MGE detailed information
MGE type: Genomic_island MGE length: 10392 bp
Accession: NZ_CP117348 Location: 1022679..1033070 Organism: Salmonella enterica subsp. enterica serovar Heidelberg strain RM101 Replicon: chromosome
Accession: NZ_CP117348 Location: 1022679..1033070 Organism: Salmonella enterica subsp. enterica serovar Heidelberg strain RM101 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ11_RS04920 (1018102) | 1018102..1020669 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| PQQ11_RS04925 (1020828) | 1020828..1021349 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| PQQ11_RS04930 (1021521) | 1021521..1022177 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| PQQ11_RS04935 (1022410) | 1022410..1022819 | + | 410 | Protein_968 | IS5/IS1182 family transposase | - |
| PQQ11_RS04940 (1022892) | 1022892..1023419 | - | 528 | WP_000971648.1 | GNAT family N-acetyltransferase | Toxin Detail |
| PQQ11_RS04945 (1023416) | 1023416..1023706 | - | 291 | WP_000855694.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| PQQ11_RS04950 (1023976) | 1023976..1024154 | - | 179 | Protein_971 | IS3 family transposase | - |
| PQQ11_RS04955 (1024395) | 1024395..1024721 | + | 327 | WP_000393301.1 | hypothetical protein | - |
| PQQ11_RS04960 (1024994) | 1024994..1025341 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| PQQ11_RS04965 (1025326) | 1025326..1025775 | - | 450 | WP_000381611.1 | hypothetical protein | - |
| PQQ11_RS04970 (1026207) | 1026207..1026650 | - | 444 | WP_000715096.1 | Type 3 secretion system pilotin | VF |
| PQQ11_RS04975 (1027107) | 1027107..1027757 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| PQQ11_RS04980 (1027754) | 1027754..1029442 | + | 1689 | WP_000848099.1 | Type 3 secretion system secretin | VF |
| PQQ11_RS04985 (1029439) | 1029439..1030557 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| PQQ11_RS04990 (1030582) | 1030582..1032639 | + | 2058 | WP_000927220.1 | Invasion protein InvA | VF |
| PQQ11_RS04995 (1032663) | 1032663..1033070 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| PQQ11_RS05000 (1033067) | 1033067..1034362 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| PQQ11_RS05005 (1034340) | 1034340..1034783 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| PQQ11_RS05010 (1034783) | 1034783..1035793 | + | 1011 | WP_274898119.1 | SPI-1 type III secretion system protein SpaN | - |
| PQQ11_RS05015 (1035793) | 1035793..1036703 | + | 911 | Protein_984 | SPI-1 type III secretion system protein SpaO | - |
| PQQ11_RS05020 (1036693) | 1036693..1037367 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| PQQ11_RS05025 (1037393) | 1037393..1037653 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0.008 |