MGE detailed information
MGE type: Genomic_island MGE length: 13974 bp
Accession: NZ_CP117398 Location: 3750306..3764279 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain RM015 Replicon: chromosome
Accession: NZ_CP117398 Location: 3750306..3764279 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain RM015 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ09_RS18625 () | 3745877..3748321 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| PQQ09_RS18630 () | 3748430..3749197 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| PQQ09_RS18635 () | 3749568..3749975 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| PQQ09_RS18640 () | 3750306..3751025 | + | 720 | WP_000787603.1 | hypothetical protein | VF |
| PQQ09_RS18645 () | 3751029..3751244 | - | 216 | WP_001575654.1 | hypothetical protein | - |
| PQQ09_RS18650 () | 3751361..3752308 | - | 948 | WP_023173520.1 | LysR family transcriptional regulator | - |
| PQQ09_RS18655 () | 3752800..3753040 | - | 241 | Protein_3647 | PerC family transcriptional regulator | - |
| PQQ09_RS18660 () | 3753123..3753944 | - | 822 | WP_000119390.1 | polysaccharide deacetylase family protein | - |
| PQQ09_RS18665 () | 3754350..3754820 | - | 471 | WP_000266939.1 | AfaD family invasin | - |
| PQQ09_RS18670 () | 3754842..3757352 | - | 2511 | WP_000669635.1 | hypothetical protein | VF |
| PQQ09_RS18675 () | 3757376..3758113 | - | 738 | WP_001535430.1 | hypothetical protein | VF |
| PQQ09_RS18680 () | 3758197..3758709 | - | 513 | WP_077905298.1 | pilus assembly protein | - |
| PQQ09_RS18685 () | 3759459..3760163 | - | 705 | Protein_3653 | integrase core domain-containing protein | - |
| PQQ09_RS18690 () | 3760216..3760464 | + | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| PQQ09_RS18695 () | 3760566..3760874 | - | 309 | WP_010988969.1 | hypothetical protein | - |
| PQQ09_RS18700 () | 3760957..3761073 | - | 117 | WP_227457392.1 | hypothetical protein | - |
| - | 3761158..3761580 | - | 423 | - | - | Antitoxin Detail |
| PQQ09_RS18705 () | 3761315..3761590 | + | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
| PQQ09_RS18710 () | 3761643..3762080 | - | 438 | WP_000943619.1 | immunity 26/phosphotriesterase HocA family protein | - |
| PQQ09_RS18715 () | 3762643..3763089 | - | 447 | WP_000935097.1 | protein SciX | - |
| PQQ09_RS18720 () | 3763083..3763952 | - | 870 | Protein_3660 | hypothetical protein | VF |
| PQQ09_RS18725 () | 3764016..3764279 | - | 264 | WP_000932531.1 | hypothetical protein | - |
| PQQ09_RS18730 () | 3764273..3768367 | - | 4095 | WP_000272656.1 | RHS repeat-associated core domain-containing protein | - |
| PQQ09_RS18735 () | 3768386..3768832 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA10103 | NC_016810 | 336540..350828 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26042 | NC_016856 | 337747..352035 | 0.002 |