MGE detailed information
MGE type: Genomic_island MGE length: 12086 bp
Accession: NZ_CP117244 Location: 2416860..2428945 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain ATCC 14028 Replicon: chromosome
Accession: NZ_CP117244 Location: 2416860..2428945 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain ATCC 14028 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ30_RS11785 (2412781) | 2412781..2413983 | - | 1203 | WP_000347159.1 | MalY/PatB family protein | - |
| PQQ30_RS11790 (2413996) | 2413996..2415447 | - | 1452 | WP_001276616.1 | Na+/H+ antiporter NhaC | - |
| PQQ30_RS11795 (2415591) | 2415591..2416598 | - | 1008 | WP_000201080.1 | LacI family DNA-binding transcriptional regulator | - |
| PQQ30_RS11800 (2416857) | 2416857..2418323 | + | 1467 | WP_000987828.1 | hypothetical protein | - |
| PQQ30_RS11805 (2419131) | 2419131..2419845 | + | 715 | Protein_2308 | helix-turn-helix domain-containing protein | - |
| PQQ30_RS11810 (2419901) | 2419901..2420809 | - | 909 | WP_010989018.1 | hypothetical protein | - |
| PQQ30_RS11815 (2420952) | 2420952..2421284 | - | 333 | WP_000253154.1 | DUF1493 family protein | - |
| PQQ30_RS11820 (2421274) | 2421274..2421489 | - | 216 | WP_000206207.1 | hypothetical protein | - |
| PQQ30_RS11825 (2421641) | 2421641..2421889 | + | 249 | WP_000885424.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PQQ30_RS11830 (2421879) | 2421879..2422163 | + | 285 | WP_000221343.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PQQ30_RS11835 (2422334) | 2422334..2422723 | + | 390 | WP_000194089.1 | RidA family protein | - |
| PQQ30_RS11840 (2422775) | 2422775..2423854 | - | 1080 | WP_000954688.1 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | - |
| PQQ30_RS11845 (2424047) | 2424047..2424535 | - | 489 | WP_001293638.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| PQQ30_RS11850 (2424580) | 2424580..2426088 | + | 1509 | WP_000199411.1 | FAD-dependent oxidoreductase | - |
| PQQ30_RS11855 (2426078) | 2426078..2427319 | + | 1242 | WP_001095738.1 | MFS transporter | - |
| PQQ30_RS11860 (2427389) | 2427389..2428945 | + | 1557 | WP_000476912.1 | PhoPQ-activated pathogenicity-related family protein | - |
| PQQ30_RS11865 (2429122) | 2429122..2430408 | + | 1287 | WP_000824240.1 | MFS transporter | - |
| PQQ30_RS11870 (2430383) | 2430383..2431408 | + | 1026 | WP_000864924.1 | zinc-binding alcohol dehydrogenase family protein | - |
| PQQ30_RS11875 (2431467) | 2431467..2432258 | - | 792 | WP_001518759.1 | FadR/GntR family transcriptional regulator | - |
| PQQ30_RS11880 (2432304) | 2432304..2433395 | - | 1092 | WP_000976498.1 | linear amide C-N hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297233 | UFRD01000002 | 1156436..1168519 | 0 |