MGE detailed information
MGE type: Genomic_island MGE length: 12083 bp
Accession: NZ_CP117357 Location: 2462963..2475045 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain RM096 Replicon: chromosome
Accession: NZ_CP117357 Location: 2462963..2475045 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain RM096 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ15_RS12095 (2458884) | 2458884..2460086 | - | 1203 | WP_000347159.1 | MalY/PatB family protein | - |
| PQQ15_RS12100 (2460099) | 2460099..2461550 | - | 1452 | WP_001276616.1 | Na+/H+ antiporter NhaC | - |
| PQQ15_RS12105 (2461694) | 2461694..2462701 | - | 1008 | WP_000201080.1 | LacI family DNA-binding transcriptional regulator | - |
| PQQ15_RS12110 (2462960) | 2462960..2464424 | + | 1465 | Protein_2368 | hypothetical protein | - |
| PQQ15_RS12115 (2465232) | 2465232..2465946 | + | 715 | Protein_2369 | helix-turn-helix domain-containing protein | - |
| PQQ15_RS12120 (2466002) | 2466002..2466910 | - | 909 | WP_010989018.1 | hypothetical protein | - |
| PQQ15_RS12125 (2467053) | 2467053..2467385 | - | 333 | WP_000253154.1 | DUF1493 family protein | - |
| PQQ15_RS12130 (2467375) | 2467375..2467590 | - | 216 | WP_000206207.1 | hypothetical protein | - |
| PQQ15_RS12135 (2467742) | 2467742..2467990 | + | 249 | WP_000885424.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PQQ15_RS12140 (2467980) | 2467980..2468264 | + | 285 | WP_000221343.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PQQ15_RS12145 (2468435) | 2468435..2468824 | + | 390 | WP_000194089.1 | RidA family protein | - |
| PQQ15_RS12150 (2468876) | 2468876..2469955 | - | 1080 | WP_000954688.1 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | - |
| PQQ15_RS12155 (2470147) | 2470147..2470635 | - | 489 | WP_001293638.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| PQQ15_RS12160 (2470680) | 2470680..2472188 | + | 1509 | WP_000199411.1 | FAD-dependent oxidoreductase | - |
| PQQ15_RS12165 (2472178) | 2472178..2473419 | + | 1242 | WP_001095738.1 | MFS transporter | - |
| PQQ15_RS12170 (2473489) | 2473489..2475045 | + | 1557 | WP_000476912.1 | PhoPQ-activated pathogenicity-related family protein | - |
| PQQ15_RS12175 (2475222) | 2475222..2476508 | + | 1287 | WP_000824240.1 | MFS transporter | - |
| PQQ15_RS12180 (2476483) | 2476483..2477507 | + | 1025 | Protein_2382 | zinc-binding alcohol dehydrogenase family protein | - |
| PQQ15_RS12185 (2477566) | 2477566..2478357 | - | 792 | WP_001518759.1 | FadR/GntR family transcriptional regulator | - |
| PQQ15_RS12190 (2478403) | 2478403..2479494 | - | 1092 | WP_000976498.1 | linear amide C-N hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297233 | UFRD01000002 | 1156436..1168519 | 0.001 |