MGE detailed information
MGE type: Genomic_island MGE length: 10427 bp
Accession: NZ_CP117244 Location: 990081..1000507 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain ATCC 14028 Replicon: chromosome
Accession: NZ_CP117244 Location: 990081..1000507 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain ATCC 14028 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ30_RS04720 (985194) | 985194..985574 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| PQQ30_RS04725 (985630) | 985630..988197 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| PQQ30_RS04730 (988356) | 988356..988877 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| PQQ30_RS04735 (989049) | 989049..989705 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| PQQ30_RS04740 (990052) | 990052..990257 | + | 206 | Protein_929 | IS5 family transposase ISEcl3 | Transposase |
| PQQ30_RS04745 (990330) | 990330..990857 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| PQQ30_RS04750 (990854) | 990854..991144 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| PQQ30_RS04755 (991414) | 991414..991592 | - | 179 | Protein_932 | IS3 family transposase | - |
| PQQ30_RS04760 (991833) | 991833..992159 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| PQQ30_RS04765 (992432) | 992432..992779 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| PQQ30_RS04770 (992764) | 992764..993213 | - | 450 | WP_000381610.1 | membrane protein | - |
| PQQ30_RS04775 (993644) | 993644..994087 | - | 444 | WP_000715092.1 | Type 3 secretion system pilotin | VF |
| PQQ30_RS04780 (994544) | 994544..995194 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| PQQ30_RS04785 (995191) | 995191..996879 | + | 1689 | WP_000848113.1 | Type 3 secretion system secretin | VF |
| PQQ30_RS04790 (996876) | 996876..997994 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| PQQ30_RS04795 (998019) | 998019..1000076 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| PQQ30_RS04800 (1000100) | 1000100..1000507 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| PQQ30_RS04805 (1000504) | 1000504..1001799 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| PQQ30_RS04810 (1001777) | 1001777..1002220 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| PQQ30_RS04815 (1002220) | 1002220..1003230 | + | 1011 | WP_000503098.1 | SPI-1 type III secretion system protein SpaN | - |
| PQQ30_RS04820 (1003230) | 1003230..1004141 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| PQQ30_RS04825 (1004131) | 1004131..1004805 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| PQQ30_RS04830 (1004831) | 1004831..1005091 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0 |