MGE detailed information
MGE type: Genomic_island MGE length: 12086 bp
Accession: NZ_CP117338 Location: 2381184..2393269 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain RM095 Replicon: chromosome
Accession: NZ_CP117338 Location: 2381184..2393269 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain RM095 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP94_RS11515 (2377105) | 2377105..2378307 | - | 1203 | WP_000347159.1 | MalY/PatB family protein | - |
| PQP94_RS11520 (2378320) | 2378320..2379771 | - | 1452 | WP_001276616.1 | Na+/H+ antiporter NhaC | - |
| PQP94_RS11525 (2379915) | 2379915..2380922 | - | 1008 | Protein_2252 | LacI family DNA-binding transcriptional regulator | - |
| PQP94_RS11530 (2381181) | 2381181..2382647 | + | 1467 | WP_000987828.1 | hypothetical protein | - |
| PQP94_RS11535 (2383455) | 2383455..2384169 | + | 715 | Protein_2254 | helix-turn-helix domain-containing protein | - |
| PQP94_RS11540 (2384225) | 2384225..2385133 | - | 909 | WP_010989018.1 | hypothetical protein | - |
| PQP94_RS11545 (2385276) | 2385276..2385608 | - | 333 | WP_000253154.1 | DUF1493 family protein | - |
| PQP94_RS11550 (2385598) | 2385598..2385813 | - | 216 | WP_000206207.1 | hypothetical protein | - |
| PQP94_RS11555 (2385965) | 2385965..2386213 | + | 249 | WP_000885424.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PQP94_RS11560 (2386203) | 2386203..2386487 | + | 285 | WP_000221343.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PQP94_RS11565 (2386658) | 2386658..2387047 | + | 390 | WP_000194089.1 | RidA family protein | - |
| PQP94_RS11570 (2387099) | 2387099..2388178 | - | 1080 | WP_000954688.1 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | - |
| PQP94_RS11575 (2388371) | 2388371..2388859 | - | 489 | WP_001293638.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| PQP94_RS11580 (2388904) | 2388904..2390412 | + | 1509 | WP_000199411.1 | FAD-dependent oxidoreductase | - |
| PQP94_RS11585 (2390402) | 2390402..2391643 | + | 1242 | WP_001095738.1 | MFS transporter | - |
| PQP94_RS11590 (2391713) | 2391713..2393269 | + | 1557 | WP_000476912.1 | PhoPQ-activated pathogenicity-related family protein | - |
| PQP94_RS11595 (2393446) | 2393446..2394732 | + | 1287 | WP_000824240.1 | MFS transporter | - |
| PQP94_RS11600 (2394707) | 2394707..2395732 | + | 1026 | WP_274895951.1 | zinc-binding alcohol dehydrogenase family protein | - |
| PQP94_RS11605 (2395791) | 2395791..2396582 | - | 792 | WP_001518759.1 | FadR/GntR family transcriptional regulator | - |
| PQP94_RS11610 (2396628) | 2396628..2397719 | - | 1092 | WP_000976498.1 | linear amide C-N hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297233 | UFRD01000002 | 1156436..1168519 | 0.001 |