MGE detailed information
MGE type: Genomic_island MGE length: 29342 bp
Accession: NZ_CP117388 Location: 3665026..3694367 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM010 Replicon: chromosome
Accession: NZ_CP117388 Location: 3665026..3694367 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM010 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ04_RS18105 () | 3660597..3663041 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| PQQ04_RS18110 () | 3663150..3663917 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| PQQ04_RS18115 () | 3664288..3664695 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| PQQ04_RS18120 () | 3665026..3665745 | + | 720 | WP_000787601.1 | Outer membrane protein PagN | VF |
| PQQ04_RS18125 () | 3665749..3665937 | - | 189 | WP_079798499.1 | hypothetical protein | - |
| PQQ04_RS18130 () | 3665973..3666106 | + | 134 | Protein_3546 | transposase | - |
| PQQ04_RS18135 () | 3666708..3667325 | - | 618 | WP_000241748.1 | protein TioA | - |
| PQQ04_RS18140 () | 3667465..3667920 | - | 456 | WP_000141548.1 | Lrp/AsnC family transcriptional regulator | - |
| PQQ04_RS18145 () | 3668053..3669132 | - | 1080 | WP_000791814.1 | fimbrial protein TcfD | - |
| PQQ04_RS18150 () | 3669154..3671841 | - | 2688 | WP_001651570.1 | hypothetical protein | VF |
| PQQ04_RS18155 () | 3671950..3672468 | - | 519 | WP_001056553.1 | CFA/I fimbrial subunit B | VF |
| PQQ04_RS18160 () | 3672576..3673286 | - | 711 | WP_001009507.1 | hypothetical protein | VF |
| PQQ04_RS18165 () | 3674322..3674879 | + | 558 | Protein_3553 | IS21 family transposase ISEc62 | Transposase |
| PQQ04_RS18170 () | 3674919..3675105 | - | 187 | Protein_3554 | transposase | - |
| PQQ04_RS18175 () | 3675186..3675305 | - | 120 | Protein_3555 | hypothetical protein | - |
| PQQ04_RS18180 () | 3675425..3676372 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| PQQ04_RS18185 () | 3676866..3677106 | - | 241 | Protein_3557 | PerC family transcriptional regulator | - |
| PQQ04_RS18190 () | 3677189..3678010 | - | 822 | WP_000119391.1 | polysaccharide deacetylase family protein | - |
| PQQ04_RS18195 () | 3678416..3678886 | - | 471 | WP_000266947.1 | AfaD family invasin | - |
| PQQ04_RS18200 () | 3678908..3681418 | - | 2511 | WP_000669316.1 | F1 capsule-anchoring protein | VF |
| PQQ04_RS18205 () | 3681442..3682179 | - | 738 | WP_001750707.1 | Chaperone protein caf1M | VF |
| PQQ04_RS18210 () | 3682256..3682753 | - | 498 | WP_001750706.1 | Saf-pilin pilus formation protein SafA | - |
| PQQ04_RS18215 () | 3683514..3684218 | - | 705 | Protein_3563 | integrase core domain-containing protein | - |
| PQQ04_RS18220 () | 3684271..3684519 | + | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| PQQ04_RS18225 () | 3684651..3684929 | - | 279 | WP_079798501.1 | hypothetical protein | - |
| PQQ04_RS18230 () | 3685012..3685128 | - | 117 | WP_227457392.1 | hypothetical protein | - |
| PQQ04_RS18235 () | 3685370..3685627 | + | 258 | WP_079798500.1 | SymE family type I addiction module toxin | Toxin Detail |
| PQQ04_RS18240 () | 3685718..3686095 | - | 378 | WP_000739707.1 | Imm8 family immunity protein | - |
| PQQ04_RS18245 () | 3686828..3687193 | - | 366 | WP_001231281.1 | hypothetical protein | - |
| PQQ04_RS18250 () | 3687159..3688505 | - | 1347 | Protein_3570 | hypothetical protein | VF |
| PQQ04_RS18255 () | 3688567..3688824 | + | 258 | WP_000994229.1 | SymE family type I addiction module toxin | Toxin Detail |
| PQQ04_RS18260 () | 3688888..3689226 | - | 339 | WP_000382983.1 | hypothetical protein | - |
| PQQ04_RS18265 () | 3689597..3690637 | - | 1041 | Protein_3573 | hypothetical protein | VF |
| - | 3690606..3690874 | - | 269 | - | - | Antitoxin Detail |
| PQQ04_RS18270 () | 3690699..3690956 | + | 258 | WP_000994229.1 | SymE family type I addiction module toxin | Toxin Detail |
| PQQ04_RS18275 () | 3691020..3691358 | - | 339 | WP_000382983.1 | hypothetical protein | - |
| PQQ04_RS18280 () | 3691729..3693486 | - | 1758 | Protein_3576 | RHS repeat domain-containing protein | - |
| PQQ04_RS18285 () | 3693691..3693924 | + | 234 | WP_000035941.1 | hypothetical protein | - |
| PQQ04_RS18290 () | 3693996..3694343 | - | 348 | WP_000887296.1 | hypothetical protein | - |
| PQQ04_RS18295 () | 3694378..3699057 | - | 4680 | WP_162803795.1 | RHS repeat-associated core domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|