MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 71004 bp
Accession: NZ_CP117640 Location: 1..71004 Organism: Escherichia albertii strain BIA_18 Replicon: plasmid pEA18_3
Accession: NZ_CP117640 Location: 1..71004 Organism: Escherichia albertii strain BIA_18 Replicon: plasmid pEA18_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PS040_RS25330 (46) | 46..1077 | + | 1032 | WP_273784125.1 | plasmid replication initiator RepA | - |
| PS040_RS25335 (1783) | 1783..1941 | + | 159 | WP_165387335.1 | hypothetical protein | - |
| PS040_RS25340 (1996) | 1996..2265 | + | 270 | WP_000079941.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| PS040_RS25345 (2265) | 2265..2543 | + | 279 | WP_273784138.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| PS040_RS25350 (2852) | 2852..3994 | + | 1143 | WP_158649904.1 | YiiX/YebB-like N1pC/P60 family cysteine hydrolase | - |
| PS040_RS25355 (3967) | 3967..4071 | + | 105 | Protein_5 | hypothetical protein | - |
| PS040_RS25360 (4083) | 4083..4994 | + | 912 | WP_024244186.1 | hypothetical protein | VF |
| PS040_RS25365 (5136) | 5136..5531 | - | 396 | WP_000445930.1 | plasmid partitioning/stability family protein | - |
| PS040_RS25370 (5531) | 5531..6490 | - | 960 | WP_000921958.1 | plasmid segregation protein ParM | - |
| PS040_RS25375 (6929) | 6929..7831 | + | 903 | WP_273784135.1 | DUF1281 domain-containing protein | - |
| PS040_RS25380 (7828) | 7828..8070 | + | 243 | WP_001503439.1 | hypothetical protein | - |
| PS040_RS25385 (8168) | 8168..9184 | + | 1017 | WP_000219394.1 | IS110 family transposase ISShdy1 | Transposase |
| PS040_RS25390 (9731) | 9731..9805 | + | 75 | Protein_12 | hypothetical protein | - |
| PS040_RS25395 (9860) | 9860..9931 | + | 72 | Protein_13 | adenine-specific DNA-methyltransferase | - |
| PS040_RS25400 (10013) | 10013..11713 | - | 1701 | WP_273784126.1 | group II intron reverse transcriptase/maturase | - |
| PS040_RS25405 (12335) | 12335..12946 | + | 612 | Protein_15 | DNA methylase | - |
| PS040_RS25410 (12947) | 12947..13168 | + | 222 | WP_059328770.1 | hypothetical protein | - |
| PS040_RS25415 (13062) | 13062..13614 | + | 553 | Protein_17 | DUF1380 family protein | - |
| PS040_RS25420 (13660) | 13660..14436 | + | 777 | WP_273784127.1 | hypothetical protein | - |
| PS040_RS25425 (14850) | 14850..15275 | + | 426 | WP_062859984.1 | antirestriction protein | - |
| PS040_RS25430 (15322) | 15322..15744 | + | 423 | WP_273784070.1 | hypothetical protein | - |
| PS040_RS25435 (15741) | 15741..15932 | + | 192 | WP_023278050.1 | hypothetical protein | - |
| PS040_RS25440 (16909) | 16909..17139 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| PS040_RS25445 (17191) | 17191..18552 | + | 1362 | WP_089697241.1 | DUF3560 domain-containing protein | - |
| PS040_RS25450 (18599) | 18599..19162 | + | 564 | WP_273784071.1 | class I SAM-dependent methyltransferase | - |
| PS040_RS25455 (19248) | 19248..19691 | - | 444 | Protein_25 | hypothetical protein | - |
| PS040_RS25460 (19761) | 19761..20021 | + | 261 | WP_244463895.1 | single-stranded DNA-binding protein | - |
| PS040_RS25465 (20114) | 20114..21106 | - | 993 | WP_273784074.1 | IS110 family transposase IS1663 | Transposase |
| PS040_RS25470 (21197) | 21197..21616 | + | 420 | Protein_28 | single-stranded DNA-binding protein | - |
| PS040_RS25475 (21673) | 21673..21906 | + | 234 | WP_000006009.1 | DUF905 family protein | - |
| PS040_RS25480 (21972) | 21972..23928 | + | 1957 | Protein_30 | ParB/RepB/Spo0J family partition protein | - |
| PS040_RS25485 (23997) | 23997..24431 | + | 435 | WP_273784012.1 | conjugation system SOS inhibitor PsiB | - |
| PS040_RS25490 (24428) | 24428..25147 | + | 720 | WP_273784128.1 | plasmid SOS inhibition protein A | - |
| PS040_RS25495 (25147) | 25147..25665 | + | 519 | WP_273784129.1 | hypothetical protein | - |
| - (25735) | 25735..25800 | + | 66 | NuclAT_1 | - | Antitoxin Detail |
| - (25641) | 25641..25802 | + | 162 | NuclAT_0 | - | Antitoxin Detail |
| - (25641) | 25641..25802 | + | 162 | NuclAT_0 | - | Antitoxin Detail |
| - (25641) | 25641..25802 | + | 162 | NuclAT_0 | - | Antitoxin Detail |
| - (25641) | 25641..25802 | + | 162 | NuclAT_0 | - | Antitoxin Detail |
| - (25641) | 25641..25802 | - | 162 | NuclAT_0 | - | Antitoxin Detail |
| PS040_RS25500 (25788) | 25788..25937 | + | 150 | Protein_34 | plasmid maintenance protein Mok | - |
| PS040_RS25505 (25879) | 25879..26004 | + | 126 | WP_096937776.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| PS040_RS25510 (26298) | 26298..26948 | + | 651 | WP_273784130.1 | IS66 family transposase IS679 | Transposase |
| PS040_RS25515 (26948) | 26948..27286 | + | 339 | WP_273784131.1 | IS66 family transposase ISCro1 | Transposase |
| PS040_RS25520 (27338) | 27338..28396 | + | 1059 | WP_273784132.1 | IS481 family transposase ISKpn28 | Transposase |
| PS040_RS25525 (28416) | 28416..29985 | + | 1570 | Protein_39 | IS66 family transposase | - |
| PS040_RS25530 (30016) | 30016..30416 | - | 401 | Protein_40 | IS3 family transposase ISEc48 | Transposase |
| PS040_RS25535 (30593) | 30593..31348 | - | 756 | WP_001282649.1 | IS21 family transposase ISSso4 | Transposase |
| PS040_RS25540 (31365) | 31365..32900 | - | 1536 | WP_256878094.1 | IS21 family transposase ISSso4 | Transposase |
| PS040_RS25545 (33131) | 33131..33483 | - | 353 | Protein_43 | IS1 family transposase IS1N | Transposase |
| PS040_RS25550 (33643) | 33643..34466 | + | 824 | Protein_44 | helix-turn-helix transcriptional regulator | - |
| PS040_RS25555 (34513) | 34513..34920 | + | 408 | WP_273784133.1 | protein PerB | - |
| PS040_RS25560 (34950) | 34950..35219 | + | 270 | WP_273784134.1 | PerC family transcriptional regulator | - |
| PS040_RS25565 (35263) | 35263..35403 | + | 141 | WP_273784139.1 | hypothetical protein | - |
| PS040_RS25570 (35342) | 35342..36295 | + | 954 | Protein_48 | IS630 family transposase | - |
| PS040_RS25575 (36482) | 36482..37057 | - | 576 | WP_273784104.1 | Major structural subunit of bundle-forming pilus | VF |
| PS040_RS25580 (37324) | 37324..37916 | - | 593 | Protein_50 | DDE-type integrase/transposase/recombinase | - |
| PS040_RS25585 (37948) | 37948..39540 | - | 1593 | WP_273784105.1 | IS66 family transposase ISEc47 | Transposase |
| PS040_RS25590 (39571) | 39571..39921 | - | 351 | WP_000624718.1 | IS66 family transposase ISEc47 | Transposase |
| PS040_RS25595 (39918) | 39918..40343 | - | 426 | WP_000422702.1 | IS66 family transposase ISEc23 | Transposase |
| PS040_RS25600 (40479) | 40479..41707 | + | 1229 | WP_273784106.1 | IS3 family transposase IS2 | Transposase |
| PS040_RS25605 (41762) | 41762..42100 | + | 339 | WP_273784107.1 | hypothetical protein | - |
| PS040_RS25610 (42274) | 42274..42387 | + | 114 | WP_252399424.1 | lasso peptide biosynthesis B2 protein | - |
| PS040_RS25615 (42390) | 42390..43820 | + | 1431 | Protein_57 | lasso peptide isopeptide bond-forming cyclase | - |
| PS040_RS25620 (43823) | 43823..45565 | + | 1743 | WP_273784108.1 | ATP-binding cassette domain-containing protein | - |
| PS040_RS25625 (45890) | 45890..46138 | - | 249 | Protein_59 | resolvase | - |
| PS040_RS25630 (46224) | 46224..47246 | + | 1023 | WP_000255956.1 | IS21 family transposase IS100kyp | Transposase |
| PS040_RS25635 (47243) | 47243..48024 | + | 782 | Protein_61 | IS21 family transposase IS100kyp | Transposase |
| PS040_RS25640 (48086) | 48086..48493 | - | 408 | Protein_62 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| PS040_RS25645 (48788) | 48788..49408 | + | 621 | WP_000864791.1 | ParA family protein | - |
| PS040_RS25650 (49460) | 49460..49690 | + | 231 | WP_000051063.1 | plasmid partition protein ParG | - |
| PS040_RS25655 (49706) | 49706..50017 | + | 312 | WP_001423339.1 | hypothetical protein | - |
| PS040_RS25660 (50151) | 50151..50252 | - | 102 | Protein_66 | IS3 family transposase | - |
| PS040_RS25665 (50318) | 50318..51850 | + | 1533 | WP_273782136.1 | IS3 family transposase ISKpn38 | Transposase |
| PS040_RS25670 (51911) | 51911..52333 | + | 423 | Protein_68 | IS91 family transposase ISEc37 | Transposase |
| PS040_RS25675 (52744) | 52744..52899 | + | 156 | Protein_69 | transposase domain-containing protein | - |
| PS040_RS25680 (52955) | 52955..53038 | - | 84 | Protein_70 | IS66 family transposase IS682 | Transposase |
| PS040_RS25685 (53035) | 53035..53397 | - | 363 | WP_273784109.1 | IS66 family transposase ISEc23 | Transposase |
| PS040_RS25690 (53577) | 53577..54026 | - | 450 | WP_096951476.1 | hypothetical protein | VF |
| PS040_RS25695 (54029) | 54029..54517 | - | 489 | WP_273784136.1 | hypothetical protein | VF |
| PS040_RS25700 (54507) | 54507..55058 | - | 552 | WP_273784110.1 | hypothetical protein | VF |
| PS040_RS25705 (55055) | 55055..55600 | - | 546 | WP_273784111.1 | hypothetical protein | VF |
| PS040_RS25710 (55621) | 55621..56067 | - | 447 | WP_273784112.1 | hypothetical protein | VF |
| PS040_RS25715 (56049) | 56049..56798 | - | 750 | WP_273784113.1 | Leader peptidase PppA | VF |
| PS040_RS25720 (56805) | 56805..57761 | - | 957 | WP_273784114.1 | Twitching mobility protein | VF |
| PS040_RS25725 (57782) | 57782..58840 | - | 1059 | WP_273784115.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| PS040_RS25730 (58847) | 58847..60454 | - | 1608 | WP_273784116.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| PS040_RS25735 (60461) | 60461..60955 | - | 495 | WP_273784117.1 | hypothetical protein | VF |
| PS040_RS25740 (60933) | 60933..62141 | - | 1209 | WP_273784118.1 | hypothetical protein | VF |
| PS040_RS25745 (62138) | 62138..63796 | - | 1659 | WP_273784119.1 | Outer membrane lipoprotein BfpB | VF |
| PS040_RS25750 (63803) | 63803..64204 | - | 402 | WP_273784120.1 | hypothetical protein | VF |
| PS040_RS25755 (64251) | 64251..64838 | - | 588 | WP_273784121.1 | Major structural subunit of bundle-forming pilus | VF |
| PS040_RS25760 (65029) | 65029..65163 | + | 135 | WP_273784137.1 | transcriptional regulator | - |
| PS040_RS25770 (66752) | 66752..67018 | - | 267 | WP_089583658.1 | hypothetical protein | - |
| PS040_RS25775 (67022) | 67022..67282 | - | 261 | WP_000994493.1 | hypothetical protein | - |
| PS040_RS25780 (67279) | 67279..67533 | - | 255 | WP_273784122.1 | PilI type IV pilus biogenesis protein | - |
| PS040_RS25785 (67705) | 67705..68388 | - | 684 | WP_273784123.1 | conjugal transfer protein TraC | - |
| PS040_RS25790 (68642) | 68642..69175 | - | 534 | Protein_92 | transcription termination/antitermination NusG family protein | - |
| PS040_RS25795 (69617) | 69617..69904 | - | 288 | WP_273784124.1 | conjugal transfer protein TraA | - |
| PS040_RS25800 (69942) | 69942..70100 | - | 159 | Protein_94 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|