MGE detailed information
MGE type: Genomic_island MGE length: 12086 bp
Accession: NZ_CP117404 Location: 2417116..2429201 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain RM085 Replicon: chromosome
Accession: NZ_CP117404 Location: 2417116..2429201 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain RM085 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ07_RS11755 (2413037) | 2413037..2414239 | - | 1203 | WP_000347159.1 | MalY/PatB family protein | - |
| PQQ07_RS11760 (2414252) | 2414252..2415703 | - | 1452 | WP_001276616.1 | Na+/H+ antiporter NhaC | - |
| PQQ07_RS11765 (2415847) | 2415847..2416854 | - | 1008 | WP_000201080.1 | LacI family DNA-binding transcriptional regulator | - |
| PQQ07_RS11770 (2417113) | 2417113..2418579 | + | 1467 | WP_000987828.1 | hypothetical protein | - |
| PQQ07_RS11775 (2419387) | 2419387..2420101 | + | 715 | Protein_2302 | helix-turn-helix domain-containing protein | - |
| PQQ07_RS11780 (2420157) | 2420157..2421065 | - | 909 | WP_010989018.1 | hypothetical protein | - |
| PQQ07_RS11785 (2421208) | 2421208..2421540 | - | 333 | WP_000253154.1 | DUF1493 family protein | - |
| PQQ07_RS11790 (2421530) | 2421530..2421745 | - | 216 | WP_000206207.1 | hypothetical protein | - |
| PQQ07_RS11795 (2421897) | 2421897..2422145 | + | 249 | WP_000885424.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PQQ07_RS11800 (2422135) | 2422135..2422419 | + | 285 | WP_000221343.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PQQ07_RS11805 (2422590) | 2422590..2422979 | + | 390 | WP_000194089.1 | RidA family protein | - |
| PQQ07_RS11810 (2423031) | 2423031..2424110 | - | 1080 | WP_000954688.1 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | - |
| PQQ07_RS11815 (2424303) | 2424303..2424791 | - | 489 | WP_001293638.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| PQQ07_RS11820 (2424836) | 2424836..2426344 | + | 1509 | WP_000199411.1 | FAD-dependent oxidoreductase | - |
| PQQ07_RS11825 (2426334) | 2426334..2427575 | + | 1242 | WP_001095738.1 | MFS transporter | - |
| PQQ07_RS11830 (2427645) | 2427645..2429201 | + | 1557 | WP_000476912.1 | PhoPQ-activated pathogenicity-related family protein | - |
| PQQ07_RS11835 (2429378) | 2429378..2430664 | + | 1287 | WP_000824240.1 | MFS transporter | - |
| PQQ07_RS11840 (2430639) | 2430639..2431664 | + | 1026 | WP_000864924.1 | zinc-binding alcohol dehydrogenase family protein | - |
| PQQ07_RS11845 (2431723) | 2431723..2432514 | - | 792 | WP_001518759.1 | FadR/GntR family transcriptional regulator | - |
| PQQ07_RS11850 (2432560) | 2432560..2433651 | - | 1092 | WP_274896094.1 | linear amide C-N hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297233 | UFRD01000002 | 1156436..1168519 | 0 |