MGE detailed information
MGE type: Conjugative plasmid MGE length: 107716 bp
Accession: NZ_CP117611 Location: 1..107716 Organism: Escherichia albertii strain BIA_26 Replicon: plasmid pEA26_2
Accession: NZ_CP117611 Location: 1..107716 Organism: Escherichia albertii strain BIA_26 Replicon: plasmid pEA26_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PS038_RS22925 (1) | 1..978 | + | 978 | WP_273818334.1 | RepB family plasmid replication initiator protein | - |
| PS038_RS22930 (1144) | 1144..2338 | - | 1195 | Protein_1 | IS200-IS605 family transposase IS609 | Transposase |
| PS038_RS22935 (2346) | 2346..2774 | + | 429 | Protein_2 | IS200-IS605 family transposase IS609 | Transposase |
| PS038_RS22940 (2933) | 2933..3673 | - | 741 | WP_273818335.1 | tyrosine-type recombinase/integrase | - |
| PS038_RS22945 (3794) | 3794..3916 | - | 123 | Protein_4 | serine/threonine protein kinase | - |
| PS038_RS22950 (3954) | 3954..4709 | - | 756 | Protein_5 | IS256 family transposase IS1414 | Transposase |
| PS038_RS22955 (5399) | 5399..5971 | + | 573 | WP_273818014.1 | hypothetical protein | - |
| PS038_RS22960 (6569) | 6569..7789 | + | 1221 | WP_273818015.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| PS038_RS22965 (7789) | 7789..9906 | + | 2118 | WP_273818336.1 | peptidase domain-containing ABC transporter | - |
| PS038_RS22970 (10126) | 10126..11354 | + | 1229 | WP_273818337.1 | IS3 family transposase IS2 | Transposase |
| PS038_RS22975 (11494) | 11494..12056 | + | 563 | Protein_10 | IS256 family transposase IS1414 | Transposase |
| PS038_RS22980 (12139) | 12139..12316 | - | 178 | Protein_11 | transposase domain-containing protein | - |
| PS038_RS22985 (12476) | 12476..13334 | + | 859 | Protein_12 | IS3 family transposase IS911 | Transposase |
| PS038_RS22990 (13617) | 13617..14675 | + | 1059 | Protein_13 | IS110 family transposase ISEc21 | Transposase |
| PS038_RS22995 (14692) | 14692..15009 | + | 318 | Protein_14 | integrase core domain-containing protein | - |
| PS038_RS23000 (15144) | 15144..15791 | - | 648 | WP_273817126.1 | hypothetical protein | VF |
| PS038_RS23005 (16451) | 16451..16751 | - | 301 | Protein_16 | IS3 family transposase ISKpn38 | Transposase |
| PS038_RS23010 (17163) | 17163..17920 | + | 758 | Protein_17 | substrate-binding domain-containing protein | - |
| PS038_RS23015 (18397) | 18397..18822 | + | 426 | WP_273818333.1 | antirestriction protein | - |
| PS038_RS23020 (18869) | 18869..19342 | + | 474 | WP_273818332.1 | hypothetical protein | - |
| PS038_RS23025 (19287) | 19287..19478 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| PS038_RS23030 (19677) | 19677..19937 | - | 261 | Protein_21 | hypothetical protein | - |
| PS038_RS23035 (20454) | 20454..20684 | + | 231 | WP_137538578.1 | hypothetical protein | - |
| PS038_RS23040 (20736) | 20736..22097 | + | 1362 | WP_273818339.1 | DUF3560 domain-containing protein | - |
| PS038_RS23045 (22144) | 22144..22707 | + | 564 | WP_063501375.1 | class I SAM-dependent methyltransferase | - |
| PS038_RS23050 (22856) | 22856..23173 | + | 318 | WP_273818340.1 | hypothetical protein | - |
| PS038_RS23055 (23297) | 23297..23491 | + | 195 | WP_273818368.1 | hypothetical protein | - |
| PS038_RS23060 (23565) | 23565..23789 | - | 225 | WP_172905820.1 | hypothetical protein | - |
| PS038_RS23065 (23902) | 23902..24108 | + | 207 | WP_273818341.1 | single-stranded DNA-binding protein | - |
| PS038_RS23070 (24133) | 24133..24420 | + | 288 | WP_273818342.1 | hypothetical protein | - |
| PS038_RS23075 (24540) | 24540..25361 | + | 822 | WP_001234469.1 | DUF932 domain-containing protein | - |
| PS038_RS23080 (25658) | 25658..26260 | - | 603 | WP_000243709.1 | hypothetical protein | VF |
| PS038_RS23085 (26581) | 26581..26964 | + | 384 | WP_001151524.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| PS038_RS23090 (27151) | 27151..27840 | + | 690 | WP_273818343.1 | conjugal transfer transcriptional regulator TraJ | - |
| PS038_RS23095 (27933) | 27933..28334 | + | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| PS038_RS23100 (28367) | 28367..28732 | + | 366 | WP_273818344.1 | type IV conjugative transfer system pilin TraA | - |
| PS038_RS23105 (28747) | 28747..29058 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| PS038_RS23110 (29080) | 29080..29646 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| PS038_RS23115 (29633) | 29633..30361 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| PS038_RS23120 (30361) | 30361..31788 | + | 1428 | WP_000146657.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| PS038_RS23125 (31778) | 31778..32368 | + | 591 | WP_273818346.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| PS038_RS23130 (32355) | 32355..32675 | + | 321 | WP_273818347.1 | conjugal transfer protein TrbD | - |
| PS038_RS23135 (32672) | 32672..33187 | + | 516 | WP_273818348.1 | type IV conjugative transfer system lipoprotein TraV | - |
| PS038_RS23140 (33322) | 33322..33543 | + | 222 | WP_001278695.1 | conjugal transfer protein TraR | - |
| PS038_RS23145 (33536) | 33536..33949 | + | 414 | WP_000549581.1 | hypothetical protein | - |
| PS038_RS23150 (33942) | 33942..34415 | + | 474 | WP_273818349.1 | hypothetical protein | - |
| PS038_RS23155 (34495) | 34495..34710 | + | 216 | WP_273818350.1 | hypothetical protein | - |
| PS038_RS23160 (34711) | 34711..35034 | + | 324 | WP_273818351.1 | hypothetical protein | - |
| PS038_RS23165 (35326) | 35326..35688 | + | 363 | WP_273818352.1 | hypothetical protein | - |
| PS038_RS23170 (35814) | 35814..38444 | + | 2631 | WP_273818354.1 | type IV secretion system protein TraC | - |
| PS038_RS23175 (38441) | 38441..38827 | + | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| PS038_RS23180 (38824) | 38824..39456 | + | 633 | WP_273818355.1 | type-F conjugative transfer system protein TraW | - |
| PS038_RS23185 (39453) | 39453..40445 | + | 993 | WP_273818357.1 | conjugal transfer pilus assembly protein TraU | - |
| PS038_RS23190 (40474) | 40474..40785 | + | 312 | WP_273818359.1 | hypothetical protein | - |
| PS038_RS23195 (40794) | 40794..41432 | + | 639 | WP_273818360.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| PS038_RS23200 (41429) | 41429..41809 | + | 381 | WP_053287535.1 | hypothetical protein | - |
| PS038_RS23205 (42045) | 42045..42725 | + | 681 | Protein_56 | conjugal transfer protein TraN | - |
| PS038_RS23210 (42813) | 42813..43835 | + | 1023 | WP_000255944.1 | IS21 family transposase IS100kyp | Transposase |
| PS038_RS23215 (43832) | 43832..44614 | + | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| PS038_RS23220 (44742) | 44742..46361 | + | 1620 | WP_273818010.1 | ISL3 family transposase ISEc38 | Transposase |
| PS038_RS23225 (46514) | 46514..47638 | + | 1125 | Protein_60 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| PS038_RS23230 (47665) | 47665..47922 | + | 258 | WP_273818364.1 | conjugal transfer protein TrbE | - |
| PS038_RS23235 (47915) | 47915..48658 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| PS038_RS23240 (48674) | 48674..49021 | + | 348 | WP_273818361.1 | conjugal transfer protein TrbA | - |
| PS038_RS23245 (49140) | 49140..49424 | + | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| PS038_RS23250 (49411) | 49411..49956 | + | 546 | WP_263781396.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| PS038_RS23255 (49886) | 49886..50248 | + | 363 | WP_273818362.1 | P-type conjugative transfer protein TrbJ | - |
| PS038_RS23260 (50248) | 50248..51621 | + | 1374 | WP_273818365.1 | conjugal transfer pilus assembly protein TraH | - |
| PS038_RS23265 (51618) | 51618..54440 | + | 2823 | WP_273818363.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| PS038_RS23270 (54456) | 54456..54941 | + | 486 | WP_000605866.1 | hypothetical protein | - |
| PS038_RS23275 (54990) | 54990..55721 | + | 732 | WP_273818325.1 | conjugal transfer complement resistance protein TraT | - |
| PS038_RS23280 (55974) | 55974..58145 | + | 2172 | WP_156849463.1 | type IV conjugative transfer system coupling protein TraD | - |
| PS038_RS23285 (58145) | 58145..63415 | + | 5271 | WP_273818326.1 | Multifunctional conjugation protein TraI | Relaxase |
| PS038_RS23290 (63435) | 63435..64181 | + | 747 | WP_273810588.1 | conjugal transfer pilus acetylase TraX | - |
| PS038_RS23295 (64236) | 64236..64796 | + | 561 | WP_273818327.1 | fertility inhibition protein FinO | - |
| PS038_RS23300 (64933) | 64933..65146 | + | 214 | Protein_75 | hypothetical protein | - |
| - (65728) | 65728..65789 | - | 62 | NuclAT_1 | - | - |
| - (65728) | 65728..65789 | - | 62 | NuclAT_1 | - | - |
| - (65728) | 65728..65789 | - | 62 | NuclAT_1 | - | - |
| - (65728) | 65728..65789 | - | 62 | NuclAT_1 | - | - |
| PS038_RS23305 (65833) | 65833..65982 | + | 150 | WP_001312851.1 | Hok/Gef family protein | - |
| PS038_RS23310 (66266) | 66266..66523 | + | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| PS038_RS23315 (66744) | 66744..66818 | + | 75 | WP_273818366.1 | RepA leader peptide Tap | - |
| PS038_RS23320 (66811) | 66811..67668 | + | 858 | WP_273818328.1 | incFII family plasmid replication initiator RepA | - |
| PS038_RS23325 (68584) | 68584..68853 | + | 270 | WP_273818329.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| PS038_RS23330 (68853) | 68853..69131 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| PS038_RS23335 (69141) | 69141..69620 | - | 480 | Protein_82 | IS21 family transposase IS21 | Transposase |
| PS038_RS23340 (69620) | 69620..69994 | - | 375 | Protein_83 | IS21 family transposase IS21 | Transposase |
| PS038_RS23345 (70090) | 70090..71709 | + | 1620 | WP_273818010.1 | ISL3 family transposase ISEc38 | Transposase |
| PS038_RS23350 (71771) | 71771..72896 | - | 1126 | Protein_85 | IS3 family transposase IS2 | Transposase |
| PS038_RS23355 (73425) | 73425..77543 | + | 4119 | WP_273817112.1 | Hemoglobin-binding protease hbp autotransporter | VF |
| PS038_RS23360 (77729) | 77729..78113 | + | 385 | Protein_87 | transposase | - |
| PS038_RS23365 (78347) | 78347..78514 | - | 168 | WP_273817111.1 | AraC family transcriptional regulator | - |
| PS038_RS23370 (78831) | 78831..79586 | - | 756 | WP_001282649.1 | IS21 family transposase ISSso4 | Transposase |
| PS038_RS23375 (79603) | 79603..81138 | - | 1536 | WP_273818330.1 | IS21 family transposase ISSso4 | Transposase |
| PS038_RS23380 (81374) | 81374..82217 | + | 844 | Protein_91 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| PS038_RS23385 (82734) | 82734..83099 | + | 366 | Protein_92 | IS3 family transposase ISEc25 | Transposase |
| PS038_RS23390 (83150) | 83150..84769 | - | 1620 | WP_273818010.1 | ISL3 family transposase ISEc38 | Transposase |
| PS038_RS23395 (84984) | 84984..85220 | + | 237 | WP_273817113.1 | hypothetical protein | - |
| PS038_RS23400 (85449) | 85449..86585 | - | 1137 | Protein_95 | IS66 family transposase ISEc23 | Transposase |
| PS038_RS23405 (86672) | 86672..87694 | + | 1023 | WP_000255944.1 | IS21 family transposase IS100kyp | Transposase |
| PS038_RS23410 (87691) | 87691..88473 | + | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| PS038_RS23415 (88601) | 88601..90220 | + | 1620 | WP_273818010.1 | ISL3 family transposase ISEc38 | Transposase |
| PS038_RS23420 (90283) | 90283..90941 | - | 659 | Protein_99 | IS3 family transposase ISEc48 | Transposase |
| PS038_RS23425 (91391) | 91391..91486 | - | 96 | Protein_100 | ATP-binding protein | - |
| PS038_RS23430 (91595) | 91595..91816 | + | 222 | WP_273817132.1 | IS3 family transposase ISBope1 | Transposase |
| PS038_RS23435 (92289) | 92289..93649 | + | 1361 | Protein_102 | hypothetical protein | VF |
| PS038_RS23440 (93711) | 93711..93986 | + | 276 | WP_273817993.1 | secretion protein EspO | - |
| PS038_RS23445 (94188) | 94188..95028 | + | 841 | Protein_104 | IS481 family transposase ISEc18 | Transposase |
| PS038_RS23450 (95116) | 95116..95279 | - | 164 | Protein_105 | IS3 family transposase | - |
| PS038_RS23455 (95309) | 95309..96880 | - | 1572 | WP_273818331.1 | IS66 family transposase ISCro1 | Transposase |
| PS038_RS23460 (96900) | 96900..97247 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| PS038_RS23465 (97247) | 97247..97894 | - | 648 | WP_273817995.1 | IS66 family transposase IS679 | Transposase |
| PS038_RS23470 (98141) | 98141..98263 | - | 123 | WP_223200913.1 | Hok/Gef family protein | Toxin Detail |
| PS038_RS23475 (98208) | 98208..98360 | - | 153 | Protein_110 | DUF5431 family protein | - |
| - (98348) | 98348..98564 | - | 217 | NuclAT_0 | - | - |
| - (98348) | 98348..98564 | - | 217 | NuclAT_0 | - | - |
| - (98348) | 98348..98564 | - | 217 | NuclAT_0 | - | - |
| - (98348) | 98348..98564 | - | 217 | NuclAT_0 | - | - |
| PS038_RS23480 (98509) | 98509..99295 | - | 787 | Protein_111 | plasmid SOS inhibition protein A | - |
| PS038_RS23485 (99292) | 99292..99642 | - | 351 | Protein_112 | conjugation system SOS inhibitor PsiB | - |
| PS038_RS23490 (99722) | 99722..99913 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| PS038_RS23495 (99858) | 99858..100331 | - | 474 | WP_273818332.1 | hypothetical protein | - |
| PS038_RS23500 (100378) | 100378..100803 | - | 426 | WP_273818333.1 | antirestriction protein | - |
| PS038_RS23505 (100974) | 100974..101693 | - | 720 | WP_273818367.1 | hypothetical protein | - |
| PS038_RS23510 (101854) | 101854..103023 | + | 1170 | Protein_117 | IS200-IS605 family transposase ISEc46 | Transposase |
| PS038_RS23515 (103063) | 103063..103236 | + | 174 | Protein_118 | DUF4113 domain-containing protein | - |
| PS038_RS23520 (103377) | 103377..104339 | - | 963 | WP_000756325.1 | ParB family protein | - |
| PS038_RS23525 (104336) | 104336..105541 | - | 1206 | WP_000817642.1 | Plasmid partition protein A | VF |
| PS038_RS23530 (105915) | 105915..106085 | + | 171 | WP_000402943.1 | hypothetical protein | - |
| PS038_RS23535 (106258) | 106258..106509 | + | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| PS038_RS23540 (106506) | 106506..106793 | + | 288 | WP_001270417.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PS038_RS23545 (106795) | 106795..107070 | + | 276 | Protein_124 | IS3 family transposase ISKpn37 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|