MGE detailed information
MGE type: Genomic_island MGE length: 12086 bp
Accession: NZ_CP117370 Location: 2464738..2476823 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain RM054 Replicon: chromosome
Accession: NZ_CP117370 Location: 2464738..2476823 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain RM054 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP97_RS12140 (2460659) | 2460659..2461861 | - | 1203 | WP_000347159.1 | MalY/PatB family protein | - |
| PQP97_RS12145 (2461874) | 2461874..2463325 | - | 1452 | WP_001276616.1 | Na+/H+ antiporter NhaC | - |
| PQP97_RS12150 (2463469) | 2463469..2464476 | - | 1008 | WP_000201080.1 | LacI family DNA-binding transcriptional regulator | - |
| PQP97_RS12155 (2464735) | 2464735..2466201 | + | 1467 | WP_000987828.1 | hypothetical protein | - |
| PQP97_RS12160 (2467009) | 2467009..2467723 | + | 715 | Protein_2379 | helix-turn-helix domain-containing protein | - |
| PQP97_RS12165 (2467779) | 2467779..2468687 | - | 909 | WP_010989018.1 | hypothetical protein | - |
| PQP97_RS12170 (2468830) | 2468830..2469162 | - | 333 | WP_000253154.1 | DUF1493 family protein | - |
| PQP97_RS12175 (2469152) | 2469152..2469367 | - | 216 | WP_000206207.1 | hypothetical protein | - |
| PQP97_RS12180 (2469519) | 2469519..2469767 | + | 249 | WP_000885424.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PQP97_RS12185 (2469757) | 2469757..2470041 | + | 285 | WP_000221343.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PQP97_RS12190 (2470212) | 2470212..2470601 | + | 390 | WP_000194089.1 | RidA family protein | - |
| PQP97_RS12195 (2470653) | 2470653..2471732 | - | 1080 | WP_000954688.1 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | - |
| PQP97_RS12200 (2471925) | 2471925..2472413 | - | 489 | WP_001293638.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| PQP97_RS12205 (2472458) | 2472458..2473966 | + | 1509 | WP_000199411.1 | FAD-dependent oxidoreductase | - |
| PQP97_RS12210 (2473956) | 2473956..2475197 | + | 1242 | WP_001095738.1 | MFS transporter | - |
| PQP97_RS12215 (2475267) | 2475267..2476823 | + | 1557 | WP_000476912.1 | PhoPQ-activated pathogenicity-related family protein | - |
| PQP97_RS12220 (2477000) | 2477000..2478286 | + | 1287 | WP_000824240.1 | MFS transporter | - |
| PQP97_RS12225 (2478261) | 2478261..2479286 | + | 1026 | WP_000864924.1 | zinc-binding alcohol dehydrogenase family protein | - |
| PQP97_RS12230 (2479345) | 2479345..2480136 | - | 792 | WP_001518759.1 | FadR/GntR family transcriptional regulator | - |
| PQP97_RS12235 (2480182) | 2480182..2481273 | - | 1092 | WP_000976498.1 | linear amide C-N hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297233 | UFRD01000002 | 1156436..1168519 | 0 |