MGE detailed information
MGE type: Conjugative plasmid MGE length: 114639 bp
Accession: NZ_CP117328 Location: 1..114639 Organism: Salmonella enterica subsp. enterica serovar Saintpaul strain RM106 Replicon: plasmid pRM106_1
Accession: NZ_CP117328 Location: 1..114639 Organism: Salmonella enterica subsp. enterica serovar Saintpaul strain RM106 Replicon: plasmid pRM106_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP95_RS22750 (46) | 46..1077 | + | 1032 | WP_000907870.1 | plasmid replication initiator RepA | - |
| PQP95_RS22755 (2038) | 2038..2289 | + | 252 | WP_001132897.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PQP95_RS22760 (2286) | 2286..2573 | + | 288 | WP_000221869.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PQP95_RS22765 (2879) | 2879..4046 | - | 1168 | Protein_3 | IS91 family transposase | - |
| PQP95_RS22770 (4050) | 4050..4241 | - | 192 | WP_228452813.1 | transposase | - |
| PQP95_RS22775 (4391) | 4391..4573 | + | 183 | Protein_5 | helix-turn-helix domain-containing protein | - |
| PQP95_RS22780 (5605) | 5605..6333 | + | 729 | WP_000497521.1 | hypothetical protein | VF |
| PQP95_RS22785 (6398) | 6398..6898 | + | 501 | WP_000840063.1 | hypothetical protein | VF |
| PQP95_RS22790 (6937) | 6937..9573 | + | 2637 | WP_049032512.1 | TcfC E-set like domain-containing protein | - |
| PQP95_RS22795 (9681) | 9681..10715 | + | 1035 | WP_223719785.1 | hypothetical protein | - |
| PQP95_RS22800 (11290) | 11290..11865 | + | 576 | WP_023196145.1 | hypothetical protein | - |
| PQP95_RS22805 (11924) | 11924..12541 | - | 618 | WP_000521604.1 | ProQ/FINO family protein | - |
| PQP95_RS22810 (12736) | 12736..14292 | - | 1557 | WP_000818359.1 | AAA family ATPase | - |
| PQP95_RS22815 (14557) | 14557..15147 | - | 591 | WP_000194553.1 | hypothetical protein | - |
| PQP95_RS22820 (15147) | 15147..15404 | - | 258 | WP_000371887.1 | hypothetical protein | - |
| PQP95_RS22825 (15692) | 15692..16813 | + | 1122 | WP_001012502.1 | DUF3800 domain-containing protein | - |
| PQP95_RS22830 (16856) | 16856..17347 | - | 492 | WP_001090930.1 | hypothetical protein | - |
| PQP95_RS22835 (17912) | 17912..18262 | + | 351 | WP_000493380.1 | hypothetical protein | - |
| PQP95_RS22840 (18321) | 18321..19142 | + | 822 | WP_001316850.1 | hypothetical protein | - |
| PQP95_RS22845 (19142) | 19142..19921 | + | 780 | WP_000147280.1 | site-specific integrase | - |
| PQP95_RS22850 (20100) | 20100..20744 | + | 645 | WP_001144036.1 | ParA family protein | - |
| PQP95_RS22855 (20831) | 20831..21139 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| PQP95_RS22860 (21553) | 21553..22533 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| PQP95_RS22865 (22526) | 22526..22942 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| PQP95_RS22870 (22944) | 22944..24218 | - | 1275 | WP_000457492.1 | Y-family DNA polymerase | - |
| PQP95_RS22875 (24218) | 24218..24655 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| PQP95_RS22880 (24652) | 24652..24900 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| PQP95_RS22885 (25923) | 25923..26336 | + | 414 | Protein_27 | reverse transcriptase N-terminal domain-containing protein | - |
| PQP95_RS22890 (26400) | 26400..27104 | + | 705 | WP_274891467.1 | IS6-like element IS26 family transposase | - |
| PQP95_RS22895 (27153) | 27153..28358 | - | 1206 | Protein_29 | IS91 family transposase ISVsa3 | Transposase |
| PQP95_RS22900 (28569) | 28569..28793 | - | 225 | WP_000743213.1 | hypothetical protein | - |
| PQP95_RS22905 (28790) | 28790..29527 | - | 738 | WP_001366550.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| PQP95_RS22910 (30013) | 30013..30153 | - | 141 | WP_001044210.1 | hypothetical protein | - |
| PQP95_RS22915 (30159) | 30159..30863 | - | 705 | WP_274891467.1 | IS91 family transposase ISVsa3 | Transposase |
| PQP95_RS22920 (30927) | 30927..31226 | + | 300 | Protein_34 | IS91 family transposase ISVsa3 | Transposase |
| PQP95_RS22925 (31257) | 31257..32141 | + | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| PQP95_RS22930 (32358) | 32358..33572 | + | 1215 | WP_000214121.1 | Bicyclomycin resistance protein | ARG |
| PQP95_RS22935 (33600) | 33600..33905 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator HdfR | VF |
| PQP95_RS22940 (34017) | 34017..34205 | + | 189 | Protein_38 | IS91 family transposase | - |
| PQP95_RS22945 (34172) | 34172..35371 | - | 1200 | WP_274891468.1 | Tetracycline resistance protein, class C | ARG |
| PQP95_RS22950 (35477) | 35477..36127 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| PQP95_RS22955 (36159) | 36159..36401 | - | 243 | WP_000844627.1 | transposase | - |
| PQP95_RS22960 (36707) | 36707..37543 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| PQP95_RS22965 (37543) | 37543..38346 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| PQP95_RS22970 (38407) | 38407..39222 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| PQP95_RS22975 (39384) | 39384..40244 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| PQP95_RS22980 (40427) | 40427..40657 | - | 231 | Protein_46 | helix-turn-helix domain-containing protein | - |
| PQP95_RS22985 (40720) | 40720..41424 | + | 705 | WP_274891467.1 | IS6-like element IS26 family transposase | - |
| PQP95_RS22990 (41476) | 41476..42795 | + | 1320 | Protein_48 | reverse transcriptase domain-containing protein | - |
| PQP95_RS22995 (42872) | 42872..43774 | + | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| PQP95_RS23000 (43771) | 43771..44082 | + | 312 | WP_010891263.1 | hypothetical protein | - |
| PQP95_RS23005 (44159) | 44159..44842 | + | 684 | WP_000086178.1 | DNA methylase | - |
| PQP95_RS23010 (44843) | 44843..45064 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| PQP95_RS23015 (45024) | 45024..45510 | + | 487 | Protein_53 | DUF1380 family protein | - |
| PQP95_RS23020 (45561) | 45561..46331 | + | 771 | WP_001044393.1 | hypothetical protein | - |
| PQP95_RS23025 (46749) | 46749..47174 | + | 426 | WP_001198886.1 | antirestriction protein | - |
| PQP95_RS23030 (47221) | 47221..47643 | + | 423 | WP_000271729.1 | DUF1380 family protein | - |
| PQP95_RS23035 (47640) | 47640..47831 | + | 192 | WP_001027500.1 | hypothetical protein | - |
| PQP95_RS23040 (48601) | 48601..49128 | + | 528 | WP_001276110.1 | single-stranded DNA-binding protein | - |
| PQP95_RS23045 (49186) | 49186..49419 | + | 234 | WP_000006014.1 | DUF905 domain-containing protein | - |
| PQP95_RS23050 (49478) | 49478..51436 | + | 1959 | WP_001145453.1 | ParB/RepB/Spo0J family partition protein | - |
| PQP95_RS23055 (51491) | 51491..51925 | + | 435 | WP_000845899.1 | conjugation system SOS inhibitor PsiB | - |
| PQP95_RS23060 (51922) | 51922..52641 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| PQP95_RS23065 (52638) | 52638..53234 | + | 597 | WP_000977995.1 | hypothetical protein | - |
| PQP95_RS23070 (53696) | 53696..54196 | + | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| PQP95_RS23075 (54925) | 54925..55359 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| PQP95_RS23080 (55453) | 55453..55719 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| PQP95_RS23085 (55784) | 55784..56710 | + | 927 | WP_000038402.1 | ISNCY family transposase ISRor2 | VF |
| PQP95_RS23090 (56733) | 56733..56930 | + | 198 | WP_001348086.1 | hypothetical protein | - |
| PQP95_RS23095 (56961) | 56961..57212 | - | 252 | WP_000148284.1 | helix-turn-helix transcriptional regulator | - |
| PQP95_RS23100 (57792) | 57792..58640 | + | 849 | WP_001077023.1 | DUF4942 domain-containing protein | - |
| PQP95_RS23105 (58726) | 58726..59061 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| PQP95_RS23110 (59295) | 59295..59627 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| PQP95_RS23115 (59638) | 59638..62337 | + | 2700 | WP_274891448.1 | hypothetical protein | Relaxase |
| PQP95_RS23120 (62374) | 62374..64665 | - | 2292 | WP_001289282.1 | F-type conjugative transfer protein TrbC | - |
| PQP95_RS23125 (64658) | 64658..65728 | - | 1071 | WP_000151582.1 | IncI1-type conjugal transfer protein TrbB | - |
| PQP95_RS23130 (65747) | 65747..66955 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (67135) | 67135..67195 | - | 61 | NuclAT_1 | - | - |
| - (67135) | 67135..67195 | - | 61 | NuclAT_1 | - | - |
| - (67135) | 67135..67195 | - | 61 | NuclAT_1 | - | - |
| - (67135) | 67135..67195 | - | 61 | NuclAT_1 | - | - |
| PQP95_RS23135 (67262) | 67262..68041 | - | 780 | WP_275450201.1 | protein FinQ | - |
| - (68556) | 68556..68618 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (68556) | 68556..68618 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (68556) | 68556..68618 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (68556) | 68556..68618 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| PQP95_RS23140 (68668) | 68668..68820 | + | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| PQP95_RS23145 (68892) | 68892..69143 | - | 252 | WP_001291965.1 | hypothetical protein | - |
| - (69530) | 69530..69581 | - | 52 | NuclAT_2 | - | - |
| - (69530) | 69530..69581 | - | 52 | NuclAT_2 | - | - |
| - (69530) | 69530..69581 | - | 52 | NuclAT_2 | - | - |
| - (69530) | 69530..69581 | - | 52 | NuclAT_2 | - | - |
| PQP95_RS23150 (70067) | 70067..70243 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| PQP95_RS23155 (70452) | 70452..70661 | - | 210 | WP_001140545.1 | hemolysin expression modulator Hha | - |
| PQP95_RS23160 (70759) | 70759..71373 | - | 615 | WP_000578649.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| PQP95_RS23165 (71449) | 71449..73617 | - | 2169 | WP_000698360.1 | IncI1-type conjugal transfer membrane protein TraY | - |
| PQP95_RS23170 (73714) | 73714..74298 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| PQP95_RS23175 (74327) | 74327..75529 | - | 1203 | WP_001189159.1 | IncI1-type conjugal transfer protein TraW | - |
| PQP95_RS23180 (75496) | 75496..76110 | - | 615 | WP_000337394.1 | IncI1-type conjugal transfer protein TraV | - |
| PQP95_RS23185 (76110) | 76110..79154 | - | 3045 | WP_001024752.1 | IncI1-type conjugal transfer protein TraU | - |
| PQP95_RS23190 (79244) | 79244..80044 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| PQP95_RS23195 (80028) | 80028..80216 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| PQP95_RS23200 (80280) | 80280..80684 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| PQP95_RS23205 (80735) | 80735..81262 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| PQP95_RS23210 (81262) | 81262..81966 | - | 705 | WP_274891452.1 | IncI1-type conjugal transfer protein TraP | - |
| PQP95_RS23215 (81966) | 81966..83255 | - | 1290 | WP_001271997.1 | conjugal transfer protein TraO | - |
| PQP95_RS23220 (83258) | 83258..84241 | - | 984 | WP_001191878.1 | hypothetical protein | VF |
| PQP95_RS23225 (84252) | 84252..84944 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| PQP95_RS23230 (84941) | 84941..85288 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| PQP95_RS23235 (85306) | 85306..89073 | - | 3768 | WP_001141534.1 | DUF5710 domain-containing protein | - |
| PQP95_RS23240 (89163) | 89163..89714 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| PQP95_RS23245 (89729) | 89729..90019 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| PQP95_RS23250 (90016) | 90016..91164 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| PQP95_RS23255 (91161) | 91161..91979 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| PQP95_RS23260 (91976) | 91976..92434 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| PQP95_RS23265 (92829) | 92829..93413 | - | 585 | WP_137559097.1 | histidine phosphatase family protein | - |
| PQP95_RS23270 (93473) | 93473..94675 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| PQP95_RS23275 (94761) | 94761..95585 | - | 825 | WP_001238927.1 | conjugal transfer protein TraE | - |
| PQP95_RS23280 (95736) | 95736..96890 | - | 1155 | WP_001139958.1 | site-specific integrase | - |
| PQP95_RS23285 (98375) | 98375..99652 | - | 1278 | WP_274891461.1 | hypothetical protein | VF |
| PQP95_RS23290 (99652) | 99652..100308 | - | 657 | WP_001389386.1 | hypothetical protein | VF |
| PQP95_RS23295 (100293) | 100293..100853 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| PQP95_RS23300 (100863) | 100863..101477 | - | 615 | WP_000959786.1 | hypothetical protein | VF |
| PQP95_RS23305 (101495) | 101495..102592 | - | 1098 | WP_274891462.1 | hypothetical protein | VF |
| PQP95_RS23310 (102605) | 102605..104158 | - | 1554 | WP_274891463.1 | hypothetical protein | VF |
| PQP95_RS23315 (104169) | 104169..104621 | - | 453 | WP_001247334.1 | hypothetical protein | VF |
| PQP95_RS23320 (104608) | 104608..105903 | - | 1296 | WP_000752772.1 | hypothetical protein | VF |
| PQP95_RS23325 (105896) | 105896..107578 | - | 1683 | WP_000748143.1 | hypothetical protein | VF |
| PQP95_RS23330 (107592) | 107592..108029 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| PQP95_RS23335 (108029) | 108029..109096 | - | 1068 | WP_001302629.1 | hypothetical protein | VF |
| PQP95_RS23340 (109720) | 109720..110016 | - | 297 | WP_000494779.1 | hypothetical protein | - |
| PQP95_RS23345 (110192) | 110192..110446 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| PQP95_RS23350 (110608) | 110608..111159 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| PQP95_RS23355 (111332) | 111332..112015 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| PQP95_RS23360 (112269) | 112269..112802 | - | 534 | WP_001372168.1 | transcription termination/antitermination NusG family protein | - |
| PQP95_RS23365 (113244) | 113244..113531 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| PQP95_RS23370 (113449) | 113449..113727 | - | 279 | WP_219065241.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|