lipid II-degrading bacteriocin colicin M | - |
| PTA69_RS24650 (92944) | 92944..93471 | + | 528 | WP_000203272.1 | colicin B immunity protein | - |
| PTA69_RS24655 (93489) | 93489..93656 | - | 168 | Protein_118 | colicin-B | - |
| PTA69_RS24660 (93829) | 93829..94032 | + | 204 | Protein_119 | hypothetical protein | - |
| PTA69_RS24665 (94574) | 94574..94810 | + | 237 | WP_014640552.1 | colicin V immunity protein | - |
| PTA69_RS24670 (94788) | 94788..94985 | + | 198 | Protein_121 | colicin V | - |
| PTA69_RS24680 (95934) | 95934..98111 | + | 2178 | WP_001222186.1 | Ferric enterobactin receptor | VF |
| PTA69_RS24685 (98156) | 98156..99112 | - | 957 | WP_064055648.1 | hypothetical protein | VF |
| PTA69_RS24690 (99197) | 99197..100426 | - | 1230 | WP_000933675.1 | Enterochelin esterase | VF |
| PTA69_RS24695 (100530) | 100530..104189 | - | 3660 | WP_001111199.1 | Multidrug efflux ATP-binding/permease protein | VF |
| PTA69_RS24700 (104329) | 104329..105444 | - | 1116 | WP_001318220.1 | Elloramycin glycosyltransferase ElmGT | VF |
| PTA69_RS24705 (106755) | 106755..107780 | - | 1026 | Protein_128 | integrase core domain-containing protein | - |
| PTA69_RS24710 (108334) | 108334..108533 | + | 200 | Protein_129 | lysis protein | - |
| PTA69_RS24715 (108591) | 108591..108884 | - | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
| PTA69_RS24720 (109511) | 109511..110747 | + | 1237 | Protein_131 | IS3 family transposase IS2 | Transposase |
| PTA69_RS24725 (111970) | 111970..113163 | + | 1194 | WP_000450494.1 | GTP-binding protein | - |
| PTA69_RS24730 (113341) | 113341..113490 | + | 150 | Protein_133 | IS3 family transposase IS2 | Transposase |
| PTA69_RS24735 (113800) | 113800..115189 | + | 1390 | Protein_134 | ISNCY family transposase ISKpn21 | Transposase |
| PTA69_RS24740 (115424) | 115424..116365 | + | 942 | WP_000974762.1 | hypothetical protein | - |
| PTA69_RS24745 (116494) | 116494..116688 | - | 195 | Protein_136 | IS200/IS605-like element IS200C family transposase | - |
| PTA69_RS24750 (117162) | 117162..118532 | - | 1371 | WP_001312828.1 | efflux transporter outer membrane subunit | - |
| PTA69_RS24755 (118536) | 118536..120476 | - | 1941 | WP_000733250.1 | Macrolide export ATP-binding/permease protein MacB | VF |
| PTA69_RS24760 (120473) | 120473..121660 | - | 1188 | WP_000928804.1 | efflux RND transporter periplasmic adaptor subunit | - |
| PTA69_RS24765 (122255) | 122255..122595 | - | 341 | Protein_140 | IS3 family transposase | - |
| PTA69_RS24770 (122641) | 122641..122966 | + | 326 | Protein_141 | IS3 family transposase IS911 | Transposase |
| PTA69_RS24775 (123114) | 123114..124313 | - | 1200 | Protein_142 | IS3 family transposase IS629 | Transposase |
| PTA69_RS24780 (124452) | 124452..124631 | + | 180 | Protein_143 | integrase core domain-containing protein | - |
| PTA69_RS24785 (125929) | 125929..126882 | + | 954 | WP_000280980.1 | Protease 7 | VF |
| PTA69_RS24790 (127315) | 127315..128424 | + | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| PTA69_RS24795 (128493) | 128493..129395 | + | 903 | WP_001312822.1 | hypothetical protein | VF |
| PTA69_RS24800 (129769) | 129769..129957 | + | 189 | WP_001324033.1 | hypothetical protein | - |
| PTA69_RS24805 (130078) | 130078..130818 | + | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
| PTA69_RS24810 (131103) | 131103..132080 | - | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| PTA69_RS24815 (132826) | 132826..133149 | + | 324 | Protein_150 | IS21 family transposase IS21 | Transposase |
| PTA69_RS24820 (133151) | 133151..133255 | + | 105 | Protein_151 | AAA family ATPase | - |
| PTA69_RS24825 (133316) | 133316..133829 | + | 514 | Protein_152 | DUF4113 domain-containing protein | - |
| PTA69_RS24835 (135062) | 135062..135976 | + | 915 | WP_000949004.1 | putative periplasmic iron-binding protein | VF |
| PTA69_RS24840 (135976) | 135976..136803 | + | 828 | WP_000983710.1 | Manganese transport system ATP-binding protein MntB | VF |
| PTA69_RS24845 (136800) | 136800..137657 | + | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
| PTA69_RS24850 (137654) | 137654..138511 | + | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| PTA69_RS24855 (138745) | 138745..139002 | - | 258 | Protein_158 | Tn3 family transposase | - |
| PTA69_RS24860 (139000) | 139000..139414 | + | 415 | Protein_159 | phosphopyruvate hydratase | - |
| PTA69_RS24865 (139755) | 139755..140135 | + | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| PTA69_RS24870 (140515) | 140515..141708 | - | 1194 | WP_000095526.1 | MFS transporter | - |
| PTA69_RS24875 (141844) | 141844..143568 | + | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| PTA69_RS24880 (143569) | 143569..144516 | + | 948 | WP_000011910.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| PTA69_RS24885 (144516) | 144516..146258 | + | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| PTA69_RS24890 (146255) | 146255..147588 | + | 1334 | Protein_165 | L-lysine N6-monooxygenase | VF |
| PTA69_RS24895 (147614) | 147614..149815 | + | 2202 | WP_000973520.1 | Ferric aerobactin receptor | VF |
| PTA69_RS24900 (150300) | 150300..150997 | + | 698 | WP_094096600.1 | IS1 family transposase IS1S | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|