MGE detailed information
MGE type: Genomic_island MGE length: 10413 bp
Accession: NZ_CP117390 Location: 990575..1000987 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM008 Replicon: chromosome
Accession: NZ_CP117390 Location: 990575..1000987 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM008 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP88_RS04780 (986999) | 986999..987396 | + | 398 | Protein_935 | cytoplasmic protein | - |
| PQP88_RS04785 (987587) | 987587..987775 | + | 189 | Protein_936 | hypothetical protein | - |
| PQP88_RS04790 (987983) | 987983..988651 | + | 669 | WP_000445914.1 | hypothetical protein | - |
| PQP88_RS04795 (988678) | 988678..989172 | + | 495 | WP_000424948.1 | hypothetical protein | - |
| PQP88_RS04800 (989417) | 989417..990073 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| PQP88_RS04805 (990306) | 990306..990715 | + | 410 | Protein_940 | IS5/IS1182 family transposase | - |
| PQP88_RS04810 (990788) | 990788..991315 | - | 528 | WP_000971658.1 | GNAT family N-acetyltransferase | Toxin Detail |
| PQP88_RS04815 (991312) | 991312..991602 | - | 291 | WP_000855694.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| PQP88_RS04820 (991872) | 991872..992072 | - | 201 | Protein_943 | IS3 family transposase | - |
| PQP88_RS04825 (992313) | 992313..992639 | + | 327 | WP_000393305.1 | hypothetical protein | - |
| PQP88_RS04830 (992912) | 992912..993259 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| PQP88_RS04835 (993244) | 993244..993693 | - | 450 | WP_000381612.1 | membrane protein | - |
| PQP88_RS04840 (994125) | 994125..994568 | - | 444 | WP_079798511.1 | hypothetical protein | VF |
| PQP88_RS04845 (995024) | 995024..995674 | + | 651 | WP_001674874.1 | hypothetical protein | VF |
| PQP88_RS04850 (995671) | 995671..997359 | + | 1689 | WP_000848102.1 | hypothetical protein | VF |
| PQP88_RS04855 (997356) | 997356..998474 | + | 1119 | WP_000612171.1 | hypothetical protein | VF |
| PQP88_RS04860 (998499) | 998499..1000556 | + | 2058 | WP_000927220.1 | hypothetical protein | VF |
| PQP88_RS04865 (1000580) | 1000580..1000987 | + | 408 | WP_001164066.1 | hypothetical protein | VF |
| PQP88_RS04870 (1000984) | 1000984..1002279 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| PQP88_RS04875 (1002257) | 1002257..1002699 | + | 443 | Protein_954 | SPI-1 type III secretion system protein SpaM | - |
| PQP88_RS04880 (1002699) | 1002699..1003709 | + | 1011 | WP_000503111.1 | SPI-1 type III secretion system protein SpaN | - |
| PQP88_RS04885 (1003709) | 1003709..1004620 | + | 912 | WP_000058741.1 | SPI-1 type III secretion system protein SpaO | - |
| PQP88_RS04890 (1004610) | 1004610..1005284 | + | 675 | WP_000526014.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| PQP88_RS04895 (1005310) | 1005310..1005570 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0.01 |