MGE detailed information
MGE type: Genomic_island MGE length: 10413 bp
Accession: NZ_CP117396 Location: 990506..1000918 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM016 Replicon: chromosome
Accession: NZ_CP117396 Location: 990506..1000918 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM016 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP86_RS04780 (986930) | 986930..987327 | + | 398 | Protein_935 | cytoplasmic protein | - |
| PQP86_RS04785 (987518) | 987518..987706 | + | 189 | Protein_936 | hypothetical protein | - |
| PQP86_RS04790 (987914) | 987914..988582 | + | 669 | WP_000445914.1 | hypothetical protein | - |
| PQP86_RS04795 (988609) | 988609..989103 | + | 495 | WP_000424948.1 | hypothetical protein | - |
| PQP86_RS04800 (989348) | 989348..990004 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| PQP86_RS04805 (990237) | 990237..990646 | + | 410 | Protein_940 | IS5/IS1182 family transposase | - |
| PQP86_RS04810 (990719) | 990719..991246 | - | 528 | WP_000971658.1 | GNAT family N-acetyltransferase | Toxin Detail |
| PQP86_RS04815 (991243) | 991243..991533 | - | 291 | WP_000855694.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| PQP86_RS04820 (991803) | 991803..992003 | - | 201 | Protein_943 | IS3 family transposase | - |
| PQP86_RS04825 (992244) | 992244..992570 | + | 327 | WP_000393305.1 | hypothetical protein | - |
| PQP86_RS04830 (992843) | 992843..993190 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| PQP86_RS04835 (993175) | 993175..993624 | - | 450 | WP_000381612.1 | membrane protein | - |
| PQP86_RS04840 (994056) | 994056..994499 | - | 444 | WP_079798511.1 | hypothetical protein | VF |
| PQP86_RS04845 (994955) | 994955..995605 | + | 651 | WP_001674874.1 | hypothetical protein | VF |
| PQP86_RS04850 (995602) | 995602..997290 | + | 1689 | WP_000848102.1 | hypothetical protein | VF |
| PQP86_RS04855 (997287) | 997287..998405 | + | 1119 | WP_000612171.1 | hypothetical protein | VF |
| PQP86_RS04860 (998430) | 998430..1000487 | + | 2058 | WP_000927220.1 | hypothetical protein | VF |
| PQP86_RS04865 (1000511) | 1000511..1000918 | + | 408 | WP_001164066.1 | hypothetical protein | VF |
| PQP86_RS04870 (1000915) | 1000915..1002210 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| PQP86_RS04875 (1002188) | 1002188..1002631 | + | 444 | WP_000555884.1 | SPI-1 type III secretion system protein SpaM | - |
| PQP86_RS04880 (1002631) | 1002631..1003641 | + | 1011 | WP_000503111.1 | SPI-1 type III secretion system protein SpaN | - |
| PQP86_RS04885 (1003641) | 1003641..1004552 | + | 912 | WP_000058741.1 | SPI-1 type III secretion system protein SpaO | - |
| PQP86_RS04890 (1004542) | 1004542..1005216 | + | 675 | WP_000526014.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| PQP86_RS04895 (1005242) | 1005242..1005502 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0.01 |