MGE detailed information
MGE type: Prophage MGE length: 43406 bp
Accession: NZ_CP117620 Location: 2062869..2106274 Organism: Escherichia albertii strain BIA_24 Replicon: chromosome
Accession: NZ_CP117620 Location: 2062869..2106274 Organism: Escherichia albertii strain BIA_24 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PS039_RS09865 () | 2058884..2058931 | + | 48 | WP_212741658.1 | hypothetical protein | - |
| PS039_RS09870 () | 2058945..2059928 | + | 984 | WP_000387364.1 | zinc transporter ZntB | - |
| PS039_RS09875 () | 2060203..2060376 | + | 174 | WP_032275239.1 | protein YnaL | - |
| PS039_RS09880 () | 2060406..2061779 | + | 1374 | WP_000123704.1 | ATP-dependent RNA helicase DbpA | - |
| PS039_RS09885 () | 2061882..2062817 | - | 936 | WP_044712357.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| PS039_RS09890 () | 2062869..2064104 | - | 1236 | WP_072249326.1 | Putative defective protein IntQ ; Integrase | Integrase |
| PS039_RS09895 () | 2064106..2064321 | - | 216 | WP_048969784.1 | excisionase XisR | - |
| PS039_RS09900 () | 2064420..2064608 | - | 189 | WP_059278634.1 | DUF1187 family protein | - |
| - () | 2064425..2064602 | + | 178 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2064425..2064602 | + | 178 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2064425..2064602 | + | 178 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2064425..2064602 | + | 178 | NuclAT_0 | - | Antitoxin Detail |
| PS039_RS09905 () | 2064601..2064795 | - | 195 | WP_059278633.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| PS039_RS09910 () | 2064860..2065954 | - | 1095 | WP_273810513.1 | RecT family recombinase | - |
| PS039_RS09915 () | 2065969..2069094 | - | 3126 | WP_059278632.1 | exodeoxyribonuclease VIII | - |
| PS039_RS09920 () | 2069194..2069469 | - | 276 | WP_059278631.1 | hypothetical protein | - |
| PS039_RS09925 () | 2069544..2069714 | - | 171 | WP_076741965.1 | YdaE family protein | - |
| PS039_RS09930 () | 2069714..2069935 | - | 222 | WP_048969779.1 | cell division protein FtsZ | - |
| PS039_RS09935 () | 2070376..2070864 | + | 489 | WP_001312793.1 | superinfection exclusion B family protein | - |
| PS039_RS09940 () | 2070861..2071016 | - | 156 | WP_001169146.1 | DUF1391 family protein | - |
| PS039_RS09945 () | 2071027..2071161 | - | 135 | WP_000233807.1 | hypothetical protein | - |
| PS039_RS09950 () | 2071468..2071857 | - | 390 | WP_033544642.1 | helix-turn-helix domain-containing protein | - |
| PS039_RS09955 () | 2071955..2072197 | + | 243 | WP_001033914.1 | helix-turn-helix transcriptional regulator | - |
| PS039_RS09960 () | 2072194..2072616 | + | 423 | WP_059278629.1 | toxin YdaT family protein | - |
| PS039_RS09965 () | 2072694..2073482 | + | 789 | WP_059279425.1 | hypothetical protein | - |
| PS039_RS09970 () | 2073489..2074235 | + | 747 | WP_048969775.1 | ATP-binding protein | - |
| PS039_RS09975 () | 2074258..2075019 | + | 762 | WP_273810514.1 | DUF1627 domain-containing protein | - |
| PS039_RS09980 () | 2075027..2075443 | + | 417 | WP_273810515.1 | DUF977 family protein | - |
| PS039_RS09985 () | 2075440..2075704 | + | 265 | Protein_1935 | hypothetical protein | - |
| PS039_RS09990 () | 2075700..2076002 | + | 303 | WP_273810571.1 | hypothetical protein | - |
| PS039_RS09995 () | 2076133..2076561 | + | 429 | WP_233991577.1 | hypothetical protein | - |
| PS039_RS10000 () | 2076563..2077114 | + | 552 | WP_233991578.1 | DUF551 domain-containing protein | - |
| - | 2077591..2077649 | - | 59 | - | - | Antitoxin Detail |
| PS039_RS10005 () | 2077661..2077816 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| PS039_RS10010 () | 2078092..2078304 | + | 213 | WP_072248386.1 | hypothetical protein | - |
| PS039_RS10015 () | 2078376..2078975 | + | 600 | WP_059214836.1 | DUF1367 family protein | - |
| PS039_RS10020 () | 2078975..2079264 | + | 290 | Protein_1942 | DUF1364 domain-containing protein | - |
| PS039_RS10025 () | 2079261..2079803 | + | 543 | WP_059214837.1 | DUF1133 family protein | - |
| PS039_RS10030 () | 2080301..2080636 | + | 336 | WP_001766841.1 | phage holin, lambda family | - |
| PS039_RS10035 () | 2080640..2081116 | + | 477 | WP_047655280.1 | glycoside hydrolase family protein | - |
| PS039_RS10040 () | 2081100..2081480 | + | 381 | WP_059268182.1 | DUF2570 domain-containing protein | - |
| PS039_RS10045 () | 2081365..2081643 | + | 279 | WP_224543230.1 | hypothetical protein | - |
| PS039_RS10050 () | 2081927..2082184 | + | 258 | Protein_1948 | ParB/Srx family N-terminal domain-containing protein | - |
| PS039_RS10055 () | 2082708..2083640 | + | 933 | WP_048969767.1 | hypothetical protein | - |
| PS039_RS10060 () | 2083618..2083827 | + | 210 | WP_048969766.1 | hypothetical protein | - |
| PS039_RS10065 () | 2083831..2084937 | + | 1107 | WP_273810516.1 | terminase small subunit | - |
| PS039_RS10070 () | 2085027..2085878 | - | 852 | WP_273810517.1 | HNH endonuclease | - |
| PS039_RS10075 () | 2086010..2087227 | + | 1218 | Protein_1953 | terminase family protein | - |
| PS039_RS10080 () | 2087230..2088636 | + | 1407 | WP_273810518.1 | DUF4055 domain-containing protein | - |
| PS039_RS10085 () | 2088620..2089732 | + | 1113 | WP_273810572.1 | phage minor head protein | - |
| PS039_RS10090 () | 2089837..2090601 | + | 765 | WP_024229402.1 | hypothetical protein | - |
| PS039_RS10095 () | 2090701..2091840 | + | 1140 | WP_024229403.1 | P22 phage major capsid protein family protein | - |
| PS039_RS10100 () | 2091882..2092106 | + | 225 | WP_059214847.1 | hypothetical protein | - |
| PS039_RS10105 () | 2092110..2092505 | + | 396 | WP_059214848.1 | hypothetical protein | - |
| PS039_RS10110 () | 2092505..2092888 | + | 384 | WP_024229406.1 | hypothetical protein | - |
| PS039_RS10115 () | 2092889..2093269 | + | 381 | WP_024229408.1 | hypothetical protein | - |
| PS039_RS10120 () | 2093266..2093658 | + | 393 | WP_273810519.1 | phage tail terminator-like protein | - |
| PS039_RS10125 () | 2093685..2094647 | + | 963 | WP_024229411.1 | phage tail tube protein | - |
| PS039_RS10130 () | 2094798..2095154 | + | 357 | Protein_1964 | hypothetical protein | - |
| PS039_RS10135 () | 2095629..2098838 | + | 3210 | WP_273810520.1 | phage tail tape measure protein | - |
| PS039_RS10140 () | 2098867..2099163 | + | 297 | WP_024184658.1 | phage tail protein | - |
| PS039_RS10145 () | 2099163..2099861 | + | 699 | WP_273810521.1 | phage minor tail protein L | - |
| PS039_RS10150 () | 2099866..2100609 | + | 744 | WP_273810522.1 | C40 family peptidase | - |
| PS039_RS10155 () | 2100606..2101154 | + | 549 | WP_233929418.1 | tail assembly protein | - |
| PS039_RS10160 () | 2101215..2104628 | + | 3414 | WP_273810523.1 | host specificity protein J | - |
| PS039_RS10165 () | 2104690..2106003 | + | 1314 | WP_273810524.1 | ISNCY family transposase KIS | Transposase |
| PS039_RS10170 () | 2106005..2106274 | + | 270 | WP_001023428.1 | phage tail fiber C-terminal domain-containing protein | - |
| PS039_RS10175 () | 2106388..2107269 | + | 882 | WP_059217654.1 | type III secretion system effector kinase NleH | - |
| PS039_RS10180 () | 2107604..2107882 | - | 279 | WP_059217652.1 | hypothetical protein | - |
| PS039_RS10185 () | 2108297..2108857 | + | 561 | WP_059217651.1 | T3SS effector NleG family protein | - |
| PS039_RS10190 () | 2109417..2110625 | - | 1209 | WP_072244042.1 | secretion protein EspV | - |
| PS039_RS10195 () | 2110741..2111058 | - | 318 | WP_273810525.1 | YkgJ family cysteine cluster protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|