MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 79665 bp
Accession: NZ_CP117588 Location: 1..79665 Organism: Escherichia albertii strain BIA_40 Replicon: plasmid pEA40_2
Accession: NZ_CP117588 Location: 1..79665 Organism: Escherichia albertii strain BIA_40 Replicon: plasmid pEA40_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PS042_RS24300 (PS042_24300) | 1..858 | + | 858 | WP_256875907.1 | incFII family plasmid replication initiator RepA | - |
| PS042_RS24305 (PS042_24305) | 1561..1719 | + | 159 | WP_204629491.1 | hypothetical protein | - |
| PS042_RS24310 (PS042_24310) | 1774..2043 | + | 270 | WP_087905370.1 | type II toxin-antitoxin system antitoxin YacA | - |
| PS042_RS24315 (PS042_24315) | 2043..2150 | + | 108 | Protein_3 | type II toxin-antitoxin system toxin YacB | - |
| PS042_RS24325 (PS042_24325) | 4178..11947 | + | 7770 | WP_256880787.1 | hypothetical protein | VF |
| PS042_RS24330 (PS042_24330) | 11978..12361 | + | 384 | Protein_6 | IS3 family transposase | - |
| PS042_RS24335 (PS042_24335) | 12672..13706 | - | 1035 | Protein_7 | IS3 family transposase IS2 | Transposase |
| PS042_RS24340 (PS042_24340) | 13700..13837 | + | 138 | Protein_8 | AAA family ATPase | - |
| PS042_RS24345 (PS042_24345) | 13895..14268 | - | 374 | Protein_9 | DDE-type integrase/transposase/recombinase | - |
| PS042_RS24350 (PS042_24350) | 14341..15509 | + | 1169 | WP_256879713.1 | IS3 family transposase IS911 | Transposase |
| PS042_RS24355 (PS042_24355) | 15715..16111 | + | 397 | Protein_11 | IS481 family transposase | - |
| PS042_RS24360 (PS042_24360) | 16616..17251 | + | 636 | WP_204629485.1 | hypothetical protein | VF |
| PS042_RS24365 (PS042_24365) | 17388..18348 | + | 961 | Protein_13 | IS630 family transposase ISSpu2 | Transposase |
| PS042_RS24370 (PS042_24370) | 18541..20193 | + | 1653 | WP_256875903.1 | hypothetical protein | VF |
| PS042_RS24375 (PS042_24375) | 20306..20485 | + | 180 | Protein_15 | IS3 family transposase | - |
| PS042_RS24380 (PS042_24380) | 20491..20630 | - | 140 | Protein_16 | IS110 family transposase | - |
| PS042_RS24385 (PS042_24385) | 20719..20832 | + | 114 | Protein_17 | hypothetical protein | - |
| PS042_RS24390 (PS042_24390) | 20953..21693 | + | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| PS042_RS24395 (PS042_24395) | 21979..22596 | - | 618 | Protein_19 | RepB family plasmid replication initiator protein | - |
| PS042_RS24400 (PS042_24400) | 22594..22797 | + | 204 | Protein_20 | Tn3 family transposase | - |
| PS042_RS24405 (PS042_24405) | 22942..23364 | + | 423 | WP_256875902.1 | hypothetical protein | - |
| PS042_RS24410 (PS042_24410) | 23594..24391 | + | 798 | WP_256875901.1 | hypothetical protein | VF |
| PS042_RS24415 (PS042_24415) | 24430..24891 | + | 462 | Protein_23 | hypothetical protein | VF |
| PS042_RS24420 (PS042_24420) | 24914..26141 | - | 1228 | Protein_24 | IS3 family transposase IS2 | Transposase |
| PS042_RS24425 (PS042_24425) | 26456..26524 | - | 69 | WP_256880790.1 | hypothetical protein | - |
| PS042_RS24430 (PS042_24430) | 28214..29035 | + | 822 | WP_124783397.1 | polysaccharide deacetylase family protein | - |
| PS042_RS24435 (PS042_24435) | 29035..30141 | + | 1107 | WP_124783396.1 | glycosyltransferase family 4 protein | - |
| PS042_RS24440 (PS042_24440) | 30229..31226 | + | 998 | Protein_28 | Lipid A biosynthesis myristoyltransferase | VF |
| PS042_RS24445 (PS042_24445) | 31857..32804 | + | 948 | WP_256875899.1 | VirK/YbjX family protein | - |
| PS042_RS24450 (PS042_24450) | 33040..33185 | + | 146 | Protein_30 | IS256 family transposase ISSod4 | Transposase |
| PS042_RS24455 (PS042_24455) | 33345..33461 | - | 117 | WP_272501134.1 | S6 family peptidase | - |
| PS042_RS24460 (PS042_24460) | 34068..34553 | + | 486 | WP_054411359.1 | heme-binding protein | - |
| PS042_RS24465 (PS042_24465) | 35298..35677 | - | 380 | Protein_33 | transposase | - |
| PS042_RS24470 (PS042_24470) | 35747..38743 | - | 2997 | WP_256875898.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| PS042_RS24475 (PS042_24475) | 38914..39478 | + | 565 | Protein_35 | Tn3 family transposase TnBth3 | Transposase |
| PS042_RS24480 (PS042_24480) | 39577..40765 | + | 1189 | Protein_36 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| PS042_RS24485 (PS042_24485) | 40976..42568 | - | 1593 | WP_256878671.1 | IS66 family transposase ISEc47 | Transposase |
| PS042_RS24490 (PS042_24490) | 42599..42949 | - | 351 | WP_000624718.1 | IS66 family transposase ISEc47 | Transposase |
| PS042_RS24495 (PS042_24495) | 42946..43365 | - | 420 | WP_065106474.1 | IS66 family transposase ISEc23 | Transposase |
| PS042_RS24500 (PS042_24500) | 43452..43637 | + | 186 | Protein_40 | IS256 family transposase IS1414 | Transposase |
| PS042_RS24505 (PS042_24505) | 43633..43902 | - | 270 | Protein_41 | tyrosine-type recombinase/integrase | - |
| PS042_RS24510 (PS042_24510) | 43962..44558 | - | 597 | WP_059217960.1 | hypothetical protein | - |
| PS042_RS24515 (PS042_24515) | 44546..44815 | - | 270 | WP_000343793.1 | hypothetical protein | - |
| PS042_RS24520 (PS042_24520) | 45412..45630 | + | 219 | WP_000813639.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| PS042_RS24525 (PS042_24525) | 45632..45937 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| PS042_RS24530 (PS042_24530) | 45938..46746 | + | 809 | Protein_46 | site-specific integrase | - |
| PS042_RS24535 (PS042_24535) | 46926..47570 | + | 645 | WP_001144036.1 | ParA family protein | - |
| PS042_RS24540 (PS042_24540) | 47657..47965 | + | 309 | WP_000030204.1 | molecular chaperone GroEL | - |
| PS042_RS24545 (PS042_24545) | 48377..49357 | + | 981 | WP_256875926.1 | plasmid segregation protein ParM | - |
| PS042_RS24550 (PS042_24550) | 49350..49766 | + | 417 | WP_256875925.1 | plasmid partitioning/stability family protein | - |
| PS042_RS24555 (PS042_24555) | 49768..50190 | - | 423 | Protein_51 | DUF4113 domain-containing protein | - |
| PS042_RS24560 (PS042_24560) | 50305..50556 | + | 252 | WP_001139207.1 | plasmid stabilization protein | Antitoxin Detail |
| PS042_RS24565 (PS042_24565) | 50553..50840 | + | 288 | WP_000222775.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PS042_RS24570 (PS042_24570) | 50850..51221 | + | 372 | WP_256875924.1 | hypothetical protein | - |
| PS042_RS24575 (PS042_24575) | 52122..52708 | + | 587 | Protein_55 | serine acetyltransferase | - |
| PS042_RS24580 (PS042_24580) | 52988..53581 | - | 594 | WP_001523457.1 | ProQ/FINO family protein | - |
| PS042_RS24585 (PS042_24585) | 54585..55349 | + | 765 | WP_256875923.1 | helix-turn-helix domain-containing protein | - |
| PS042_RS24590 (PS042_24590) | 55503..56288 | - | 786 | Protein_58 | porin OmpC | - |
| PS042_RS24595 (PS042_24595) | 56299..56427 | + | 129 | Protein_59 | hypothetical protein | - |
| PS042_RS24600 (PS042_24600) | 56600..56953 | + | 354 | WP_256875922.1 | colicin M immunity protein | - |
| PS042_RS24605 (PS042_24605) | 57003..57818 | - | 816 | WP_000449473.1 | lipid II-degrading bacteriocin colicin M | - |
| PS042_RS24610 (PS042_24610) | 58062..58589 | + | 528 | WP_033800732.1 | colicin B immunity protein | - |
| PS042_RS24615 (PS042_24615) | 58607..60142 | - | 1536 | WP_256875921.1 | pore-forming bacteriocin colicin B | - |
| PS042_RS24620 (PS042_24620) | 60580..60915 | + | 336 | WP_256875920.1 | hypothetical protein | - |
| PS042_RS24625 (PS042_24625) | 61165..61560 | + | 396 | WP_256875919.1 | hypothetical protein | - |
| PS042_RS24630 (PS042_24630) | 61709..62014 | + | 306 | WP_256875918.1 | hypothetical protein | - |
| PS042_RS24635 (PS042_24635) | 62299..62502 | + | 204 | Protein_67 | hypothetical protein | - |
| PS042_RS24640 (PS042_24640) | 62857..63732 | + | 876 | Protein_68 | IS481 family transposase ISErsp1 | Transposase |
| PS042_RS24645 (PS042_24645) | 63762..65354 | - | 1593 | WP_256878671.1 | IS66 family transposase ISEc47 | Transposase |
| PS042_RS24650 (PS042_24650) | 65385..65735 | - | 351 | WP_000624718.1 | IS66 family transposase ISEc47 | Transposase |
| PS042_RS24655 (PS042_24655) | 65732..66151 | - | 420 | WP_065106474.1 | IS66 family transposase ISEc23 | Transposase |
| PS042_RS24660 (PS042_24660) | 66235..67095 | - | 861 | Protein_72 | translesion error-prone DNA polymerase V subunit UmuC | - |
| PS042_RS24665 (PS042_24665) | 67095..67532 | - | 438 | Protein_73 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| PS042_RS24670 (PS042_24670) | 67529..67771 | - | 243 | WP_256875913.1 | DinI-like family protein | - |
| PS042_RS24675 (PS042_24675) | 67774..68106 | + | 333 | WP_256875912.1 | CPBP family intramembrane metalloprotease | - |
| PS042_RS24680 (PS042_24680) | 68199..68456 | + | 258 | WP_000557618.1 | type II toxin-antitoxin system antitoxin PemI | - |
| PS042_RS24685 (PS042_24685) | 68389..68790 | + | 402 | WP_256875911.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| PS042_RS24690 (PS042_24690) | 68945..70054 | - | 1110 | WP_256875910.1 | DUF4238 domain-containing protein | - |
| PS042_RS24695 (PS042_24695) | 70487..70690 | + | 204 | Protein_79 | hypothetical protein | - |
| PS042_RS24700 (PS042_24700) | 70970..71365 | - | 396 | WP_000445934.1 | plasmid partitioning/stability family protein | - |
| PS042_RS24705 (PS042_24705) | 71365..72324 | - | 960 | WP_229467669.1 | plasmid segregation protein ParM | - |
| PS042_RS24710 (PS042_24710) | 72576..72866 | + | 291 | Protein_82 | hypothetical protein | - |
| PS042_RS24715 (PS042_24715) | 72943..73011 | + | 69 | Protein_83 | adenine-specific DNA-methyltransferase | - |
| PS042_RS24720 (PS042_24720) | 73096..74796 | - | 1701 | WP_096961645.1 | group II intron reverse transcriptase/maturase | - |
| PS042_RS24725 (PS042_24725) | 75418..76029 | + | 612 | Protein_85 | DNA methylase | - |
| PS042_RS24730 (PS042_24730) | 76030..76251 | + | 222 | WP_001104879.1 | hypothetical protein | - |
| PS042_RS24735 (PS042_24735) | 76232..76699 | + | 468 | WP_256875909.1 | DUF1380 family protein | - |
| PS042_RS24740 (PS042_24740) | 76750..77526 | + | 777 | WP_256875908.1 | hypothetical protein | - |
| PS042_RS24745 (PS042_24745) | 77631..78821 | + | 1191 | Protein_89 | IS4 family transposase ISEc60 | Transposase |
| PS042_RS24750 (PS042_24750) | 79109..79366 | + | 258 | WP_000083843.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|