MGE detailed information
MGE type: Prophage MGE length: 43798 bp
Accession: NZ_CP117556 Location: 2354664..2398461 Organism: Escherichia albertii strain BIA_89-5 Replicon: chromosome
Accession: NZ_CP117556 Location: 2354664..2398461 Organism: Escherichia albertii strain BIA_89-5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PS032_RS11690 (2350679) | 2350679..2350726 | + | 48 | WP_212741658.1 | hypothetical protein | - |
| PS032_RS11695 (2350740) | 2350740..2351723 | + | 984 | WP_000387364.1 | zinc transporter ZntB | - |
| PS032_RS11700 (2351998) | 2351998..2352171 | + | 174 | WP_032275239.1 | protein YnaL | - |
| PS032_RS11705 (2352201) | 2352201..2353574 | + | 1374 | WP_137650219.1 | ATP-dependent RNA helicase DbpA | - |
| PS032_RS11710 (2353677) | 2353677..2354612 | - | 936 | WP_059228647.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| PS032_RS11715 (2354664) | 2354664..2355899 | - | 1236 | WP_137653527.1 | hypothetical protein ; Integrase | Integrase |
| PS032_RS11720 (2355901) | 2355901..2356116 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| - (2356220) | 2356220..2356398 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2356220) | 2356220..2356398 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2356220) | 2356220..2356398 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2356220) | 2356220..2356398 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| PS032_RS11725 (2356195) | 2356195..2356404 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| PS032_RS11730 (2356397) | 2356397..2356591 | - | 195 | WP_137650428.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| PS032_RS11735 (2356648) | 2356648..2357457 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| PS032_RS11740 (2357450) | 2357450..2360083 | - | 2634 | WP_137650429.1 | exodeoxyribonuclease VIII | - |
| PS032_RS11745 (2360185) | 2360185..2360460 | - | 276 | WP_044805262.1 | hypothetical protein | - |
| PS032_RS11750 (2360596) | 2360596..2360817 | - | 222 | WP_062898151.1 | cell division protein FtsZ | - |
| PS032_RS11755 (2360864) | 2360864..2361715 | - | 852 | WP_137650430.1 | Rha family phage regulatory protein | - |
| PS032_RS11760 (2362221) | 2362221..2362415 | + | 195 | WP_074464194.1 | hypothetical protein | - |
| PS032_RS11765 (2362381) | 2362381..2362599 | - | 219 | WP_000232638.1 | hypothetical protein | - |
| PS032_RS11770 (2362877) | 2362877..2363158 | - | 282 | WP_042898926.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PS032_RS11775 (2363158) | 2363158..2363349 | - | 192 | WP_001090452.1 | hypothetical protein | Antitoxin Detail |
| PS032_RS11780 (2363380) | 2363380..2363778 | - | 399 | WP_000209118.1 | helix-turn-helix domain-containing protein | - |
| PS032_RS11785 (2363895) | 2363895..2364161 | + | 267 | WP_074404412.1 | YdaS family helix-turn-helix protein | - |
| PS032_RS11790 (2364158) | 2364158..2364583 | + | 426 | WP_149452502.1 | toxin YdaT family protein | - |
| PS032_RS11795 (2364655) | 2364655..2365695 | + | 1041 | WP_137650431.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| PS032_RS11800 (2365688) | 2365688..2366149 | + | 462 | WP_262409891.1 | replication protein P | - |
| PS032_RS11805 (2366182) | 2366182..2366924 | + | 743 | Protein_2312 | DUF1627 domain-containing protein | - |
| PS032_RS11810 (2366911) | 2366911..2367117 | + | 207 | WP_053893343.1 | hypothetical protein | - |
| PS032_RS11815 (2367114) | 2367114..2367368 | + | 255 | WP_001294161.1 | hypothetical protein | - |
| PS032_RS11820 (2367361) | 2367361..2367492 | + | 132 | Protein_2315 | hypothetical protein | - |
| PS032_RS11825 (2367498) | 2367498..2368538 | - | 1041 | WP_001178361.1 | IS481 family transposase ISKpn28 | Transposase |
| PS032_RS11830 (2368610) | 2368610..2368765 | + | 156 | WP_149452356.1 | type I toxin-antitoxin system toxin HokD | - |
| PS032_RS11835 (2369325) | 2369325..2369924 | + | 600 | WP_000940333.1 | DUF1367 family protein | - |
| PS032_RS11840 (2369924) | 2369924..2370214 | + | 291 | WP_000228038.1 | DUF1364 domain-containing protein | - |
| PS032_RS11845 (2370211) | 2370211..2370765 | + | 555 | WP_137650435.1 | DUF1133 family protein | - |
| PS032_RS11850 (2371059) | 2371059..2371529 | - | 471 | WP_137650436.1 | hypothetical protein | - |
| PS032_RS11855 (2371673) | 2371673..2371879 | + | 207 | Protein_2322 | tellurite/colicin resistance protein | - |
| PS032_RS11860 (2371876) | 2371876..2372028 | + | 153 | WP_000833645.1 | DUF3927 family protein | - |
| PS032_RS11865 (2372117) | 2372117..2372509 | + | 393 | WP_137650437.1 | putative holin | - |
| PS032_RS11870 (2372499) | 2372499..2372777 | + | 279 | WP_137650438.1 | phage holin family protein | - |
| PS032_RS11875 (2372779) | 2372779..2373324 | + | 546 | WP_273807080.1 | putative peptidoglycan-binding domain-containing protein | - |
| PS032_RS11880 (2373485) | 2373485..2373667 | + | 183 | WP_123017438.1 | hypothetical protein | - |
| PS032_RS11885 (2373685) | 2373685..2373819 | + | 135 | WP_001284011.1 | hypothetical protein | - |
| PS032_RS11890 (2373851) | 2373851..2374006 | + | 156 | WP_171001379.1 | hypothetical protein | - |
| PS032_RS11895 (2374054) | 2374054..2374227 | + | 174 | WP_237428020.1 | hypothetical protein | - |
| PS032_RS11900 (2374286) | 2374286..2375035 | + | 750 | WP_001118114.1 | hypothetical protein | - |
| PS032_RS11905 (2375001) | 2375001..2376404 | + | 1404 | WP_000200750.1 | PBSX family phage terminase large subunit | - |
| PS032_RS11910 (2376404) | 2376404..2377870 | + | 1467 | WP_000113487.1 | DUF1073 domain-containing protein | - |
| PS032_RS11915 (2377761) | 2377761..2378495 | + | 735 | WP_273807081.1 | phage minor head protein | - |
| PS032_RS11920 (2378510) | 2378510..2379730 | + | 1221 | WP_000873185.1 | DUF2213 domain-containing protein | - |
| PS032_RS11925 (2379734) | 2379734..2380240 | + | 507 | WP_001066727.1 | hypothetical protein | - |
| PS032_RS11930 (2380252) | 2380252..2381193 | + | 942 | WP_137653584.1 | DUF2184 domain-containing protein | - |
| PS032_RS11935 (2381190) | 2381190..2381423 | - | 234 | Protein_2338 | hypothetical protein | - |
| PS032_RS11940 (2381422) | 2381422..2381829 | + | 408 | WP_032197767.1 | DUF4054 domain-containing protein | - |
| PS032_RS11945 (2381826) | 2381826..2382380 | + | 555 | WP_033544652.1 | hypothetical protein | - |
| PS032_RS11950 (2382367) | 2382367..2382756 | + | 390 | WP_001142480.1 | hypothetical protein | - |
| PS032_RS11955 (2382731) | 2382731..2383294 | + | 564 | WP_033544654.1 | hypothetical protein | - |
| PS032_RS11960 (2383298) | 2383298..2384443 | + | 1146 | WP_137653590.1 | DUF3383 family protein | - |
| PS032_RS11965 (2384454) | 2384454..2384894 | + | 441 | WP_000109249.1 | DUF3277 family protein | - |
| PS032_RS11970 (2384898) | 2384898..2385350 | + | 453 | WP_000393964.1 | hypothetical protein | - |
| PS032_RS11975 (2385362) | 2385362..2385538 | + | 177 | WP_023141050.1 | hypothetical protein | - |
| PS032_RS11980 (2385528) | 2385528..2387513 | + | 1986 | WP_137653561.1 | lytic transglycosylase catalytic | - |
| PS032_RS11985 (2387513) | 2387513..2388100 | + | 588 | WP_001298404.1 | hypothetical protein | - |
| PS032_RS11990 (2388100) | 2388100..2388402 | + | 303 | WP_096988379.1 | hypothetical protein | - |
| PS032_RS11995 (2388405) | 2388405..2389469 | + | 1065 | WP_096988378.1 | hypothetical protein | - |
| PS032_RS12000 (2389472) | 2389472..2389936 | + | 465 | WP_137653560.1 | hypothetical protein | - |
| PS032_RS12005 (2390135) | 2390135..2390908 | + | 774 | WP_062898041.1 | hypothetical protein | - |
| PS032_RS12010 (2390905) | 2390905..2391285 | + | 381 | WP_137650573.1 | hypothetical protein | - |
| PS032_RS12015 (2391346) | 2391346..2392098 | + | 753 | WP_074464336.1 | Gp138 family membrane-puncturing spike protein | - |
| PS032_RS12020 (2392098) | 2392098..2392169 | + | 72 | Protein_2355 | hypothetical protein | - |
| PS032_RS12025 (2392261) | 2392261..2393489 | + | 1229 | WP_089541817.1 | IS3 family transposase IS2 | Transposase |
| PS032_RS12030 (2393500) | 2393500..2393787 | + | 288 | Protein_2357 | hypothetical protein | - |
| PS032_RS12035 (2393787) | 2393787..2394986 | + | 1200 | WP_097340187.1 | baseplate J/gp47 family protein | - |
| PS032_RS12040 (2394983) | 2394983..2395663 | + | 681 | WP_137650575.1 | DUF2612 domain-containing protein | - |
| PS032_RS12045 (2395663) | 2395663..2396481 | + | 819 | WP_137650576.1 | phage tail protein | - |
| PS032_RS12050 (2396481) | 2396481..2397083 | + | 603 | WP_137650577.1 | tail fiber assembly protein | - |
| PS032_RS12055 (2397055) | 2397055..2397465 | - | 411 | WP_072127596.1 | tail fiber assembly protein | - |
| PS032_RS12060 (2397491) | 2397491..2397877 | - | 387 | WP_149452565.1 | phage tail protein | - |
| PS032_RS12065 (2397907) | 2397907..2398461 | + | 555 | WP_001568589.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| PS032_RS12070 (2398875) | 2398875..2399249 | - | 375 | Protein_2365 | tyrosine-type recombinase/integrase | - |
| PS032_RS12075 (2399529) | 2399529..2400164 | + | 636 | WP_137650103.1 | T3SS effector NleG family protein | - |
| PS032_RS12080 (2400623) | 2400623..2401063 | + | 441 | WP_010340759.1 | hypothetical protein | - |
| PS032_RS12085 (2402102) | 2402102..2402347 | + | 246 | WP_010340761.1 | hypothetical protein | - |
| PS032_RS12090 (2402351) | 2402351..2402785 | - | 435 | WP_010340763.1 | universal stress protein UspF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|