MGE detailed information
MGE type: Prophage MGE length: 42322 bp
Accession: NZ_CP117242 Location: 320324..362645 Organism: Staphylococcus aureus strain ATCC 14458 Replicon: chromosome
Accession: NZ_CP117242 Location: 320324..362645 Organism: Staphylococcus aureus strain ATCC 14458 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ25_RS01700 (315773) | 315773..316441 | + | 669 | WP_000936720.1 | N-acetylmannosamine-6-phosphate 2-epimerase | - |
| PQQ25_RS01705 (316568) | 316568..317881 | - | 1314 | WP_001077722.1 | YjiH family protein | - |
| PQQ25_RS01710 (318299) | 318299..320230 | + | 1932 | Protein_281 | YSIRK domain-containing triacylglycerol lipase Lip2/Geh | - |
| PQQ25_RS01715 (320324) | 320324..321529 | - | 1206 | WP_000264186.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PQQ25_RS01720 (321640) | 321640..321819 | + | 180 | WP_000337827.1 | hypothetical protein | - |
| PQQ25_RS01725 (321799) | 321799..322731 | - | 933 | WP_000392183.1 | hypothetical protein | - |
| PQQ25_RS01730 (322763) | 322763..323227 | - | 465 | WP_000525007.1 | hypothetical protein | Toxin Detail |
| PQQ25_RS01735 (323240) | 323240..323554 | - | 315 | WP_000333630.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| PQQ25_RS01740 (323706) | 323706..323942 | + | 237 | WP_001121116.1 | helix-turn-helix transcriptional regulator | - |
| PQQ25_RS01745 (323956) | 323956..324135 | + | 180 | WP_000438352.1 | hypothetical protein | - |
| PQQ25_RS01750 (324236) | 324236..324718 | - | 483 | WP_000394410.1 | hypothetical protein | - |
| PQQ25_RS01755 (324778) | 324778..325527 | + | 750 | WP_001148586.1 | phage antirepressor KilAC domain-containing protein | - |
| PQQ25_RS01760 (325543) | 325543..325641 | + | 99 | Protein_291 | hypothetical protein | - |
| PQQ25_RS01765 (325791) | 325791..326054 | + | 264 | WP_001124198.1 | helix-turn-helix domain-containing protein | - |
| PQQ25_RS01770 (326066) | 326066..326227 | + | 162 | WP_000066021.1 | DUF1270 family protein | - |
| PQQ25_RS01775 (326319) | 326319..326579 | + | 261 | WP_000291089.1 | DUF1108 family protein | - |
| PQQ25_RS01780 (326589) | 326589..326810 | + | 222 | WP_000815401.1 | DUF2483 family protein | - |
| PQQ25_RS01785 (326803) | 326803..327591 | + | 789 | WP_000134097.1 | ATP-binding protein | - |
| PQQ25_RS01790 (327620) | 327620..328171 | + | 552 | WP_000704705.1 | single-stranded DNA-binding protein | - |
| PQQ25_RS01795 (328184) | 328184..328855 | + | 672 | WP_001199439.1 | putative HNHc nuclease | - |
| PQQ25_RS01800 (328961) | 328961..329818 | - | 858 | WP_000371250.1 | DUF4393 domain-containing protein | - |
| PQQ25_RS01805 (329883) | 329883..330653 | + | 771 | WP_000190223.1 | conserved phage C-terminal domain-containing protein | - |
| PQQ25_RS01810 (330663) | 330663..331442 | + | 780 | WP_000803062.1 | ATP-binding protein | - |
| PQQ25_RS01815 (331436) | 331436..331594 | + | 159 | WP_000256597.1 | hypothetical protein | - |
| PQQ25_RS01820 (331607) | 331607..331828 | + | 222 | WP_001123684.1 | DUF3269 family protein | - |
| PQQ25_RS01825 (331838) | 331838..332245 | + | 408 | WP_000401950.1 | RusA family crossover junction endodeoxyribonuclease | - |
| PQQ25_RS01830 (332245) | 332245..332430 | + | 186 | WP_001187264.1 | DUF3113 family protein | - |
| PQQ25_RS01835 (332431) | 332431..332790 | + | 360 | WP_000117792.1 | SA1788 family PVL leukocidin-associated protein | - |
| PQQ25_RS01840 (332790) | 332790..333044 | + | 255 | WP_000022735.1 | DUF3310 domain-containing protein | - |
| PQQ25_RS01845 (333044) | 333044..333292 | + | 249 | WP_012068339.1 | SAV1978 family virulence-associated passenger protein | - |
| PQQ25_RS01850 (333307) | 333307..333708 | + | 402 | WP_000695747.1 | hypothetical protein | - |
| PQQ25_RS01855 (333705) | 333705..333899 | + | 195 | WP_000983954.1 | hypothetical protein | - |
| PQQ25_RS01860 (333896) | 333896..334345 | + | 450 | WP_000982708.1 | YopX family protein | - |
| PQQ25_RS01865 (334342) | 334342..334626 | + | 285 | WP_001105621.1 | hypothetical protein | - |
| PQQ25_RS01870 (334619) | 334619..334867 | + | 249 | WP_001065083.1 | DUF1024 family protein | - |
| PQQ25_RS01875 (334860) | 334860..335396 | + | 537 | WP_000185669.1 | dUTP diphosphatase | - |
| PQQ25_RS01880 (335433) | 335433..335639 | + | 207 | WP_000195799.1 | DUF1381 domain-containing protein | - |
| PQQ25_RS01885 (335636) | 335636..335830 | + | 195 | WP_000132919.1 | hypothetical protein | - |
| PQQ25_RS01890 (335827) | 335827..336030 | + | 204 | WP_001072795.1 | hypothetical protein | - |
| PQQ25_RS01895 (336023) | 336023..336259 | + | 237 | WP_000608279.1 | hypothetical protein | - |
| PQQ25_RS01900 (336249) | 336249..336638 | + | 390 | WP_001580341.1 | hypothetical protein | - |
| PQQ25_RS01905 (336635) | 336635..336808 | + | 174 | WP_000595257.1 | transcriptional activator RinB | - |
| PQQ25_RS01910 (336809) | 336809..337210 | + | 402 | WP_000286968.1 | hypothetical protein | - |
| PQQ25_RS01915 (337561) | 337561..338055 | + | 495 | WP_000594088.1 | terminase small subunit | - |
| PQQ25_RS01920 (338048) | 338048..339271 | + | 1224 | WP_001037578.1 | PBSX family phage terminase large subunit | - |
| PQQ25_RS01925 (339268) | 339268..340692 | + | 1425 | WP_044556788.1 | phage portal protein | - |
| PQQ25_RS01930 (340661) | 340661..341614 | + | 954 | WP_000184135.1 | phage head morphogenesis protein | - |
| PQQ25_RS01935 (341616) | 341616..341822 | + | 207 | WP_000346033.1 | hypothetical protein | - |
| PQQ25_RS01940 (341925) | 341925..342509 | + | 585 | WP_001019219.1 | DUF4355 domain-containing protein | - |
| PQQ25_RS01945 (342526) | 342526..343440 | + | 915 | WP_000235168.1 | phage major capsid protein | - |
| PQQ25_RS01950 (343452) | 343452..343595 | + | 144 | WP_000002929.1 | hypothetical protein | - |
| PQQ25_RS01955 (343601) | 343601..343951 | + | 351 | WP_000177352.1 | hypothetical protein | - |
| PQQ25_RS01960 (343963) | 343963..344298 | + | 336 | WP_000483040.1 | phage head closure protein | - |
| PQQ25_RS01965 (344285) | 344285..344698 | + | 414 | WP_001151330.1 | HK97 gp10 family phage protein | - |
| PQQ25_RS01970 (344711) | 344711..345136 | + | 426 | WP_000270192.1 | DUF3168 domain-containing protein | - |
| PQQ25_RS01975 (345137) | 345137..345694 | + | 558 | WP_000057582.1 | tail protein | - |
| PQQ25_RS01980 (345761) | 345761..346267 | + | 507 | WP_000134337.1 | tail assembly chaperone | - |
| PQQ25_RS01985 (346312) | 346312..346596 | + | 285 | WP_000880587.1 | hypothetical protein | - |
| PQQ25_RS01990 (346600) | 346600..349743 | + | 3144 | WP_000379457.1 | terminase | - |
| PQQ25_RS01995 (349758) | 349758..350699 | + | 942 | WP_000560181.1 | phage tail family protein | - |
| PQQ25_RS02000 (350710) | 350710..352596 | + | 1887 | WP_001122001.1 | SGNH/GDSL hydrolase family protein | - |
| PQQ25_RS02005 (352609) | 352609..354507 | + | 1899 | WP_000323259.1 | hypothetical protein | - |
| PQQ25_RS02010 (354507) | 354507..356330 | + | 1824 | WP_000634521.1 | phage baseplate upper protein | - |
| PQQ25_RS02015 (356330) | 356330..356707 | + | 378 | WP_000705893.1 | DUF2977 domain-containing protein | - |
| PQQ25_RS02020 (356711) | 356711..356884 | + | 174 | WP_001790193.1 | XkdX family protein | - |
| PQQ25_RS02025 (356925) | 356925..357224 | + | 300 | WP_000466769.1 | DUF2951 domain-containing protein | - |
| PQQ25_RS02030 (357361) | 357361..359235 | + | 1875 | WP_000524043.1 | hypothetical protein | VF |
| PQQ25_RS02035 (359248) | 359248..360420 | + | 1173 | WP_000276627.1 | BppU family phage baseplate upper protein | - |
| PQQ25_RS02040 (360426) | 360426..360821 | + | 396 | WP_000398878.1 | hypothetical protein | - |
| PQQ25_RS02045 (360877) | 360877..361179 | + | 303 | WP_000339146.1 | phage holin | - |
| PQQ25_RS02050 (361191) | 361191..362645 | + | 1455 | WP_000930256.1 | N-acetylmuramoyl-L-alanine amidase | - |
| PQQ25_RS02055 (363415) | 363415..363537 | + | 123 | WP_000346420.1 | hypothetical protein | - |
| PQQ25_RS02060 (363779) | 363779..364606 | - | 828 | WP_000136020.1 | alpha/beta hydrolase | - |
| PQQ25_RS02065 (364679) | 364679..365878 | - | 1200 | WP_000286484.1 | NADH-dependent flavin oxidoreductase | - |
| PQQ25_RS02070 (365974) | 365974..366066 | + | 93 | WP_001801779.1 | hypothetical protein | - |
| PQQ25_RS02075 (366180) | 366180..367181 | + | 1002 | WP_000240058.1 | LLM class flavin-dependent oxidoreductase | - |
| PQQ25_RS02080 (367215) | 367215..367547 | + | 333 | WP_000731878.1 | glycine cleavage system protein H | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus str. Newman | Prophage | TA4244 | NC_009641 | 320846..363190 | 0.003 |