MGE detailed information
MGE type: Genomic_island MGE length: 10488 bp
Accession: NZ_CP117235 Location: 4033067..4043554 Organism: Escherichia coli strain ATCC 25922 Replicon: chromosome
Accession: NZ_CP117235 Location: 4033067..4043554 Organism: Escherichia coli strain ATCC 25922 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ28_RS19855 (4029042) | 4029042..4029494 | + | 453 | WP_000682723.1 | hypothetical protein | - |
| PQQ28_RS19860 (4029612) | 4029612..4029845 | + | 234 | WP_001213776.1 | DUF905 family protein | - |
| PQQ28_RS19865 (4029945) | 4029945..4030766 | + | 822 | WP_001234359.1 | DUF932 domain-containing protein | - |
| PQQ28_RS19870 (4030766) | 4030766..4031011 | + | 246 | WP_001164966.1 | hypothetical protein | - |
| PQQ28_RS19875 (4031105) | 4031105..4031578 | + | 474 | WP_001313575.1 | antirestriction protein | - |
| PQQ28_RS19880 (4031594) | 4031594..4032070 | + | 477 | WP_001313574.1 | RadC family protein | - |
| PQQ28_RS19885 (4032133) | 4032133..4032354 | + | 222 | WP_000692315.1 | DUF987 domain-containing protein | - |
| PQQ28_RS19890 (4032373) | 4032373..4033017 | + | 645 | WP_000086761.1 | hypothetical protein | - |
| PQQ28_RS19895 (4033067) | 4033067..4033441 | + | 375 | WP_001285481.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| PQQ28_RS19900 (4033488) | 4033488..4033865 | + | 378 | WP_000854730.1 | TA system toxin CbtA family protein | Toxin Detail |
| PQQ28_RS19905 (4033862) | 4033862..4034354 | + | 493 | Protein_3831 | DUF5983 family protein | - |
| PQQ28_RS19910 (4034433) | 4034433..4035421 | - | 989 | Protein_3832 | IS630 family transposase IS630 | Transposase |
| PQQ28_RS19915 (4035569) | 4035569..4035757 | - | 189 | Protein_3833 | IS66 family transposase | - |
| PQQ28_RS19920 (4035818) | 4035818..4036951 | + | 1134 | WP_000555401.1 | IS110 family transposase ISEc45 | Transposase |
| PQQ28_RS19925 (4037205) | 4037205..4038609 | - | 1405 | Protein_3835 | IS66 family transposase ISEc47 | Transposase |
| PQQ28_RS19930 (4038640) | 4038640..4038990 | - | 351 | WP_000624707.1 | IS66 family transposase IS682 | Transposase |
| PQQ28_RS19935 (4038987) | 4038987..4039278 | - | 292 | Protein_3837 | IS66 family transposase ISEc43 | Transposase |
| PQQ28_RS19940 (4039320) | 4039320..4039514 | + | 195 | WP_001313570.1 | DUF957 domain-containing protein | - |
| PQQ28_RS19945 (4039596) | 4039596..4040453 | + | 858 | Protein_3839 | DUF4942 domain-containing protein | - |
| PQQ28_RS19955 (4040783) | 4040783..4041514 | - | 732 | WP_001308374.1 | DNA polymerase III subunit epsilon | - |
| PQQ28_RS19960 (4041579) | 4041579..4042046 | + | 468 | WP_000917878.1 | ribonuclease HI | - |
| PQQ28_RS19965 (4042043) | 4042043..4042765 | - | 723 | WP_001295200.1 | class I SAM-dependent methyltransferase | - |
| PQQ28_RS19970 (4042799) | 4042799..4043554 | + | 756 | WP_001052735.1 | hydroxyacylglutathione hydrolase | - |
| PQQ28_RS19975 (4043626) | 4043626..4044984 | + | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| PQQ28_RS19980 (4045033) | 4045033..4045803 | - | 771 | WP_000211716.1 | class I SAM-dependent methyltransferase | - |
| PQQ28_RS19985 (4045881) | 4045881..4046681 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| PQQ28_RS19990 (4046922) | 4046922..4047836 | + | 915 | WP_000648563.1 | DNA-binding transcriptional regulator YafC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli Nissle 1917 | Genomic island | TA47027 | NZ_CP007799 | 243683..255832 | 0.007 |