MGE detailed information
MGE type: Genomic_island MGE length: 10427 bp
Accession: NZ_CP117357 Location: 1025190..1035616 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain RM096 Replicon: chromosome
Accession: NZ_CP117357 Location: 1025190..1035616 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain RM096 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ15_RS04960 (1020303) | 1020303..1020683 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| PQQ15_RS04965 (1020739) | 1020739..1023306 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| PQQ15_RS04970 (1023465) | 1023465..1023986 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| PQQ15_RS04975 (1024158) | 1024158..1024814 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| PQQ15_RS04980 (1025161) | 1025161..1025366 | + | 206 | Protein_976 | IS5 family transposase ISEcl3 | Transposase |
| PQQ15_RS04985 (1025439) | 1025439..1025966 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| PQQ15_RS04990 (1025963) | 1025963..1026253 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| PQQ15_RS04995 (1026523) | 1026523..1026701 | - | 179 | Protein_979 | IS3 family transposase | - |
| PQQ15_RS05000 (1026942) | 1026942..1027268 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| PQQ15_RS05005 (1027541) | 1027541..1027888 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| PQQ15_RS05010 (1027873) | 1027873..1028322 | - | 450 | WP_000381610.1 | membrane protein | - |
| PQQ15_RS05015 (1028753) | 1028753..1029196 | - | 444 | WP_000715092.1 | Type 3 secretion system pilotin | VF |
| PQQ15_RS05020 (1029653) | 1029653..1030303 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| PQQ15_RS05025 (1030300) | 1030300..1031988 | + | 1689 | WP_000848113.1 | Type 3 secretion system secretin | VF |
| PQQ15_RS05030 (1031985) | 1031985..1033103 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| PQQ15_RS05035 (1033128) | 1033128..1035185 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| PQQ15_RS05040 (1035209) | 1035209..1035616 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| PQQ15_RS05045 (1035613) | 1035613..1036908 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| PQQ15_RS05050 (1036886) | 1036886..1037329 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| PQQ15_RS05055 (1037329) | 1037329..1038339 | + | 1011 | WP_000503098.1 | SPI-1 type III secretion system protein SpaN | - |
| PQQ15_RS05060 (1038339) | 1038339..1039250 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| PQQ15_RS05065 (1039240) | 1039240..1039914 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| PQQ15_RS05070 (1039940) | 1039940..1040200 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0 |