MGE detailed information
MGE type: Genomic_island MGE length: 29340 bp
Accession: NZ_CP117390 Location: 3625471..3654810 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM008 Replicon: chromosome
Accession: NZ_CP117390 Location: 3625471..3654810 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM008 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP88_RS17785 () | 3621042..3623486 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| PQP88_RS17790 () | 3623595..3624362 | + | 768 | WP_274890425.1 | amidohydrolase | - |
| PQP88_RS17795 () | 3624733..3625140 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| PQP88_RS17800 () | 3625471..3626190 | + | 720 | WP_000787601.1 | hypothetical protein | VF |
| PQP88_RS17805 () | 3626194..3626382 | - | 189 | WP_079798499.1 | hypothetical protein | - |
| PQP88_RS17810 () | 3626437..3626549 | + | 113 | Protein_3484 | hypothetical protein | - |
| PQP88_RS17815 () | 3627151..3627768 | - | 618 | WP_000241748.1 | protein TioA | - |
| PQP88_RS17820 () | 3627908..3628363 | - | 456 | WP_000141548.1 | Lrp/AsnC family transcriptional regulator | - |
| PQP88_RS17825 () | 3628496..3629575 | - | 1080 | WP_000791814.1 | fimbrial protein TcfD | - |
| PQP88_RS17830 () | 3629597..3632284 | - | 2688 | WP_001651570.1 | hypothetical protein | VF |
| PQP88_RS17835 () | 3632393..3632911 | - | 519 | WP_274890426.1 | hypothetical protein | VF |
| PQP88_RS17840 () | 3633019..3633729 | - | 711 | WP_001009507.1 | hypothetical protein | VF |
| PQP88_RS17845 () | 3634765..3635322 | + | 558 | Protein_3491 | IS21 family transposase ISEc62 | Transposase |
| PQP88_RS17850 () | 3635362..3635548 | - | 187 | Protein_3492 | transposase | - |
| PQP88_RS17855 () | 3635629..3635748 | - | 120 | Protein_3493 | hypothetical protein | - |
| PQP88_RS17860 () | 3635868..3636815 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| PQP88_RS17865 () | 3637309..3637549 | - | 241 | Protein_3495 | PerC family transcriptional regulator | - |
| PQP88_RS17870 () | 3637632..3638453 | - | 822 | WP_000119391.1 | polysaccharide deacetylase family protein | - |
| PQP88_RS17875 () | 3638859..3639329 | - | 471 | WP_000266947.1 | AfaD family invasin | - |
| PQP88_RS17880 () | 3639351..3641861 | - | 2511 | WP_000669316.1 | hypothetical protein | VF |
| PQP88_RS17885 () | 3641885..3642622 | - | 738 | WP_001750707.1 | hypothetical protein | VF |
| PQP88_RS17890 () | 3642699..3643196 | - | 498 | WP_001750706.1 | Saf-pilin pilus formation protein SafA | - |
| PQP88_RS17895 () | 3643957..3644661 | - | 705 | Protein_3501 | integrase core domain-containing protein | - |
| PQP88_RS17900 () | 3644714..3644962 | + | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| PQP88_RS17905 () | 3645094..3645372 | - | 279 | WP_079798501.1 | hypothetical protein | - |
| PQP88_RS17910 () | 3645455..3645571 | - | 117 | WP_227457392.1 | hypothetical protein | - |
| PQP88_RS17915 () | 3645813..3646070 | + | 258 | WP_079798500.1 | SymE family type I addiction module toxin | Toxin Detail |
| PQP88_RS17920 () | 3646161..3646538 | - | 378 | WP_000739707.1 | Imm8 family immunity protein | - |
| PQP88_RS17925 () | 3647271..3647636 | - | 366 | WP_001231281.1 | hypothetical protein | - |
| PQP88_RS17930 () | 3647602..3648948 | - | 1347 | Protein_3508 | hypothetical protein | VF |
| PQP88_RS17935 () | 3649010..3649267 | + | 258 | WP_000994229.1 | SymE family type I addiction module toxin | Toxin Detail |
| PQP88_RS17940 () | 3649331..3649669 | - | 339 | WP_000382983.1 | hypothetical protein | - |
| PQP88_RS17945 () | 3650040..3651080 | - | 1041 | Protein_3511 | hypothetical protein | VF |
| - | 3651049..3651317 | - | 269 | - | - | Antitoxin Detail |
| PQP88_RS17950 () | 3651142..3651399 | + | 258 | WP_000994229.1 | SymE family type I addiction module toxin | Toxin Detail |
| PQP88_RS17955 () | 3651463..3651801 | - | 339 | WP_000382983.1 | hypothetical protein | - |
| PQP88_RS17960 () | 3652172..3653929 | - | 1758 | Protein_3514 | RHS repeat domain-containing protein | - |
| PQP88_RS17965 () | 3654134..3654367 | + | 234 | WP_000035941.1 | hypothetical protein | - |
| PQP88_RS17970 () | 3654439..3654786 | - | 348 | WP_000887296.1 | hypothetical protein | - |
| PQP88_RS17975 () | 3654821..3659500 | - | 4680 | WP_162803795.1 | RHS repeat-associated core domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|