MGE detailed information
MGE type: Genomic_island MGE length: 10413 bp
Accession: NZ_CP117386 Location: 990505..1000917 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM011 Replicon: chromosome
Accession: NZ_CP117386 Location: 990505..1000917 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM011 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP90_RS04785 (986929) | 986929..987326 | + | 398 | Protein_936 | cytoplasmic protein | - |
| PQP90_RS04790 (987517) | 987517..987705 | + | 189 | Protein_937 | hypothetical protein | - |
| PQP90_RS04795 (987913) | 987913..988581 | + | 669 | WP_000445914.1 | hypothetical protein | - |
| PQP90_RS04800 (988608) | 988608..989102 | + | 495 | WP_000424948.1 | hypothetical protein | - |
| PQP90_RS04805 (989347) | 989347..990003 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| PQP90_RS04810 (990236) | 990236..990645 | + | 410 | Protein_941 | IS5/IS1182 family transposase | - |
| PQP90_RS04815 (990718) | 990718..991245 | - | 528 | WP_000971658.1 | GNAT family N-acetyltransferase | Toxin Detail |
| PQP90_RS04820 (991242) | 991242..991532 | - | 291 | WP_000855694.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| PQP90_RS04825 (991802) | 991802..992002 | - | 201 | Protein_944 | IS3 family transposase | - |
| PQP90_RS04830 (992243) | 992243..992569 | + | 327 | WP_000393305.1 | hypothetical protein | - |
| PQP90_RS04835 (992842) | 992842..993189 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| PQP90_RS04840 (993174) | 993174..993623 | - | 450 | WP_000381612.1 | membrane protein | - |
| PQP90_RS04845 (994055) | 994055..994498 | - | 444 | WP_079798511.1 | Ribosomal RNA small subunit methyltransferase C | VF |
| PQP90_RS04850 (994954) | 994954..995604 | + | 651 | WP_001674874.1 | D-aminoacyl-tRNA deacylase | VF |
| PQP90_RS04855 (995601) | 995601..997289 | + | 1689 | WP_000848102.1 | RNA polymerase sigma factor SigB | VF |
| PQP90_RS04860 (997286) | 997286..998404 | + | 1119 | WP_000612171.1 | Diphtheria toxin repressor | VF |
| PQP90_RS04865 (998429) | 998429..1000486 | + | 2058 | WP_000927220.1 | UDP-glucose 4-epimerase | VF |
| PQP90_RS04870 (1000510) | 1000510..1000917 | + | 408 | WP_001164066.1 | hypothetical protein | VF |
| PQP90_RS04875 (1000914) | 1000914..1002209 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| PQP90_RS04880 (1002187) | 1002187..1002630 | + | 444 | WP_000555884.1 | SPI-1 type III secretion system protein SpaM | - |
| PQP90_RS04885 (1002630) | 1002630..1003640 | + | 1011 | WP_274897714.1 | SPI-1 type III secretion system protein SpaN | - |
| PQP90_RS04890 (1003640) | 1003640..1004551 | + | 912 | Protein_957 | SPI-1 type III secretion system protein SpaO | - |
| PQP90_RS04895 (1004541) | 1004541..1005215 | + | 675 | WP_000526014.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| PQP90_RS04900 (1005241) | 1005241..1005501 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0.01 |