MGE detailed information
MGE type: Conjugative plasmid MGE length: 91469 bp
Accession: NZ_CP117560 Location: 1..91469 Organism: Escherichia albertii strain BIA_8 Replicon: plasmid pEA8_2
Accession: NZ_CP117560 Location: 1..91469 Organism: Escherichia albertii strain BIA_8 Replicon: plasmid pEA8_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PS052_RS23800 (46) | 46..1077 | + | 1032 | WP_273765795.1 | plasmid replication initiator RepA | - |
| PS052_RS23805 (2333) | 2333..3520 | - | 1188 | WP_187183929.1 | IS91 family transposase ISEc37 | Transposase |
| PS052_RS23810 (3520) | 3520..3885 | - | 366 | WP_024223721.1 | hypothetical protein | - |
| PS052_RS23815 (4405) | 4405..5466 | - | 1062 | WP_024223720.1 | hypothetical protein | - |
| PS052_RS23820 (5453) | 5453..5821 | - | 369 | WP_053264260.1 | DUF305 domain-containing protein | - |
| PS052_RS23825 (6243) | 6243..6439 | + | 197 | Protein_5 | IS21 family transposase | - |
| PS052_RS23830 (6691) | 6691..6936 | - | 246 | WP_071791704.1 | hypothetical protein | - |
| PS052_RS23835 (7360) | 7360..8547 | - | 1188 | WP_273765796.1 | IS91 family transposase ISEc37 | Transposase |
| PS052_RS23840 (8547) | 8547..8912 | - | 366 | WP_024223721.1 | hypothetical protein | - |
| PS052_RS23845 (9001) | 9001..9267 | + | 267 | Protein_9 | MFS transporter | - |
| PS052_RS23850 (9267) | 9267..10697 | + | 1431 | WP_077816665.1 | glycoside hydrolase family 32 protein | - |
| PS052_RS23855 (10791) | 10791..11717 | + | 927 | WP_024222977.1 | Fructokinase | VF |
| PS052_RS23860 (11972) | 11972..13365 | + | 1394 | Protein_12 | carbohydrate porin | - |
| PS052_RS23865 (14255) | 14255..16822 | + | 2568 | WP_273765797.1 | hypothetical protein | VF |
| PS052_RS23870 (16761) | 16761..17753 | + | 993 | WP_273765798.1 | Outer membrane protein IcsA autotransporter | VF |
| PS052_RS23875 (18262) | 18262..18411 | - | 150 | Protein_15 | IS256 family transposase | - |
| PS052_RS23880 (18455) | 18455..20074 | - | 1620 | Protein_16 | ISL3 family transposase ISEc38 | Transposase |
| PS052_RS23885 (20170) | 20170..21282 | + | 1113 | Protein_17 | IS256 family transposase IS1414 | Transposase |
| PS052_RS23890 (21360) | 21360..21644 | - | 285 | Protein_18 | IS91 family transposase ISSbo1 | Transposase |
| PS052_RS23895 (21639) | 21639..21746 | - | 108 | Protein_19 | IS91 family transposase ISSbo1 | Transposase |
| PS052_RS23900 (21835) | 21835..22020 | - | 186 | Protein_20 | IS3 family transposase IS1203 | Transposase |
| PS052_RS23905 (22091) | 22091..24070 | + | 1980 | WP_024222956.1 | PhoX family phosphatase | - |
| PS052_RS23910 (24348) | 24348..24968 | - | 621 | Protein_22 | esterase-like activity of phytase family protein | - |
| PS052_RS23915 (25015) | 25015..25812 | - | 798 | WP_273764657.1 | IS21 family transposase IS21 | Transposase |
| PS052_RS23920 (25812) | 25812..26984 | - | 1173 | WP_053264206.1 | IS21 family transposase IS21 | Transposase |
| PS052_RS23925 (27079) | 27079..27825 | - | 747 | Protein_25 | esterase-like activity of phytase family protein | - |
| PS052_RS23930 (27961) | 27961..28092 | - | 132 | Protein_26 | IS3 family transposase | - |
| PS052_RS23935 (28245) | 28245..29018 | - | 774 | WP_024222958.1 | hypothetical protein | - |
| PS052_RS23940 (29746) | 29746..30952 | + | 1207 | Protein_28 | IS3 family transposase | - |
| PS052_RS23945 (31633) | 31633..31917 | + | 285 | WP_053264228.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| PS052_RS23950 (31917) | 31917..32192 | + | 276 | WP_024222961.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PS052_RS23955 (32285) | 32285..32488 | + | 204 | Protein_31 | hypothetical protein | - |
| PS052_RS23960 (32977) | 32977..33189 | - | 213 | WP_143364308.1 | hypothetical protein | - |
| PS052_RS23965 (33792) | 33792..33986 | + | 195 | WP_137495149.1 | hypothetical protein | - |
| PS052_RS23975 (35187) | 35187..35951 | + | 765 | WP_000340226.1 | helix-turn-helix domain-containing protein | - |
| PS052_RS23980 (36115) | 36115..37224 | - | 1110 | WP_000737315.1 | porin OmpC | - |
| PS052_RS23985 (38256) | 38256..38846 | - | 591 | WP_053264227.1 | hypothetical protein | - |
| PS052_RS23990 (38846) | 38846..39103 | - | 258 | WP_001542562.1 | hypothetical protein | - |
| PS052_RS23995 (39657) | 39657..40007 | + | 351 | WP_000493398.1 | hypothetical protein | - |
| PS052_RS24000 (40051) | 40051..40740 | + | 690 | WP_273765799.1 | hypothetical protein | - |
| PS052_RS24005 (40737) | 40737..41528 | + | 792 | WP_000016494.1 | site-specific integrase | - |
| PS052_RS24010 (41666) | 41666..41941 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| PS052_RS24015 (41935) | 41935..42579 | - | 645 | WP_000633913.1 | division plane positioning ATPase MipZ | - |
| PS052_RS24020 (42801) | 42801..43772 | + | 972 | WP_001103690.1 | plasmid segregation protein ParM | - |
| PS052_RS24025 (43777) | 43777..44169 | + | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| PS052_RS24030 (44174) | 44174..45441 | - | 1268 | Protein_46 | translesion error-prone DNA polymerase V subunit UmuC | - |
| PS052_RS24035 (45441) | 45441..45878 | - | 438 | WP_225382336.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| PS052_RS24040 (45875) | 45875..46123 | - | 249 | WP_000618111.1 | DinI-like family protein | - |
| PS052_RS24045 (46541) | 46541..47443 | + | 903 | WP_273765800.1 | DUF1281 domain-containing protein | - |
| PS052_RS24050 (47440) | 47440..47750 | + | 311 | Protein_50 | hypothetical protein | - |
| PS052_RS24055 (47827) | 47827..48510 | + | 684 | WP_021013243.1 | DNA methylase | - |
| PS052_RS24060 (48511) | 48511..48732 | + | 222 | WP_001104879.1 | hypothetical protein | - |
| PS052_RS24065 (48713) | 48713..49180 | + | 468 | WP_023148244.1 | DUF1380 family protein | - |
| PS052_RS24070 (49225) | 49225..49859 | + | 635 | Protein_54 | hypothetical protein | - |
| PS052_RS24075 (50277) | 50277..50702 | + | 426 | WP_001198941.1 | antirestriction protein | - |
| PS052_RS24080 (50749) | 50749..50943 | + | 195 | Protein_56 | hypothetical protein | - |
| PS052_RS24085 (51136) | 51136..52677 | + | 1542 | WP_273765790.1 | IS21 family transposase ISEc12 | Transposase |
| PS052_RS24090 (52692) | 52692..53438 | + | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| PS052_RS24095 (53525) | 53525..53758 | + | 234 | Protein_59 | hypothetical protein | - |
| PS052_RS24100 (53755) | 53755..53946 | + | 192 | WP_045177269.1 | hypothetical protein | - |
| PS052_RS24105 (54279) | 54279..54347 | - | 69 | Protein_61 | pilus protein | - |
| PS052_RS24110 (54716) | 54716..55243 | + | 528 | WP_160221284.1 | single-stranded DNA-binding protein | - |
| PS052_RS24115 (55301) | 55301..55534 | + | 234 | WP_000006012.1 | DUF905 family protein | - |
| PS052_RS24120 (55593) | 55593..57551 | + | 1959 | WP_273765791.1 | ParB/RepB/Spo0J family partition protein | - |
| PS052_RS24125 (57606) | 57606..58040 | + | 435 | WP_001535709.1 | conjugation system SOS inhibitor PsiB | - |
| PS052_RS24130 (58037) | 58037..58756 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| PS052_RS24135 (58753) | 58753..59349 | + | 597 | WP_273765792.1 | hypothetical protein | - |
| PS052_RS24140 (59812) | 59812..60312 | + | 501 | WP_225382293.1 | antirestriction protein ArdA | - |
| PS052_RS24145 (61041) | 61041..61157 | + | 117 | Protein_69 | post-segregation killing protein PndC | - |
| PS052_RS24150 (61216) | 61216..62012 | - | 797 | Protein_70 | IS21 family transposase IS21 | Transposase |
| PS052_RS24155 (62012) | 62012..63184 | - | 1173 | WP_053264206.1 | IS21 family transposase IS21 | Transposase |
| PS052_RS24160 (63288) | 63288..63608 | + | 321 | Protein_72 | post-segregation killing protein PndC | - |
| PS052_RS24165 (63702) | 63702..63968 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| PS052_RS24170 (64033) | 64033..64935 | + | 903 | WP_001760742.1 | ISNCY family transposase ISRor2 | VF |
| PS052_RS24175 (64997) | 64997..65167 | + | 171 | WP_042060660.1 | hypothetical protein | - |
| PS052_RS24180 (65198) | 65198..65449 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| PS052_RS24185 (66030) | 66030..66878 | + | 849 | WP_001599394.1 | DUF4942 domain-containing protein | - |
| PS052_RS24190 (66964) | 66964..67299 | - | 336 | WP_089618595.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| PS052_RS24195 (67533) | 67533..67865 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| PS052_RS24200 (67876) | 67876..70572 | + | 2697 | WP_273765793.1 | hypothetical protein | Relaxase |
| PS052_RS24205 (70609) | 70609..72900 | - | 2292 | WP_072255563.1 | F-type conjugative transfer protein TrbC | - |
| PS052_RS24210 (72893) | 72893..73963 | - | 1071 | WP_273765794.1 | IncI1-type conjugal transfer protein TrbB | - |
| PS052_RS24215 (73982) | 73982..75190 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (75370) | 75370..75432 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (75370) | 75370..75432 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (75370) | 75370..75432 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (75370) | 75370..75432 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| PS052_RS24220 (75482) | 75482..75634 | + | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| PS052_RS24225 (75706) | 75706..75957 | - | 252 | WP_001291965.1 | hypothetical protein | - |
| PS052_RS24230 (76456) | 76456..76551 | + | 96 | WP_001303310.1 | DinQ-like type I toxin DqlB | - |
| PS052_RS24235 (76616) | 76616..76792 | - | 177 | WP_001054897.1 | hypothetical protein | - |
| PS052_RS24245 (78100) | 78100..79035 | - | 936 | Protein_89 | hypothetical protein | VF |
| PS052_RS24250 (79049) | 79049..79486 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| PS052_RS24255 (79486) | 79486..80552 | - | 1067 | Protein_91 | hypothetical protein | VF |
| PS052_RS24260 (80884) | 80884..81309 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| PS052_RS24265 (81306) | 81306..81656 | + | 351 | WP_097309003.1 | IS66 family transposase ISEc23 | Transposase |
| PS052_RS24270 (81687) | 81687..83300 | + | 1614 | WP_273764708.1 | IS66 family transposase ISEc23 | Transposase |
| PS052_RS24275 (83331) | 83331..83921 | - | 591 | Protein_95 | IS66 family transposase ISEc8 | Transposase |
| PS052_RS24280 (83971) | 83971..84318 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| PS052_RS24285 (84315) | 84315..84695 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| PS052_RS24290 (84988) | 84988..86216 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| PS052_RS24295 (86559) | 86559..87011 | - | 453 | WP_000008892.1 | hypothetical protein | - |
| PS052_RS24300 (87054) | 87054..87303 | - | 250 | Protein_100 | PilI type IV pilus biogenesis protein | - |
| PS052_RS24305 (87571) | 87571..88137 | - | 567 | WP_000776428.1 | protein TraD | - |
| PS052_RS24310 (88151) | 88151..88834 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| PS052_RS24315 (89088) | 89088..89621 | - | 534 | WP_001303319.1 | transcription termination/antitermination NusG family protein | - |
| PS052_RS24320 (90074) | 90074..90361 | - | 288 | WP_021013281.1 | conjugal transfer protein TraA | - |
| PS052_RS24325 (90399) | 90399..90557 | - | 159 | Protein_105 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|