MGE detailed information
MGE type: Genomic_island MGE length: 10413 bp
Accession: NZ_CP117382 Location: 990351..1000763 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM018 Replicon: chromosome
Accession: NZ_CP117382 Location: 990351..1000763 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM018 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP98_RS04775 (986775) | 986775..987172 | + | 398 | Protein_934 | cytoplasmic protein | - |
| PQP98_RS04780 (987363) | 987363..987551 | + | 189 | Protein_935 | hypothetical protein | - |
| PQP98_RS04785 (987759) | 987759..988427 | + | 669 | WP_000445914.1 | hypothetical protein | - |
| PQP98_RS04790 (988454) | 988454..988948 | + | 495 | WP_000424948.1 | hypothetical protein | - |
| PQP98_RS04795 (989193) | 989193..989849 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| PQP98_RS04800 (990082) | 990082..990491 | + | 410 | Protein_939 | IS5/IS1182 family transposase | - |
| PQP98_RS04805 (990564) | 990564..991091 | - | 528 | WP_000971658.1 | GNAT family N-acetyltransferase | Toxin Detail |
| PQP98_RS04810 (991088) | 991088..991378 | - | 291 | WP_000855694.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| PQP98_RS04815 (991648) | 991648..991848 | - | 201 | Protein_942 | IS3 family transposase | - |
| PQP98_RS04820 (992089) | 992089..992415 | + | 327 | WP_000393305.1 | hypothetical protein | - |
| PQP98_RS04825 (992688) | 992688..993035 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| PQP98_RS04830 (993020) | 993020..993469 | - | 450 | WP_000381612.1 | membrane protein | - |
| PQP98_RS04835 (993901) | 993901..994344 | - | 444 | WP_079798511.1 | hypothetical protein | VF |
| PQP98_RS04840 (994800) | 994800..995450 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| PQP98_RS04845 (995447) | 995447..997135 | + | 1689 | WP_000848102.1 | Protein InvG | VF |
| PQP98_RS04850 (997132) | 997132..998250 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| PQP98_RS04855 (998275) | 998275..1000332 | + | 2058 | WP_000927220.1 | Invasion protein InvA | VF |
| PQP98_RS04860 (1000356) | 1000356..1000763 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| PQP98_RS04865 (1000760) | 1000760..1002055 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| PQP98_RS04870 (1002033) | 1002033..1002476 | + | 444 | WP_000555884.1 | SPI-1 type III secretion system protein SpaM | - |
| PQP98_RS04875 (1002476) | 1002476..1003486 | + | 1011 | WP_000503111.1 | SPI-1 type III secretion system protein SpaN | - |
| PQP98_RS04880 (1003486) | 1003486..1004397 | + | 912 | WP_274877772.1 | SPI-1 type III secretion system protein SpaO | - |
| PQP98_RS04885 (1004387) | 1004387..1005061 | + | 675 | WP_000526014.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| PQP98_RS04890 (1005087) | 1005087..1005347 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0.01 |