MGE detailed information
MGE type: Genomic_island MGE length: 10427 bp
Accession: NZ_CP117398 Location: 997550..1007976 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain RM015 Replicon: chromosome
Accession: NZ_CP117398 Location: 997550..1007976 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain RM015 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ09_RS04750 (992663) | 992663..993043 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| PQQ09_RS04755 (993099) | 993099..995666 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| PQQ09_RS04760 (995825) | 995825..996346 | + | 522 | WP_024159753.1 | hypothetical protein | - |
| PQQ09_RS04765 (996518) | 996518..997174 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| PQQ09_RS04770 (997521) | 997521..997726 | + | 206 | Protein_935 | IS5 family transposase ISEcl3 | Transposase |
| PQQ09_RS04775 (997799) | 997799..998326 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| PQQ09_RS04780 (998323) | 998323..998613 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| PQQ09_RS04785 (998883) | 998883..999061 | - | 179 | Protein_938 | IS3 family transposase | - |
| PQQ09_RS04790 (999302) | 999302..999628 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| PQQ09_RS04795 (999901) | 999901..1000248 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| PQQ09_RS04800 (1000233) | 1000233..1000682 | - | 450 | WP_000381610.1 | membrane protein | - |
| PQQ09_RS04805 (1001113) | 1001113..1001556 | - | 444 | WP_000715092.1 | hypothetical protein | VF |
| PQQ09_RS04810 (1002013) | 1002013..1002663 | + | 651 | WP_001674874.1 | hypothetical protein | VF |
| PQQ09_RS04815 (1002660) | 1002660..1004348 | + | 1689 | WP_000848113.1 | hypothetical protein | VF |
| PQQ09_RS04820 (1004345) | 1004345..1005463 | + | 1119 | WP_000612171.1 | hypothetical protein | VF |
| PQQ09_RS04825 (1005488) | 1005488..1007545 | + | 2058 | WP_000927219.1 | hypothetical protein | VF |
| PQQ09_RS04830 (1007569) | 1007569..1007976 | + | 408 | WP_001164063.1 | hypothetical protein | VF |
| PQQ09_RS04835 (1007973) | 1007973..1009268 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| PQQ09_RS04840 (1009246) | 1009246..1009689 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| PQQ09_RS04845 (1009689) | 1009689..1010699 | + | 1011 | WP_000503098.1 | SPI-1 type III secretion system protein SpaN | - |
| PQQ09_RS04850 (1010699) | 1010699..1011610 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| PQQ09_RS04855 (1011600) | 1011600..1012274 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| PQQ09_RS04860 (1012300) | 1012300..1012560 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0 |