MGE detailed information
MGE type: Genomic_island MGE length: 10427 bp
Accession: NZ_CP117338 Location: 995732..1006158 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain RM095 Replicon: chromosome
Accession: NZ_CP117338 Location: 995732..1006158 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain RM095 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP94_RS04740 (990845) | 990845..991225 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| PQP94_RS04745 (991281) | 991281..993848 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| PQP94_RS04750 (994007) | 994007..994528 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| PQP94_RS04755 (994700) | 994700..995356 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| PQP94_RS04760 (995703) | 995703..995908 | + | 206 | Protein_933 | IS5 family transposase ISEcl3 | Transposase |
| PQP94_RS04765 (995981) | 995981..996508 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| PQP94_RS04770 (996505) | 996505..996795 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| PQP94_RS04775 (997065) | 997065..997243 | - | 179 | Protein_936 | IS3 family transposase | - |
| PQP94_RS04780 (997484) | 997484..997810 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| PQP94_RS04785 (998083) | 998083..998430 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| PQP94_RS04790 (998415) | 998415..998864 | - | 450 | WP_000381610.1 | membrane protein | - |
| PQP94_RS04795 (999295) | 999295..999738 | - | 444 | WP_000715092.1 | hypothetical protein | VF |
| PQP94_RS04800 (1000195) | 1000195..1000845 | + | 651 | WP_001674874.1 | hypothetical protein | VF |
| PQP94_RS04805 (1000842) | 1000842..1002530 | + | 1689 | WP_000848113.1 | hypothetical protein | VF |
| PQP94_RS04810 (1002527) | 1002527..1003645 | + | 1119 | WP_000612171.1 | ATP-dependent DNA helicase PcrA | VF |
| PQP94_RS04815 (1003670) | 1003670..1005727 | + | 2058 | WP_000927219.1 | DNA ligase | VF |
| PQP94_RS04820 (1005751) | 1005751..1006158 | + | 408 | WP_001164066.1 | hypothetical protein | VF |
| PQP94_RS04825 (1006155) | 1006155..1007450 | + | 1296 | WP_274895870.1 | SctN family type III secretion system ATPase InvC | - |
| PQP94_RS04830 (1007428) | 1007428..1007871 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| PQP94_RS04835 (1007871) | 1007871..1008881 | + | 1011 | Protein_948 | SPI-1 type III secretion system protein SpaN | - |
| PQP94_RS04840 (1008881) | 1008881..1009792 | + | 912 | WP_274895871.1 | SPI-1 type III secretion system protein SpaO | - |
| PQP94_RS04845 (1009782) | 1009782..1010456 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| PQP94_RS04850 (1010482) | 1010482..1010742 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0 |