MGE detailed information
MGE type: Genomic_island MGE length: 10413 bp
Accession: NZ_CP117394 Location: 990400..1000812 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM017 Replicon: chromosome
Accession: NZ_CP117394 Location: 990400..1000812 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM017 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP77_RS04780 (986824) | 986824..987221 | + | 398 | Protein_935 | cytoplasmic protein | - |
| PQP77_RS04785 (987412) | 987412..987600 | + | 189 | Protein_936 | hypothetical protein | - |
| PQP77_RS04790 (987808) | 987808..988476 | + | 669 | WP_000445914.1 | hypothetical protein | - |
| PQP77_RS04795 (988503) | 988503..988997 | + | 495 | WP_000424948.1 | hypothetical protein | - |
| PQP77_RS04800 (989242) | 989242..989898 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| PQP77_RS04805 (990131) | 990131..990540 | + | 410 | Protein_940 | IS5/IS1182 family transposase | - |
| PQP77_RS04810 (990613) | 990613..991140 | - | 528 | WP_000971658.1 | GNAT family N-acetyltransferase | Toxin Detail |
| PQP77_RS04815 (991137) | 991137..991427 | - | 291 | WP_000855694.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| PQP77_RS04820 (991697) | 991697..991897 | - | 201 | Protein_943 | IS3 family transposase | - |
| PQP77_RS04825 (992138) | 992138..992464 | + | 327 | WP_000393305.1 | hypothetical protein | - |
| PQP77_RS04830 (992737) | 992737..993084 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| PQP77_RS04835 (993069) | 993069..993518 | - | 450 | WP_000381612.1 | membrane protein | - |
| PQP77_RS04840 (993950) | 993950..994393 | - | 444 | WP_079798511.1 | Type 3 secretion system pilotin | VF |
| PQP77_RS04845 (994849) | 994849..995499 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| PQP77_RS04850 (995496) | 995496..997184 | + | 1689 | WP_000848102.1 | Type 3 secretion system secretin | VF |
| PQP77_RS04855 (997181) | 997181..998299 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| PQP77_RS04860 (998324) | 998324..1000381 | + | 2058 | WP_000927220.1 | Invasion protein InvA | VF |
| PQP77_RS04865 (1000405) | 1000405..1000812 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| PQP77_RS04870 (1000809) | 1000809..1002104 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| PQP77_RS04875 (1002082) | 1002082..1002525 | + | 444 | WP_000555884.1 | SPI-1 type III secretion system protein SpaM | - |
| PQP77_RS04880 (1002525) | 1002525..1003535 | + | 1011 | WP_000503111.1 | SPI-1 type III secretion system protein SpaN | - |
| PQP77_RS04885 (1003535) | 1003535..1004446 | + | 912 | WP_000058741.1 | SPI-1 type III secretion system protein SpaO | - |
| PQP77_RS04890 (1004436) | 1004436..1005110 | + | 675 | WP_000526014.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| PQP77_RS04895 (1005136) | 1005136..1005396 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0.01 |