MGE detailed information
MGE type: Prophage MGE length: 43749 bp
Accession: NZ_CP117668 Location: 565395..609143 Organism: Escherichia albertii strain BIA_11 Replicon: chromosome
Accession: NZ_CP117668 Location: 565395..609143 Organism: Escherichia albertii strain BIA_11 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PS054_RS02990 () | 561409..561456 | + | 48 | WP_212741658.1 | hypothetical protein | - |
| PS054_RS02995 () | 561470..562453 | + | 984 | WP_000387364.1 | zinc transporter ZntB | - |
| PS054_RS03000 () | 562728..562901 | + | 174 | WP_032275239.1 | protein YnaL | - |
| PS054_RS03005 () | 562931..564304 | + | 1374 | WP_059268187.1 | ATP-dependent RNA helicase DbpA | - |
| PS054_RS03010 () | 564408..565343 | - | 936 | WP_044712357.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| PS054_RS03015 () | 565395..566630 | - | 1236 | WP_059221776.1 | Putative defective protein IntQ ; Integrase | Integrase |
| PS054_RS03020 () | 566632..566847 | - | 216 | WP_048969784.1 | excisionase XisR | - |
| PS054_RS03025 () | 566947..567135 | - | 189 | WP_273814796.1 | DUF1187 family protein | - |
| - () | 566952..567129 | + | 178 | NuclAT_0 | - | Antitoxin Detail |
| - () | 566952..567129 | + | 178 | NuclAT_0 | - | Antitoxin Detail |
| - () | 566952..567129 | + | 178 | NuclAT_0 | - | Antitoxin Detail |
| - () | 566952..567129 | + | 178 | NuclAT_0 | - | Antitoxin Detail |
| PS054_RS03030 () | 567128..567322 | - | 195 | WP_273814798.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| PS054_RS03035 () | 567387..568439 | - | 1053 | WP_273814800.1 | RecT family recombinase | - |
| PS054_RS03040 () | 568451..571612 | - | 3162 | WP_273814803.1 | exodeoxyribonuclease VIII | - |
| PS054_RS03045 () | 571713..571987 | - | 275 | Protein_602 | hypothetical protein | - |
| PS054_RS03050 () | 572062..572232 | - | 171 | WP_273814805.1 | YdaE family protein | - |
| PS054_RS03055 () | 572232..572453 | - | 222 | WP_059221772.1 | cell division protein FtsZ | - |
| PS054_RS03060 () | 572893..573383 | + | 491 | Protein_605 | superinfection exclusion B family protein | - |
| PS054_RS03065 () | 573380..573535 | - | 156 | WP_059224273.1 | DUF1391 family protein | - |
| PS054_RS03070 () | 573547..573681 | - | 135 | WP_000233814.1 | hypothetical protein | - |
| PS054_RS03075 () | 573931..574392 | - | 462 | WP_000753628.1 | helix-turn-helix domain-containing protein | - |
| PS054_RS03080 () | 574501..574776 | + | 276 | WP_059259890.1 | YdaS family helix-turn-helix protein | - |
| PS054_RS03085 () | 574760..575182 | + | 423 | WP_059259889.1 | toxin YdaT family protein | - |
| PS054_RS03090 () | 575260..576042 | + | 783 | WP_119047832.1 | hypothetical protein | - |
| PS054_RS03095 () | 576049..576795 | + | 747 | WP_113649859.1 | ATP-binding protein | - |
| PS054_RS03100 () | 576818..577579 | + | 762 | WP_273814812.1 | DUF1627 domain-containing protein | - |
| PS054_RS03105 () | 577587..578003 | + | 417 | WP_273814813.1 | DUF977 family protein | - |
| PS054_RS03110 () | 578000..578254 | + | 255 | WP_273814815.1 | hypothetical protein | - |
| PS054_RS03115 () | 578247..578558 | + | 312 | WP_273814816.1 | hypothetical protein | - |
| PS054_RS03120 () | 578692..579246 | - | 555 | WP_024229929.1 | hypothetical protein | - |
| PS054_RS03125 () | 579243..580175 | - | 933 | WP_273814817.1 | hypothetical protein | - |
| - | 580532..580590 | - | 59 | - | - | Antitoxin Detail |
| PS054_RS03130 () | 580602..580757 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| PS054_RS03135 () | 581010..581087 | + | 78 | Protein_620 | hypothetical protein | - |
| PS054_RS03140 () | 581243..581842 | + | 600 | WP_273814820.1 | DUF1367 family protein | - |
| PS054_RS03145 () | 581842..582132 | + | 291 | WP_000228020.1 | DUF1364 domain-containing protein | - |
| PS054_RS03150 () | 582129..582671 | + | 543 | WP_048969771.1 | DUF1133 family protein | - |
| PS054_RS03155 () | 583169..583504 | + | 336 | WP_273814822.1 | phage holin, lambda family | - |
| PS054_RS03160 () | 583508..583984 | + | 477 | WP_001194114.1 | glycoside hydrolase family protein | - |
| PS054_RS03165 () | 583968..584360 | + | 393 | WP_059214839.1 | DUF2570 domain-containing protein | - |
| PS054_RS03170 () | 584245..584523 | + | 279 | WP_233991579.1 | hypothetical protein | - |
| PS054_RS03175 () | 584568..584690 | + | 123 | WP_262410196.1 | hypothetical protein | - |
| PS054_RS03180 () | 584809..585066 | + | 258 | Protein_629 | ParB/Srx family N-terminal domain-containing protein | - |
| PS054_RS03185 () | 585590..586522 | + | 933 | WP_048969767.1 | hypothetical protein | - |
| PS054_RS03190 () | 586500..586709 | + | 210 | WP_048969766.1 | hypothetical protein | - |
| PS054_RS03195 () | 586713..587807 | + | 1095 | WP_273814825.1 | terminase small subunit | - |
| PS054_RS03200 () | 588880..590097 | + | 1218 | Protein_633 | terminase family protein | - |
| PS054_RS03205 () | 590100..591506 | + | 1407 | WP_059224260.1 | DUF4055 domain-containing protein | - |
| PS054_RS03210 () | 591490..592602 | + | 1113 | WP_273815559.1 | phage minor head protein | - |
| PS054_RS03215 () | 592707..593471 | + | 765 | WP_273814827.1 | hypothetical protein | - |
| PS054_RS03220 () | 593571..594710 | + | 1140 | WP_024229403.1 | P22 phage major capsid protein family protein | - |
| PS054_RS03225 () | 594752..594976 | + | 225 | WP_233991584.1 | hypothetical protein | - |
| PS054_RS03230 () | 594980..595372 | + | 393 | WP_273814830.1 | protein singed | - |
| PS054_RS03235 () | 595375..595758 | + | 384 | WP_024229406.1 | hypothetical protein | - |
| PS054_RS03240 () | 595759..596139 | + | 381 | WP_024229408.1 | hypothetical protein | - |
| PS054_RS03245 () | 596136..596528 | + | 393 | WP_024229409.1 | phage tail terminator-like protein | - |
| PS054_RS03250 () | 596555..597517 | + | 963 | WP_273814831.1 | phage tail tube protein | - |
| PS054_RS03255 () | 597668..598024 | + | 357 | Protein_644 | hypothetical protein | - |
| PS054_RS03260 () | 598500..600734 | + | 2235 | WP_273814833.1 | phage tail length tape measure family protein | - |
| PS054_RS03265 () | 600773..601708 | + | 936 | WP_273814835.1 | phage tail tape measure protein | - |
| PS054_RS03270 () | 601737..602033 | + | 297 | WP_024229414.1 | phage tail protein | - |
| PS054_RS03275 () | 602033..602731 | + | 699 | WP_273814837.1 | phage minor tail protein L | - |
| PS054_RS03280 () | 602736..603479 | + | 744 | WP_273814335.1 | C40 family peptidase | - |
| PS054_RS03285 () | 603476..604024 | + | 549 | WP_273814696.1 | tail assembly protein | - |
| PS054_RS03290 () | 604085..607498 | + | 3414 | WP_273815561.1 | host specificity protein J | - |
| PS054_RS03295 () | 607559..608872 | + | 1314 | WP_273814839.1 | ISNCY family transposase KIS | Transposase |
| PS054_RS03300 () | 608874..609143 | + | 270 | WP_095575662.1 | phage tail fiber C-terminal domain-containing protein | - |
| PS054_RS03305 () | 609249..610130 | + | 882 | WP_059269168.1 | type III secretion system effector kinase NleH | - |
| PS054_RS03310 () | 610223..610342 | + | 120 | Protein_655 | IS256 family transposase | - |
| PS054_RS03315 () | 610464..610742 | - | 279 | WP_059217652.1 | hypothetical protein | - |
| PS054_RS03320 () | 611151..611777 | + | 627 | WP_113650741.1 | T3SS effector NleG family protein | - |
| PS054_RS03325 () | 612004..613488 | - | 1485 | WP_059221916.1 | alpha/beta hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|