MGE detailed information
MGE type: Genomic_island MGE length: 10427 bp
Accession: NZ_CP117370 Location: 1027784..1038210 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain RM054 Replicon: chromosome
Accession: NZ_CP117370 Location: 1027784..1038210 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain RM054 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP97_RS04935 (1022897) | 1022897..1023277 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| PQP97_RS04940 (1023333) | 1023333..1025900 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| PQP97_RS04945 (1026059) | 1026059..1026580 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| PQP97_RS04950 (1026752) | 1026752..1027408 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| PQP97_RS04955 (1027755) | 1027755..1027960 | + | 206 | Protein_972 | IS5 family transposase ISEcl3 | Transposase |
| PQP97_RS04960 (1028033) | 1028033..1028560 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| PQP97_RS04965 (1028557) | 1028557..1028847 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| PQP97_RS04970 (1029117) | 1029117..1029295 | - | 179 | Protein_975 | IS3 family transposase | - |
| PQP97_RS04975 (1029536) | 1029536..1029862 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| PQP97_RS04980 (1030135) | 1030135..1030482 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| PQP97_RS04985 (1030467) | 1030467..1030916 | - | 450 | WP_000381610.1 | membrane protein | - |
| PQP97_RS04990 (1031347) | 1031347..1031790 | - | 444 | WP_000715092.1 | hypothetical protein | VF |
| PQP97_RS04995 (1032247) | 1032247..1032897 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| PQP97_RS05000 (1032894) | 1032894..1034582 | + | 1689 | WP_000848113.1 | Protein InvG | VF |
| PQP97_RS05005 (1034579) | 1034579..1035697 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| PQP97_RS05010 (1035722) | 1035722..1037779 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| PQP97_RS05015 (1037803) | 1037803..1038210 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| PQP97_RS05020 (1038207) | 1038207..1039502 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| PQP97_RS05025 (1039480) | 1039480..1039923 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| PQP97_RS05030 (1039923) | 1039923..1040933 | + | 1011 | WP_000503098.1 | SPI-1 type III secretion system protein SpaN | - |
| PQP97_RS05035 (1040933) | 1040933..1041844 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| PQP97_RS05040 (1041834) | 1041834..1042508 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| PQP97_RS05045 (1042534) | 1042534..1042794 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0 |